FC929077

Overview
NameFC929077
Unique NameFC929077
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.308e-40
Identity = 88/233 (37.77%), Postives = 128/233 (54.94%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+  +S  QHPNLV + G C   +  LL+Y YM+N SL + L    +    L+W  R +I  G A GLA+LH+     I+HRDIK++N+LL       ++DFGLA+L     TH++T + GT+GY+ PEY      TYK DVYSFGVV LE+++G+  M           + W   +       E+ DP +  + +  E   +++IA  C   +P  RPT  ++VS LE
Sbjct:  783 EFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIFDPFIYDKDHAEEMLLVLEIACRCLGENPKTRPTTQQLVSWLE 1015          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.933e-40
Identity = 99/239 (41.42%), Postives = 144/239 (60.25%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGG-ENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIS-TRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNM---SYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSE-FNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF+ E+  I  ++H NLV + G C  G++ LLVYEYM+  SL   L    +   + L+W  R+KI +G ARGLAFLH      I+HRD+K++NVLLD+D   ++SDFG+A+L     TH+S + +AGT GY+ PEY      T K DVYS+GV+ LE++SGK  +    +  D+N    + WA  L+R     E++DP L ++    VE    +KIA  C +  P  RPTM +V++M +
Sbjct:  898 EFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNL---VGWAKQLYREKRGAEILDPELVTDKSGDVELLHYLKIASQCLDDRPFKRPTMIQVMTMFK 1133          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.055e-40
Identity = 93/237 (39.24%), Postives = 139/237 (58.65%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGEN-SQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL--DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKN-NMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+ M+S L+H +LV + G C + ++++LVYEYM + +L   LF  +  S   L+W  R +IC+G ARGL +LH  +++ I+HRDIK TN+LLD +   K+SDFGL+++      +TH+ST V GT GY+ PEY     LT K+DVYSFGVV LE++  +   M  VP       + W        T+ +++D  L ++      E+  +IA+ C       RP M++VV  LE
Sbjct:  566 EFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADL-IRWVKSNFNKRTVDQIIDSDLTADITSTSMEKFCEIAIRCVQDRGMERPPMNDVVWALE 801          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.183e-39
Identity = 88/235 (37.45%), Postives = 139/235 (59.15%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEE-SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  EI ++S ++H +LV + G C E  +++LVYE+ME  +L   L+G  ++   L W  R +IC+G ARGL +LH   S   I+HRD+K+TN+LLD     K++DFGL+K+  +++++IS  + GT GY+ PEY     LT K+DVY+FGVV LE++  +  +  Y+P        +W       GT+ E++DP L  +      ++ ++IA  C       RP+M +V+  LE
Sbjct:  528 EFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYG--SNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNISINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLS-EWVMFCKSKGTIDEILDPSLIGQIETNSLKKFMEIAEKCLKEYGDERPSMRDVIWDLE 759          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.545e-39
Identity = 89/234 (38.03%), Postives = 133/234 (56.84%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  EI M+S  +H +LV + G C E ++++LVYEYMEN +L   L+G  +  L L+W  R +IC+G ARGL +LH      ++HRD+K+ N+LLD +L  K++DFGL+K   E ++TH+ST V G+ GY+ PEY     LT K+DVYSFGVV  E++  +  +            +WA    + G L  ++DP L  +       +  +    C       RP+M +V+  LE
Sbjct:  522 EFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYG--SGLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAEWAMKWQKKGQLEHIIDPSLRGKIRPDSLRKFGETGEKCLADYGVDRPSMGDVLWNLE 753          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.017e-39
Identity = 95/237 (40.08%), Postives = 137/237 (57.81%), Query Frame = 3
Query:    6 FLNEIAMISCLQHPNLVKIHGCCVE--GDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWA-FHLHRSGTLMELVDPRLGSEFNKVEAERMI---KIALLCTNASPSLRPTMSEVVSML 698
            F  EI  +  ++H N+V+++  C     +  LL+YEYM   SL   L GG++  +  +WP R  I LG A GLA+LH + + +I+HRDIK+ N+L+D +    + DFGLAK+ +   +   + VAG+ GY+APEYA    +T K D+YSFGVV LE+++GK  +  +          W   H+       E++DP L    + V    MI   KIA+LCT +SPS RPTM EVV ML
Sbjct:  867 FRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHGGKSHSM--DWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGGDLA--TWTRNHIRDHSLTSEILDPYLTKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVVLML 1099          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.017e-39
Identity = 86/240 (35.83%), Postives = 134/240 (55.83%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPD 722
            +F+NEI ++S + H N+VK+ GCC+E +  +LVYEY+ N  +   L   E+    + W VR +I + IA  L ++H  + F I HRDIK TN+LLD     K+SDFG ++    ++TH++T VAGT GYM PEY L    T K+DVYSFGVV +E+++G+  +S +                +   +++++D R+  E    +   + K+A  C +     RP M E    LE   + P+
Sbjct:  472 KFINEIILLSQINHRNIVKLIGCCLETEVPILVYEYIPNGDMFKRLHD-ESDDYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEEGRGLATHFLEAMKENRVIDIIDIRIKEESKLDQLMAVAKLARKCLSRKGIKRPNMREASLELERIRSSPE 710          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.635e-39
Identity = 91/236 (38.56%), Postives = 139/236 (58.90%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGK---NNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            EF  E+ ++  + H +LV + G C +GD L L+YEYME   L   +  G++S   L+W  R +I +  A+GL +LH   R  +VHRD+K TN+LL+     K++DFGL++    + ++H+ T VAGT GY+ PEY    +L+ K+DVYSFGVV LEIV+ +   N     P  N     +W   +  +G +  +VDP+L  +++     +++++AL C N S S RPTM  VV  L
Sbjct:  609 EFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENM-SGKHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVMNKNRERPHIN-----EWVMFMLTNGDIKSIVDPKLNEDYDTNGVWKVVELALACVNPSSSRRPTMPHVVMEL 838          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.635e-39
Identity = 91/234 (38.89%), Postives = 136/234 (58.12%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  EI M+S L+H +LV + G C E  +++LVYEYM N  L   L+G +   L  +W  R +IC+G ARGL +LH  +   I+HRD+K TN+LLD +L  K++DFGL+K     ++TH+ST V G+ GY+ PEY     LT K+DVYSFGVV +E++  +  ++ V         +WA    + G L +++D  L  + N    ++  + A  C       RP+M +V+  LE
Sbjct:  550 EFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPL--SWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWAMAWQKKGLLDQIMDSNLTGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLE 781          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.635e-39
Identity = 90/234 (38.46%), Postives = 134/234 (57.26%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  EI ++S L+H +LV + G C EG ++ L+Y+YM   +L   L+  +  QL   W  R +I +G ARGL +LH  +++ I+HRD+K TN+LLD +   K+SDFGL+K        H++T V G+ GY+ PEY     LT K+DVYSFGVV  E++  +  ++           DWA +  R GTL +++DP L  + N    ++    A  C + S   RPTM +V+  LE
Sbjct:  561 EFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKRPQL--TWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLSKEQVSLGDWAMNCKRKGTLEDIIDPNLKGKINPECLKKFADTAEKCLSDSGLDRPTMGDVLWNLE 792          
The following BLAST results are available for this feature:
BLAST of FC929077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PSKR1_DAUCA5.308e-4037.77Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
BRL3_ARATH6.933e-4041.42Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y5389_ARATH9.055e-4039.24Probable receptor-like protein kinase At5g38990 OS... [more]
Y2232_ARATH1.183e-3937.45Probable receptor-like protein kinase At2g23200 OS... [more]
Y5597_ARATH1.545e-3938.03Probable receptor-like protein kinase At5g59700 OS... [more]
Y2317_ARATH2.017e-3940.08Probable leucine-rich repeat receptor-like protein... [more]
WAKLE_ARATH2.017e-3935.83Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
Y5189_ARATH2.635e-3938.56Probable LRR receptor-like protein kinase At1g5189... [more]
THE1_ARATH2.635e-3938.89Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
ANX2_ARATH2.635e-3938.46Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CB05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929077 ID=FC929077; Name=FC929077; organism=Citrus clementina; type=EST; length=723bp
GTGAATTCTTAAATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATG
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