FC929073

Overview
NameFC929073
Unique NameFC929073
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length395
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929073 vs. ExPASy Swiss-Prot
Match: DAPL_LACS1 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=dapL PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.398e-17
Identity = 48/133 (36.09%), Postives = 71/133 (53.38%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSXVVTVAKF 393
            +T+ LG       HR   K  +  +FQPAEE   G  K+ ++G L++   + I+ LH +P LP G +  R G L AG+        GK GHAA P  + D ++A +  +  +Q +VSR  DP+ S VVT+  F
Sbjct:  102 MTVALGVLSYFASHRP--KYNMTFIFQPAEENASGGMKLYQSGELDEWMPDEIYALHDNPQLPAGTIGCRKGTLFAGTCEIHVKFIGKSGHAAYPHQANDMVVAGAQFVNQIQTIVSRNVDPIQSVVVTLGHF 232          
BLAST of FC929073 vs. ExPASy Swiss-Prot
Match: DAPL_LACLS (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=dapL PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.384e-17
Identity = 49/132 (37.12%), Postives = 74/132 (56.06%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSXVVTVAK 390
            +T+ LG  + L E +   K  ++ +FQPAEE   G   + + G  +    +  +GLHV P+L +G++A+    L AG+   E    G GGHAA P  + D ++AA+  +  +Q +VSR  DPLDS VVT  K
Sbjct:   99 MTVALGLLEKLSESQP--KNNLLFLFQPAEENEAGGKLMYDGGAFKNWLPDEFYGLHVRPDLKVGDIATNEQTLFAGTCEVELTFVGTGGHAAFPHTANDALVAAAYFVTQVQTIVSRNVDPLDSAVVTFGK 228          
BLAST of FC929073 vs. ExPASy Swiss-Prot
Match: DAPL_LACLM (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=dapL PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.384e-17
Identity = 49/132 (37.12%), Postives = 74/132 (56.06%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSXVVTVAK 390
            +T+ LG  + L E +   K  ++ +FQPAEE   G   + + G  +    +  +GLHV P+L +G++A+    L AG+   E    G GGHAA P  + D ++AA+  +  +Q +VSR  DPLDS VVT  K
Sbjct:   99 MTVALGLLEKLSESQP--KNNLLFLFQPAEENEAGGKLMYDGGAFKNWLPDEFYGLHVRPDLKVGDIATNEQTLFAGTCEVELTFVGTGGHAAFPHTANDALVAAAYFVTQVQTIVSRNVDPLDSAVVTFGK 228          
BLAST of FC929073 vs. ExPASy Swiss-Prot
Match: DAPL_LACCB (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus casei (strain BL23) GN=dapL PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.183e-16
Identity = 47/130 (36.15%), Postives = 72/130 (55.38%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSXVVT 381
            +T+ LG      EH+   K  ++  FQPAEE   G     + G       ++  +GLH  P+LP G +++R G L AG+      + GK GHAA+PQ++ D I+AA++ I  +Q +V+R   P DS V+T
Sbjct:  103 MTVALGILSYFAEHQP--KDNLIFFFQPAEESKNGGKLAYDMGAFTGDWHIDEFYGLHDRPDLPAGTISTRLGTLFAGTTEINVDLIGKSGHAALPQNANDMIVAAASFISQIQTVVARNVGPTDSAVIT 230          
BLAST of FC929073 vs. ExPASy Swiss-Prot
Match: DAPL_LACC3 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus casei (strain ATCC 334) GN=dapL PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.183e-16
Identity = 47/130 (36.15%), Postives = 72/130 (55.38%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSXVVT 381
            +T+ LG      EH+   K  ++  FQPAEE   G     + G       ++  +GLH  P+LP G +++R G L AG+      + GK GHAA+PQ++ D I+AA++ I  +Q +V+R   P DS V+T
Sbjct:  103 MTVALGILSYFAEHQP--KDNLIFFFQPAEESKNGGKLAYDMGAFTGDWHIDEFYGLHDRPDLPAGTISTRLGTLFAGTTEINVDLIGKSGHAALPQNANDMIVAAASFISQIQTVVARNVGPTDSAVIT 230          
BLAST of FC929073 vs. ExPASy Swiss-Prot
Match: DAPL_PEDPA (Putative N-acetyldiaminopimelate deacetylase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=dapL PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.546e-16
Identity = 45/133 (33.83%), Postives = 72/133 (54.14%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSXVVTVAK 390
            +T+ LG  +    H+ +    ++  FQPAEE   G+ +   A +     + N  +GLH  P LP G +  R G L AG+      + GKGGHAA PQ + D ++A + +I  LQ +V+R  +P++  V+T+ K
Sbjct:  105 MTVALGILEYFANHQPQ--DNLIFFFQPAEESHSGSVRAFNANIFTNQFRPNEFYGLHSTPTLPAGVIGCRMGTLFAGTTEVNLKLTGKGGHAAYPQDANDMVVAQAYLITQLQTIVARNVNPIEGGVLTLGK 235          
BLAST of FC929073 vs. ExPASy Swiss-Prot
Match: DAPL_LACF3 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=dapL PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.636e-16
Identity = 45/133 (33.83%), Postives = 75/133 (56.39%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSXVVTVAK 390
            +T+ LG       H+   K  ++  FQPAEE   G  +  E G+ E   + +  +GLH +P L  G +  R G L AG+   +  + GK GHAA PQ + D ++AA+ +I+ +Q ++SR  +P+++ V+T+ K
Sbjct:  104 MTVALGVLDYFASHQP--KDNLLFFFQPAEESEAGGQRAYELGLFEGKWRPDEFYGLHDNPALKTGVIGCRLGTLFAGTTEVDIDVLGKDGHAAFPQEANDAVVAAAALIMQVQTIISRSINPVEAGVITLGK 234          
BLAST of FC929073 vs. ExPASy Swiss-Prot
Match: DAPL_STRZT (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=dapL PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.443e-16
Identity = 48/133 (36.09%), Postives = 74/133 (55.64%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSXVVTVAKF 393
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + EAG       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT   F
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEAGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVF 230          
BLAST of FC929073 vs. ExPASy Swiss-Prot
Match: DAPL_ENTFA (Putative N-acetyldiaminopimelate deacetylase OS=Enterococcus faecalis GN=dapL PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 3.443e-16
Identity = 48/133 (36.09%), Postives = 73/133 (54.89%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSXVVTVAKF 393
            +T+ LG  K L + + +     + +FQPAEE   G   + E     +   +  + LHV+P+LP+G +++R G L A +      + GKGGHAA P  + D +LAA+N+I   Q +VSR  DP+   VVT   F
Sbjct:  103 MTIGLGVLKELSQQQPD--NNFLFLFQPAEENEAGGMLMYEDHAFGEWLPDEFYALHVNPDLPVGTISTRVGTLFAATCEVNITLKGKGGHAAFPHQANDMVLAATNLIQQAQTIVSRNVDPVVGAVVTFGTF 233          
BLAST of FC929073 vs. ExPASy Swiss-Prot
Match: DAPL_STRPS (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain CGSP14) GN=dapL PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.497e-16
Identity = 48/133 (36.09%), Postives = 73/133 (54.89%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSXVVTVAKF 393
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       N  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT   F
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPNQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVF 230          
The following BLAST results are available for this feature:
BLAST of FC929073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
DAPL_LACS11.398e-1736.09Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACLS2.384e-1737.12Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACLM2.384e-1737.12Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACCB1.183e-1636.15Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACC31.183e-1636.15Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_PEDPA1.546e-1633.83Putative N-acetyldiaminopimelate deacetylase OS=Pe... [more]
DAPL_LACF32.636e-1633.83Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_STRZT3.443e-1636.09Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_ENTFA3.443e-1636.09Putative N-acetyldiaminopimelate deacetylase OS=En... [more]
DAPL_STRPS4.497e-1636.09Putative N-acetyldiaminopimelate deacetylase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DE12RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DE12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929073 ID=FC929073; Name=FC929073; organism=Citrus clementina; type=EST; length=395bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACANGTCGTGACAGTTGCAAAATTTCA
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