FC929077

Overview
NameFC929077
Unique NameFC929077
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.105e-48
Identity = 106/235 (45.11%), Postives = 142/235 (60.43%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            E+L E+  +  L HPNLV + G C EG+  LLVYE+M   SL + LF        L W +R K+ +G A+GL FLHE ++ ++++RD KA N+LLD D N K+SDFGLAK     + TH+ST+V GT GY APEY   G LT K+DVYSFGVV LE++SG+  M      N    +DWA  +L     L  ++D +LG ++ +  A     +AL C N    LRP MSEV+  LE
Sbjct:  136 EWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLF--RRGAQPLTWAIRMKVAVGAAKGLTFLHE-AKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAKLRPKMSEVLVTLE 367          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.055e-48
Identity = 105/235 (44.68%), Postives = 145/235 (61.70%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            E+L E+  +  L HPNLVK+ G CVEG+  LLVYE+M   SL + LF        L W +R K+ +G A+GL FLH+ ++ ++++RD KA N+LLD + N K+SDFGLAK     +KTH+ST+V GT GY APEY   G LT K+DVYSFGVV LE++SG+  +           +DWA  +L     L  ++D RLG ++ +  A     +AL C N    LRP MSEV++ L+
Sbjct:  133 EWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLF--RRGAQPLTWAIRMKVAIGAAKGLTFLHD-AKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAKLD 364          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.034e-48
Identity = 106/235 (45.11%), Postives = 149/235 (63.40%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLK-LNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            E+L EI  +  L HPNLVK+ G C+E +Q LLVYE+M   SL + LF   N   K L+W +R K+ L  A+GLAFLH +   K+++RDIKA+N+LLD D N K+SDFGLA+     E++++STRV GT GY APEY   G+L  ++DVYSFGVV LE++ G+  + +   +     +DWA  +L     ++ +VD RL S++    A R+  IA+ C +  P  RPTM +VV  L
Sbjct:  111 EWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDP-VKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRAL 344          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.034e-48
Identity = 99/234 (42.31%), Postives = 142/234 (60.68%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRS-GTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            EF+ E+  +S   HPNLVK+ G C EGDQ LLVYEYM   SL   L    + +  L+W  R KI  G ARGL +LH+     +++RD+K +N+LL  D  PK+SDFGLAK+    +KTH+STRV GT GY AP+YA+ G LT+K+D+YSFGVV LE+++G+  +           + WA  L +      ++VDP L  ++      + + I+ +C    P++RP +S+VV  L
Sbjct:  144 EFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLAL 377          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.541e-47
Identity = 99/236 (41.95%), Postives = 145/236 (61.44%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKN--NMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 704
            +F  E+ MIS   H NL+++ G C+   + LLVY YM N S+A  L         L+WP R+ I LG ARGLA+LH+    KI+H D+KA N+LLD +    + DFGLAKL     +H++T V GTIG++APEY   G  + K DV+ +GV+ LE+++G+   +++ + + +    LDW   + +   L  LVD  L  ++ + E E++I++ALLCT +S   RP MSEVV MLEG
Sbjct:  316 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLEG 551          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.483e-47
Identity = 101/241 (41.91%), Postives = 142/241 (58.92%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGG-ENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPD 722
            EF+ EI  +  L+H NLV + G C   + LLL+Y+Y+ N SL   L+     S   L+W  R +I  GIA GL +LHEE    ++HRD+K +NVL+D D+NP++ DFGLA+L E      +T V GTIGYMAPE A  G  +  +DV++FGV+ LEIVSG+       DS      DW   L  SG ++  +DPRLGS +++ EA   + + LLC +  P  RP M  V+  L    ++P+
Sbjct:  404 EFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRK----PTDSGTFFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLCCHHKPESRPLMRMVLRYLNRDEDVPE 640          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.856e-47
Identity = 102/239 (42.68%), Postives = 145/239 (60.67%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRS-GTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSN 713
            EFL E+ M+S L HPNLV + G C +GDQ LLVYE+M   SL   L      +  L+W +R KI  G A+GL FLH+++   +++RD K++N+LLD   +PK+SDFGLAKL    +K+H+STRV GT GY APEYA+ G LT K+DVYSFGVV LE+++G+  +           + WA  L       ++L DPRL   F      + + +A +C     + RP +++VV+ L   +N
Sbjct:  127 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTALSYLAN 365          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.648e-47
Identity = 99/241 (41.08%), Postives = 144/241 (59.75%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFG-GENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPD 722
            EF+ EI  +  L+H NLV + G C   + LLL+Y+Y+ N SL   L+     S   L+W  R +I  GIA GL +LHEE    ++HRD+K +NVL+D  +NP++ DFGLA+L E      +T + GTIGYMAPE +  G  +  +DV++FGV+ LEIV G+       DS     +DW   LH +G ++  +DPRLGS ++  EA   + + LLC +  P+ RP+M  V+  L G  N+P+
Sbjct:  407 EFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRK----PTDSGTFFLVDWVMELHANGEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSMRIVLRYLNGEENVPE 643          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 185.652 bits (470), Expect = 2.225e-46
Identity = 95/233 (40.77%), Postives = 135/233 (57.94%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF  E+  +S  QHPNLV + G C   +  LL+Y YMEN SL + L    +    L W  R +I  G A+GL +LHE     I+HRDIK++N+LLD + N  ++DFGLA+L    +TH+ST + GT+GY+ PEY      TYK DVYSFGVV LE+++ K  +       C   + W   +       E+ DP + S+ N  E  R+++IA LC + +P  RPT  ++VS L+
Sbjct:  774 EFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRDLISWVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIACLCLSENPKQRPTTQQLVSWLD 1006          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.442e-45
Identity = 103/236 (43.64%), Postives = 141/236 (59.75%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPD---SNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF+ E+  +  ++HPNLV + G C   ++ LLVYEYM N SL H L         L+W  R KI +G ARGLAFLH      I+HRDIKA+N+LLD D  PK++DFGLA+L    ++H+ST +AGT GY+ PEY      T K DVYSFGV+ LE+V+GK      PD   S     + WA      G  ++++DP L S   K    R+++IA+LC   +P+ RP M +V+  L+
Sbjct:  957 EFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTG--PDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALK 1190          
The following BLAST results are available for this feature:
BLAST of FC929077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APK2A_ARATH3.105e-4845.11Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
APK2B_ARATH4.055e-4844.68Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y3545_ARATH9.034e-4845.11Probable receptor-like protein kinase At3g55450 OS... [more]
RLCK7_ARATH9.034e-4842.31Probable serine/threonine-protein kinase RLCKVII O... [more]
SERK5_ARATH1.541e-4741.95Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
LRKA3_ARATH4.483e-4741.91Lectin-domain containing receptor kinase A4.3 OS=A... [more]
PBS1_ARATH5.856e-4742.68Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
LRKA1_ARATH7.648e-4741.08Lectin-domain containing receptor kinase A4.1 OS=A... [more]
PSKR1_ARATH2.225e-4640.77Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
EXS_ARATH1.442e-4543.64Leucine-rich repeat receptor protein kinase EXS OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CB05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929077 ID=FC929077; Name=FC929077; organism=Citrus clementina; type=EST; length=723bp
GTGAATTCTTAAATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATG
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