FC929077

Overview
NameFC929077
Unique NameFC929077
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 8.152e-57
Identity = 115/237 (48.52%), Postives = 159/237 (67.09%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSG-KNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGS 707
            EF NE+ +++ LQH NLVK+ G C+EG++ +LVYE++ N SL H LF     ++KL+W  R KI  GIARG+ +LH++SR  I+HRD+KA N+LLD D+NPKI+DFG+A++   ++T   T RV GT GYM+PEYA++G  + K+DVYSFGV+ LEI+SG KN+  Y  D +    + + + L  +G+  ELVDP  G  +   E  R I IALLC       RPTMS +V ML  S
Sbjct:  366 EFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDS-TMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGMKNSSLYQMDESVGNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQMLTTS 601          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.177e-55
Identity = 115/238 (48.32%), Postives = 160/238 (67.23%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY-VPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF NE+ +++ LQH NLVK+ G C+EG++ +LVYE++ N SL + LF     Q +L+W  R KI  GIARG+ +LH++SR  I+HRD+KA N+LLD D+NPK++DFG+A++   ++T  +T RV GT GYMAPEYA++G  + K+DVYSFGV+ LEIVSG  N S    D + +  + + + L  +G+  ELVDP  G  +   E  R I IALLC     + RPTMS +V ML  SS
Sbjct:  384 EFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFD-PTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQMDGSISNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDANDRPTMSAIVQMLTTSS 620          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.537e-55
Identity = 115/241 (47.72%), Postives = 164/241 (68.05%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKT---HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK--NNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF NEI +++ LQH NLV++ G C++G++ LLVYE+++N SL   +F  E  QL L+W VR K+  GIARGL +LHE+SRF+I+HRD+KA+N+LLD+++NPKI+DFGLAKL +  +T     ++R+AGT GYMAPEYA+ G  + K DV+SFGV+ +EI++GK  NN     D +    L W +   R  T++ ++DP L +  ++ E  R I I LLC   S + RPTM+ V  ML   S
Sbjct:  397 EFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKRQL-LDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSL-TAGSRNEILRCIHIGLLCVQESAATRPTMATVSLMLNSYS 635          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 2.622e-55
Identity = 110/240 (45.83%), Postives = 160/240 (66.67%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL---DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFN-KVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF+NE+++++ LQH NLV++ G C++G++ +L+YE+ +N SL H +F   N ++ L+W  R +I  G+ARGL +LHE+SRFKIVHRD+KA+NVLLD  +NPKI+DFG+AKL   D+  +T  +++VAGT GYMAPEYA+ G  + K DV+SFGV+ LEI+ GK N     + +    L + +   R G ++ +VDP L        E  + I I LLC   +   RPTM+ VV ML  +S
Sbjct:  384 EFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDS-NRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIKGKKNNWSPEEDSSLFLLSYVWKSWREGEVLNIVDPSLVETIGVSDEIMKCIHIGLLCVQENAESRPTMASVVVMLNANS 622          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 2.622e-55
Identity = 111/241 (46.06%), Postives = 164/241 (68.05%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKT---HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK--NNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF NEI +++ LQH NLV++ G C+EG + +LVYE+++N SL + +F  +  QL L+W VR K+  G+ARGL +LHE+SR++I+HRD+KA+N+LLD+++NPKI+DFGLAKL + ++T     ++++AGT GYMAPEYA++G  + K DV+SFGV+ +EI++GK  NN     D      L W +   R   ++ ++DP L +  ++ E  R I I LLC   SP+ RPTM  V  ML   S
Sbjct:  401 EFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLKKRQL-LDWGVRYKMIGGVARGLLYLHEDSRYRIIHRDLKASNILLDQEMNPKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITGKGNNNGRSNDDEEAENLLSWVWRCWREDIILSVIDPSL-TTGSRSEILRCIHIGLLCVQESPASRPTMDSVALMLNSYS 639          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 5.842e-55
Identity = 110/237 (46.41%), Postives = 159/237 (67.09%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSN 713
            +F NE+ +IS +QH NLV++ GC +EG + LLVYEY+ N SL   LF  +N+   L+W  R  I +GI+ GL +LH  S  KI+HRDIK +N+LLDR+L+PKI+DFGL +    +KT  +T +AGT+GY+APEY + G LT KADVY+FGV+ +EIV+GK N ++   ++      W     ++ TL   +DPRL   F + EA ++++I LLC  +S  LRP+MSE+V ML+   +
Sbjct:  358 QFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFM-KNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVWEH--FKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSMSEIVFMLQNKDS 591          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.630e-55
Identity = 111/239 (46.44%), Postives = 159/239 (66.53%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRL-------GSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM 695
            EF+NE+ +I+ LQH NLV++ GCC+EGD+ +L+YEY+EN SL   LFG +  + KLNW  R  I  G+ARGL +LH++SRF+I+HRD+K +N+LLD+++ PKISDFG+A++ E ++T  +T +V GT GYM+PEYA++G  + K+DV+SFGV+ LEIVSGK N  +         L + +   + G  +E+VDP +        S F   E  + I+I LLC       RP MS VV M
Sbjct:  568 EFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFG-KTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNRGFYNLDYENDLLSYVWSRWKEGRALEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQELAEHRPAMSSVVWM 805          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.965e-55
Identity = 111/238 (46.64%), Postives = 159/238 (66.81%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF NE+ +++ LQH NLVK+ G C+E ++ +LVYE++ N SL + LF     Q +L+W  R KI  GIARG+ +LH++SR  I+HRD+KA N+LLD D+NPK++DFG+A++ E ++T   T RV GT GYM+PEYA++G  + K+DVYSFGV+ LEI+SG+ N S Y  D++    + + + L   G+ ++LVD      + + E  R I IALLC       RPTMS +V ML  SS
Sbjct:  380 EFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSR-MQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGRKNSSLYQMDASFGNLVTYTWRLWSDGSPLDLVDSSFRDSYQRNEIIRCIHIALLCVQEDTENRPTMSAIVQMLTTSS 616          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.301e-54
Identity = 109/238 (45.80%), Postives = 160/238 (67.23%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSG-KNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF NE+ +++ LQH NLV++ G C+EG++ +LVYE++ N SL + LF     + +L+W  R KI  GIARG+ +LH++SR  I+HRD+KA N+LLD D+NPK++DFG+A++   ++T  +T RV GT GYMAPEYA++G  + K+DVYSFGV+  EI+SG KN+  Y  D + +  + + + L  +G+ ++LVDP  G  +   +  R I IALLC       RP MS +V ML  SS
Sbjct:  548 EFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFD-TTMKRQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGQFSMKSDVYSFGVLVFEIISGMKNSSLYQMDDSVSNLVTYTWRLWSNGSQLDLVDPSFGDNYQTHDITRCIHIALLCVQEDVDDRPNMSAIVQMLTTSS 784          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 2.220e-54
Identity = 112/240 (46.67%), Postives = 160/240 (66.67%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCP--LDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            EF NE  +++ LQH NLV++ G C+E ++ +L+YE++ N SL + LF  E  Q +L+W  R KI  GIARG+ +LH++SR KI+HRD+KA+N+LLD D+NPKI+DFGLA +   E+T  +T R+AGT  YM+PEYA+ G  + K+D+YSFGV+ LEI+SGK N   Y  D   T    + +A  L R+ + +ELVDP  G  +   E  R I IALLC   +P  RP +S ++ ML  ++
Sbjct:  390 EFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEK-QSQLDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKKNSGVYQMDETSTAGNLVTYASRLWRNKSPLELVDPTFGRNYQSNEVTRCIHIALLCVQENPEDRPMLSTIILMLTSNT 628          
The following BLAST results are available for this feature:
BLAST of FC929077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK19_ARATH8.152e-5748.52Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK20_ARATH1.177e-5548.32Putative cysteine-rich receptor-like protein kinas... [more]
CRK29_ARATH1.537e-5547.72Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK41_ARATH2.622e-5545.83Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK28_ARATH2.622e-5546.06Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
CRK1_ARATH5.842e-5546.41Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
SRK6_BRAOE7.630e-5546.44Putative serine/threonine-protein kinase receptor ... [more]
CRK5_ARATH9.965e-5546.64Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK23_ARATH1.301e-5445.80Putative cysteine-rich receptor-like protein kinas... [more]
CRK11_ARATH2.220e-5446.67Cysteine-rich receptor-like protein kinase 11 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CB05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929077 ID=FC929077; Name=FC929077; organism=Citrus clementina; type=EST; length=723bp
GTGAATTCTTAAATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATG
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