FC929077

Overview
NameFC929077
Unique NameFC929077
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9285 contig Ccv1_Contig9285:2..724. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.808e-49
Identity = 102/238 (42.86%), Postives = 151/238 (63.45%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKT--HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRL--GSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 704
            EF NE  +++ LQH NLVK+ G  +EG + LLVYE++ + SL   +F       +L W +R KI  G+ARGL +LH++SR +I+HRD+KA+N+LLD ++ PKI+DFG+A+L + + T    + R+ GT GYMAPEY + G  ++K DVYSFGV+ LEI+SGK N  +  + +    + +A+   + G  + LVD  L   S ++     R I I LLC     + RP+M+ VV ML+G
Sbjct:  384 EFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQGN-ELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIISGKKNSGFSSEDSMGDLISFAWRNWKEGVALNLVDKILMTMSSYSSNMIMRCINIGLLCVQEKVAERPSMASVVLMLDG 620          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.668e-49
Identity = 108/241 (44.81%), Postives = 146/241 (60.58%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIS------TRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGS 707
            E  NEI +IS  QH NLV++ GCC       +VYE++ N SL H LF  E  + +L+W  R+ I LG A GL +LHE    KI+HRDIKA+N+LLD    PKISDFGLAK   E    I       + +AGT+GYMAPEY   G L+ K D YSFGV+ LEI SG  N  +  D++    +   +    S  + E++D  +G + +K E +R+++I LLCT  SP LRPTMS+V+ M+  +
Sbjct:  371 EIHNEIDVISRCQHKNLVRLLGCCFTNMNSFIVYEFLANTSLDHILFNPEKKK-ELDWKKRRTIILGTAEGLEYLHETC--KIIHRDIKASNILLDLKYKPKISDFGLAKFYPEGGKDIPASSLSPSSIAGTLGYMAPEYISKGRLSNKIDAYSFGVLVLEITSGFRNNKFRSDNSLETLVTQVWKCFASNKMEEMIDKDMGEDTDKQEMKRVMQIGLLCTQESPQLRPTMSKVIQMVSST 608          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.790e-49
Identity = 104/235 (44.26%), Postives = 145/235 (61.70%), Query Frame = 3
Query:    6 FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKN--NMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 704
            F  E+ MIS   H NL+++ G C    + LLVY +M+N SLAH L   +     L+W  R++I LG ARG  +LHE    KI+HRD+KA NVLLD D    + DFGLAKL +  +T+++T+V GT+G++APEY   G  + + DV+ +G++ LE+V+G+   + S + + +    LD    L R   L  +VD  L  E+ K E E MI++ALLCT  SP  RP MSEVV MLEG
Sbjct:  332 FQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCTQGSPEDRPVMSEVVRMLEG 566          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.790e-49
Identity = 104/241 (43.15%), Postives = 146/241 (60.58%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGG-ENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPD 722
            EF+ EI  +  L+H NLV + G C + + LLL+Y+Y+ N SL   L+     S + L+W  R KI  GIA GL +LHEE    ++HRDIK +NVL++ D+NP++ DFGLA+L E      +T V GTIGYMAPE A  G  +  +DV++FGV+ LEIVSG+       DS      DW   LH  G ++  VDPRLG  ++ VEA   + + LLC +  P+ RP+M  V+  L G  ++P+
Sbjct:  403 EFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRR----PTDSGTFFLADWVMELHARGEILHAVDPRLGFGYDGVEARLALVVGLLCCHQRPTSRPSMRTVLRYLNGDDDVPE 639          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.256e-49
Identity = 107/244 (43.85%), Postives = 158/244 (64.75%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHR--SGTLMELVDPRLGSEFNKV---EAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 716
            EF NE+ +++ LQH NLVK+ G C E D+ +LVYE++ N+SL H +F  E  ++ L W VR  I  G+ARGL +LHE+S+ +I+HRD+KA+N+LLD ++NPK++DFG+A+L D +E    ++RV GT GYMAPEYA +G  + K+DVYSFGV+ LE++SGK+N     +         AF   R   G   E++DP L +  N +   E  ++I I LLC     S RP+++ ++  LE  + I
Sbjct:  385 EFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDEEKRRV-LTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGKSNKKLEKEEEEEEEELPAFVWKRWIEGRFAEIIDP-LAAPSNNISINEVMKLIHIGLLCVQEDISKRPSINSILFWLERHATI 626          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.067e-48
Identity = 100/237 (42.19%), Postives = 145/237 (61.18%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSN 713
            EF  E+  I  ++H NLV++ G C+EG   +LVYEY+ + +L   L G       L W  R KI  G A+ LA+LHE    K+VHRDIKA+N+L+D + N K+SDFGLAKL +  ++HI+TRV GT GY+APEYA  G L  K+D+YSFGV+ LE ++G++ + Y   +N    ++W   +  +    E+VDPRL    +K   +R + ++L C +     RP MS+V  MLE   +
Sbjct:  223 EFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLESDEH 459          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.394e-48
Identity = 108/239 (45.19%), Postives = 152/239 (63.60%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTR-VAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 716
            EF NE+ +++ LQH NLVK+ G C EGD+ +LVYE++ N+SL H +F  E  +L L W +R +I  G+ARGL +LHE+S+ +I+HRD+KA+N+LLD  +NPK++DFG+A+L   ++T   TR V GT GYMAPEY      + K DVYSFGVV LE+++G++N +Y           +A+    +G    ++D  L S     E  R I I LLC   + S RPTMS V+  L GS  I
Sbjct:  379 EFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFD-EEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITGRSNKNYFEALGLPA---YAWKCWVAGEAASIIDHVL-SRSRSNEIMRFIHIGLLCVQENVSKRPTMSLVIQWL-GSETI 611          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.820e-48
Identity = 102/240 (42.50%), Postives = 155/240 (64.58%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTR-VAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCP---LDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 710
            +F NE  ++S +QH NL ++ G C++GD   L+YE++ N SL + LF  E  Q +L+W  R KI  GIA+G+  LH++ +  I++RD KA+N+LLD D+NPKISDFG+A +   E++  +T  +A T  YM+PEYA+ G  + K+DVYSFG++ LEI+SGK N S   +   T     + +A+ L R+G+ ++L+D  +G  +   E  R I IALLC   +P  RP +S +VSML  ++
Sbjct:  393 KFRNEAVLVSKIQHRNLARLLGFCLQGDGKFLIYEFVLNKSLDYFLFDPEK-QGELDWTRRYKIIGGIAQGILHLHQDPQLTIIYRDFKASNILLDADMNPKISDFGMATVFGMEESRGNTNWIAETFVYMSPEYAVHGKFSMKSDVYSFGILILEIISGKKNSSLYQNDETTTAGNLVTYAWRLWRNGSQLKLLDSSIGRNYQSNEVTRCIHIALLCVQENPEDRPKLSTIVSMLTSNT 631          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 2.377e-48
Identity = 100/236 (42.37%), Postives = 146/236 (61.86%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKN--NMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 704
            +F  E+ MIS   H NL+++ G C+   + LLVY YM N S+A  L         L+WP R+ I LG ARGLA+LH+    KI+HRD+KA N+LLD +    + DFGLAKL     +H++T V GTIG++APEY   G  + K DV+ +GV+ LE+++G+   +++ + + +    LDW   + +   L  LVD  L  ++ + E E++I++ALLCT +S   RP MSEVV MLEG
Sbjct:  335 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLEG 570          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.105e-48
Identity = 103/239 (43.10%), Postives = 151/239 (63.18%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 716
            EF NE+ +++ LQH NLV++ G  V+G++ ++VYEY+ N SL + LF     Q +L+W  R KI  G ARG+ +LH++S+  I+HRD+KA N+LLD  +NPK++DFG A++   ++   I+   AGT GYMAPEY   G  + K+DVYS+GV+ LEI+ GK N S+   S     + + + L +SGT + LVD  +   +   E  R I IALLC    P+ RP  S ++SML  +S I
Sbjct:  398 EFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFD-PTKQGELDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIFGMDQSVAITANAAGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKRNTSF--SSPVQNFVTYVWRLWKSGTPLNLVDATIAENYKSEEVIRCIHIALLCVQEEPTDRPDFSIIMSMLTSNSLI 633          
The following BLAST results are available for this feature:
BLAST of FC929077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK26_ARATH2.808e-4942.86Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK43_ARATH3.668e-4944.81Putative cysteine-rich receptor-like protein kinas... [more]
Y5129_ARATH4.790e-4944.26Probable LRR receptor-like serine/threonine-protei... [more]
LRKA2_ARATH4.790e-4943.15Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK37_ARATH6.256e-4943.85Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
Y2296_ARATH1.067e-4842.19Probable receptor-like protein kinase At2g42960 OS... [more]
CRK38_ARATH1.394e-4845.19Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK22_ARATH1.820e-4842.50Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
SERK4_ARATH2.377e-4842.37Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
CRK13_ARATH3.105e-4843.10Cysteine-rich receptor-like protein kinase 13 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CB05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929077 ID=FC929077; Name=FC929077; organism=Citrus clementina; type=EST; length=723bp
GTGAATTCTTAAATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATG
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