FC929077

Overview
NameFC929077
Unique NameFC929077
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.213e-45
Identity = 95/235 (40.43%), Postives = 138/235 (58.72%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDS-NCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 704
            +F  E+ MI    H NL+++ G C+  ++ +LVY YM N S+A  L      +  L+W  R  I LG ARGL +LHE+   KI+HRD+KA N+LLD      + DFGLAKL ++  +H++T V GTIG++APEY   G  + K DV+ FGV+ LE+++G   +            L W   L       E+VD  L  EF+ +  E ++++ALLCT   P+LRP MS+V+ +LEG
Sbjct:  340 QFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLEG 574          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.196e-45
Identity = 103/235 (43.83%), Postives = 147/235 (62.55%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            E+L EI  +  L HPNLVK+ G C+E +  LLVYE+M+  SL + LF        L W +R  + L  A+GLAFLH +   K+++RDIKA+N+LLD D N K+SDFGLA+     + +++STRV GT GY APEY   G+L  ++DVYSFGV+ LEI+SGK  + +   +     +DWA  +L     ++ +VD RL +++   EA RM  +A+ C +  P  RPTM +VV  L+
Sbjct:  117 EWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDP-VKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRALQ 350          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 7.158e-45
Identity = 101/235 (42.98%), Postives = 147/235 (62.55%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            E+L EI  +  L HPNLVK+ G C+E +  LLVYE+M   SL + LF        L+W  R ++ LG ARGLAFLH  ++ ++++RD KA+N+LLD + N K+SDFGLA+     + +H+STRV GT GY APEY   G+L+ K+DVYSFGVV LE++SG+  +           +DWA  +L     L+ ++DPRL  +++   A ++  +AL C +     RPTM+E+V  +E
Sbjct:  118 EWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLH-NAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTME 351          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 7.158e-45
Identity = 101/235 (42.98%), Postives = 144/235 (61.28%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFH-LHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            E+L E+  +    HPNLVK+ G C+E +  LLVYE+M   SL + LF   +    L+W +R K+ LG A+GLAFLH  +   +++RD K +N+LLD + N K+SDFGLAK     +K+H+STR+ GT GY APEY   G+LT K+DVYS+GVV LE++SG+  +           ++WA   L     L  ++D RL  +++  EA ++  +AL C      LRP M+EVVS LE
Sbjct:  119 EWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLH-NAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLE 352          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.720e-44
Identity = 96/232 (41.38%), Postives = 131/232 (56.47%), Query Frame = 3
Query:    6 FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 698
            FL  ++ +S L+HPN+V + G C E  Q LLVYEY+ N +L   L   ++  + L W  R K+ LG A+ L +LHE     IVHR+ K+ N+LLD +LNP +SD GLA L    +  +ST+V G+ GY APE+AL G  T K+DVY+FGVV LE+++G+  +           + WA   LH    L ++VDP L   +      R   I  LC    P  RP MSEVV  L
Sbjct:  438 FLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRPPMSEVVQQL 669          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.720e-44
Identity = 102/235 (43.40%), Postives = 145/235 (61.70%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF-HLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            E+L E+  +    H +LVK+ G C+E +  LLVYE+M   SL + LF        L+W +R K+ LG A+GLAFLH  S  ++++RD K +N+LLD + N K+SDFGLAK     +K+H+STRV GT GY APEY   G+LT K+DVYSFGVV LE++SG+  +     S     ++WA  +L     +  ++D RL  +++  EA ++  ++L C      LRP MSEVVS LE
Sbjct:  118 EWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHS-SETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLE 351          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.060e-44
Identity = 93/233 (39.91%), Postives = 145/233 (62.23%), Query Frame = 3
Query:    6 FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            F+NE+ ++S ++H NLV   G C E  + +LVYEY+   SLA  L+G  + +  LNW  R K+ +  A+GL +LH  S  +I+HRD+K++N+LLD+D+N K+SDFGL+K   + + +HI+T V GT GY+ PEY     LT K+DVYSFGVV LE++ G+  +S+    +    + WA    ++G   E+VD  L   F+    ++   IA+ C     S RP+++EV++ L+
Sbjct:  647 FINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLVLWARPNLQAGA-FEIVDDILKETFDPASMKKAASIAIRCVGRDASGRPSIAEVLTKLK 878          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 3.928e-43
Identity = 93/234 (39.74%), Postives = 142/234 (60.68%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 701
            EF NE+ ++S +QH NLV + G C E DQ +LVY +M N SL   L+G  + +  L+WP R  I LG ARGLA+LH      ++HRD+K++N+LLD+ +  K++DFG +K   +E  +++S  V GT GY+ PEY     L+ K+DV+SFGVV LEIVSG+  ++          ++WA    R+  + E+VDP +   ++     R++++AL C     + RP M ++V  LE
Sbjct:  636 EFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELE 869          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 8.750e-43
Identity = 95/239 (39.75%), Postives = 138/239 (57.74%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIP 719
            EF+NEI ++S + H N+VK+ GCC+E +  +LVYEY+ N  L   L   E     + W VR +I + IA  L+++H  + F I HRDIK TN+LLD     KISDFG ++    ++TH++T VAGT GYM PEY L    T+K+DVYSFGVV +E+++G+  MS V          +     +    ++++D R+  E  +V A  + K+A  C N   + RP M EV   LE   + P
Sbjct:  468 EFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHD-EYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSRVRSEEGIGLATYFLEAMKENRAVDIIDIRIKDESKQVMA--VAKLARRCLNRKGNKRPNMREVSIKLERIRSSP 703          
BLAST of FC929077 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.143e-42
Identity = 94/241 (39.00%), Postives = 142/241 (58.92%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS---YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 716
            +F+ E+A++S + H NLV + G C E D+ +LVYEYM N SL   L G  + +  L+W  R +I    A+GL +LH      I+HRD+K++N+LLD ++  K+SDFGL++  EE+ TH+S+   GT+GY+ PEY     LT K+DVYSFGVV  E++SGK  +S   + P+ N    + WA  L R G +  ++DP + S        R+ ++A  C       RP M EV+  ++ +  I
Sbjct:  646 QFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYK-PLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNI---VHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAIQDAIRI 882          
The following BLAST results are available for this feature:
BLAST of FC929077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5457_ARATH3.213e-4540.43Probable LRR receptor-like serine/threonine-protei... [more]
BIK1_ARATH4.196e-4543.83Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
NAK_ARATH7.158e-4542.98Probable serine/threonine-protein kinase NAK OS=Ar... [more]
APK1B_ARATH7.158e-4542.98Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
SRF8_ARATH2.720e-4441.38Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
APK1A_ARATH2.720e-4443.40Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y5487_ARATH6.060e-4439.91Probable LRR receptor-like serine/threonine-protei... [more]
NORK_MEDTR3.928e-4339.74Nodulation receptor kinase OS=Medicago truncatula ... [more]
WAKLC_ARATH8.750e-4339.75Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
Y1677_ARATH1.143e-4239.00Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CB05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929077 ID=FC929077; Name=FC929077; organism=Citrus clementina; type=EST; length=723bp
GTGAATTCTTAAATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATG
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