FC929081

Overview
NameFC929081
Unique NameFC929081
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length854
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: M313A_XENLA (Mitogen-activated protein kinase kinase kinase 13-A OS=Xenopus laevis GN=map3k13-A PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.862e-18
Identity = 63/212 (29.72%), Postives = 109/212 (51.42%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLR--NRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLV 701
            +G G  G V+      G+ VA+KK+ + K         +++ L K+KH N++   G C+      L+ EY  +G L   LR   +     ++ W        G A G+ +LH      IIHRD+K+ N+L+      K++DFG ++ +S   T +S   AGT  ++ PE  ++   + + D++SFGV+L EL+TG+ P    +KD++   ++
Sbjct:  175 LGSGAQGAVFLGKFR-GEEVAIKKVREQKE-------TDIKHLRKLKHPNIIAFKGVCTQAPCYCLIMEYCAHGQLYEVLRAGRKVSPRLLVDWSN------GIASGMNYLH---LHKIIHRDLKSPNVLVTHTDTVKISDFGTSKELSDKSTKMS--FAGTVAWMAPEVIRNEPVSEKVDIWSFGVLLWELLTGEIP----YKDVDSSAII 363          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: IPL1_YEAST (Spindle assembly checkpoint kinase OS=Saccharomyces cerevisiae GN=IPL1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.862e-18
Identity = 75/248 (30.24%), Postives = 116/248 (46.77%), Query Frame = 3
Query:   72 IGDGGFGTVYKAA-LPDGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLR 803
            +G G FG VY       G   A+K + +    K    ++F  E+E    + H NL    GY    +   L+ EY+VNG +   LR      ++L  D  Y+I    A  L ++H     +IIHRDIK  NIL+      K+ DFG + +I+  E    T + GT  Y+ PE  +S       D ++ GV+  EL+TG  P   E KD              K+  A D+  P+ ++ D++ ++LK+L+
Sbjct:  110 LGKGKFGKVYCVRHRSTGYICALKVMEKEEIIKYNLQKQFRREVEIQTSLNHPNLTKSYGYFHDEKRVYLLMEYLVNGEMYKLLRLHGPFNDILASDYIYQI----ANALDYMH---KKNIIHRDIKPENILIGFNNVIKLTDFGWS-IINPPENRRKT-VCGTIDYLSPEMVESREYDHTIDAWALGVLAFELLTGAPPFEEEMKD-----------TTYKRIAALDIKMPSNISQDAQDLILKLLK 337          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: FRK_RAT (Tyrosine-protein kinase FRK OS=Rattus norvegicus GN=Frk PE=1 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 9.862e-18
Identity = 71/263 (27.00%), Postives = 125/263 (47.53%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV---STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT 848
            +G G FG V++    +   VAVK L       + +F  E + +  ++H  L+ L   C+  +   ++ E M +GSL  +L+N  GS   L   ++  +A   A G+A+L    + + IHRD+ A N+L+ E    KVADFGLAR+       +     +I     +  PE  ++ + + + DV+SFG++L E++T GK P    +  + G  ++  + Q  +  Q ++  +             +   I  +C +  P  RPT
Sbjct:  241 LGSGQFGEVWEGLWNNTTPVAVKTLKPGSMDPN-DFLREAQIMKSLRHPKLIQLYAVCTLEDPIYIITELMRHGSLQEYLQNDGGSKIRL--TQQVDMAAQVASGMAYLE---SQNYIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDIYESKHEIKLPVKWTAPEAIRTNKFSIKSDVWSFGILLYEIITYGKMP----YSGMTGAQVIHMLGQNYRLPQPSNCPE-------------QFYSIMMECWNVEPKQRPT 480          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: EPHB2_MOUSE (Ephrin type-B receptor 2 OS=Mus musculus GN=Ephb2 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 9.862e-18
Identity = 68/208 (32.69%), Postives = 108/208 (51.92%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +IG G FG V    L   GK    VA+K L    T+  R +F +E   +G+  H N++ L G  +     +++ E+M NGSLD +LR   G   V+   +   +  G A G+ +L      + +HRD+ A NIL+N     KV+DFGL+R +   +T   T  +   G IP     PE  Q  + T+  DV+S+G+++ E+++ G+ P
Sbjct:  634 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED-DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 834          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: EPHB2_HUMAN (Ephrin type-B receptor 2 OS=Homo sapiens GN=EPHB2 PE=1 SV=5)

HSP 1 Score: 90.8929 bits (224), Expect = 9.862e-18
Identity = 68/208 (32.69%), Postives = 108/208 (51.92%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +IG G FG V    L   GK    VA+K L    T+  R +F +E   +G+  H N++ L G  +     +++ E+M NGSLD +LR   G   V+   +   +  G A G+ +L      + +HRD+ A NIL+N     KV+DFGL+R +   +T   T  +   G IP     PE  Q  + T+  DV+S+G+++ E+++ G+ P
Sbjct:  626 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED-DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 826          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: SPKA_SYNY3 (Serine/threonine-protein kinase A OS=Synechocystis sp. (strain PCC 6803) GN=spkA PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.288e-17
Identity = 83/283 (29.33%), Postives = 128/283 (45.23%), Query Frame = 3
Query:   48 NNFCKTNIIGDGGFGTVYKAA--LPDGKTVAVKKLSQAKTQGHREFTAEME-TLGKVKHQNLVPLLGYCSFG----EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH-----IIHRDIKASNILLNEEFE----AKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK-PMMLKMLRIAGDCLSDNPAMRP 845
            N +    ++G G  G VY+A   L  G TVAVK LSQA      +   E E T+  +  +  + ++    +G    E    V EY+   ++   ++ R   +E     +  KIA     GL   H G         ++HRDIK SN+LL E+       K+ DFG+A+L+ A E   +    GT  Y  PE  +     +R D+YS GV++ E++TG+ P  P     +  +  GW        +A     P   +A  K P  L+ L +  +CL+ +P  RP
Sbjct:   13 NRYQLVELVGSGAMGQVYRAEDKLLGGVTVAVKFLSQALLNPRMKERFEREATISALLGEKSIHIVRVRDYGLDEKEIPFYVMEYLQGENISDVIKYRPLKVE-----RFLKIARQICFGLDCAHKGIIYQGEACPVVHRDIKPSNVLLVEDPALGELVKILDFGIAKLVQAAEESKTQAFMGTLAYCSPEQMEGKELDSRSDIYSLGVMMYEMLTGEMPLFP-----DNSSFGGWY-------EAHHHTKPHPFSARYKIPASLEALVM--NCLAKSPKGRP 276          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: MET_NEONE (Hepatocyte growth factor receptor OS=Neofelis nebulosa GN=MET PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.288e-17
Identity = 72/213 (33.80%), Postives = 108/213 (50.70%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDGKT----VAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 671
            +IG G FG VY   L D        AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1084 VIGRGHFGCVYHGTLLDSDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1287          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: MET_MUSPF (Hepatocyte growth factor receptor OS=Mustela putorius furo GN=MET PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.288e-17
Identity = 72/213 (33.80%), Postives = 108/213 (50.70%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDGKT----VAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 671
            +IG G FG VY   L D        AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1084 VIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1287          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: MET_HORSE (Hepatocyte growth factor receptor OS=Equus caballus GN=MET PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.288e-17
Identity = 72/213 (33.80%), Postives = 108/213 (50.70%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDGKT----VAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 671
            +IG G FG VY   L D        AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1286          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: MET_FELCA (Hepatocyte growth factor receptor OS=Felis catus GN=MET PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.288e-17
Identity = 72/213 (33.80%), Postives = 108/213 (50.70%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDGKT----VAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 671
            +IG G FG VY   L D        AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1084 VIGRGHFGCVYHGTLLDSDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1287          
The following BLAST results are available for this feature:
BLAST of FC929081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
M313A_XENLA9.862e-1829.72Mitogen-activated protein kinase kinase kinase 13-... [more]
IPL1_YEAST9.862e-1830.24Spindle assembly checkpoint kinase OS=Saccharomyce... [more]
FRK_RAT9.862e-1827.00Tyrosine-protein kinase FRK OS=Rattus norvegicus G... [more]
EPHB2_MOUSE9.862e-1832.69Ephrin type-B receptor 2 OS=Mus musculus GN=Ephb2 ... [more]
EPHB2_HUMAN9.862e-1832.69Ephrin type-B receptor 2 OS=Homo sapiens GN=EPHB2 ... [more]
SPKA_SYNY31.288e-1729.33Serine/threonine-protein kinase A OS=Synechocystis... [more]
MET_NEONE1.288e-1733.80Hepatocyte growth factor receptor OS=Neofelis nebu... [more]
MET_MUSPF1.288e-1733.80Hepatocyte growth factor receptor OS=Mustela putor... [more]
MET_HORSE1.288e-1733.80Hepatocyte growth factor receptor OS=Equus caballu... [more]
MET_FELCA1.288e-1733.80Hepatocyte growth factor receptor OS=Felis catus G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CB10RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CB10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929081 ID=FC929081; Name=FC929081; organism=Citrus clementina; type=EST; length=854bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAGAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CGGTTGGGTGTTTCAGAAGATGAAGAAGGGACAGGCTGCTGATGTTCTAG
ATCCTACAGTCCTTACTGCAGATTCAAAGCCCATGATGCTTAAAATGCTC
CGGATTGCTGGTGATTGCCTCTCTGATAACCCTGCTATGAGGCCTACCAT
GCTG
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