FC929081

Overview
NameFC929081
Unique NameFC929081
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length854
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: EPHA5_CHICK (Ephrin type-A receptor 5 OS=Gallus gallus GN=EPHA5 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.747e-17
Identity = 66/206 (32.04%), Postives = 105/206 (50.97%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG--TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +IG G FG V    L   GK    VA+K L    T+  R +F  E   +G+  H N++ L G  +  +  ++V EYM NGSLD +L+   G   V+   +   +  G A G+ +L   G+    +HRD+ A NIL+N     KV+DFGL+R++        T   G     +  PE     + T+  DV+S+G+++ E+++ G+ P
Sbjct:  656 VIGAGEFGEVCSGRLKLQGKREFPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVMSYGERP 854          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: Y0146_DICDI (Probable serine/threonine-protein kinase DDB_G0270146 OS=Dictyostelium discoideum GN=DDB_G0270146 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.894e-17
Identity = 66/199 (33.17%), Postives = 99/199 (49.75%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 659
            IG G F TV+K      G  VA+K+  ++K   + H   + E + L ++ H+N+V +LG         +  EYM NGSL   L N     E L  +    +     +GL +LH      +IHRDIKA+NIL+N+  EAK++DFG A  I   E+     + GT  ++ PE  +        D++S G  ++EL T   P
Sbjct:   83 IGKGAFATVFKGLNTLSGDFVAIKRFEKSKISNEQHSSVSTEFDILQRLNHENIVRILGREENENYIYIFLEYMENGSLSTILNNFGTFPESLICNYVENVL----KGLVYLHQ---EGVIHRDIKAANILINKAGEAKLSDFGTAGEIIK-ESDKRYSVVGTPYWMAPEVIEISGHCQVSDIWSLGCTIIELFTSYPP 273          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.894e-17
Identity = 80/271 (29.52%), Postives = 130/271 (47.97%), Query Frame = 3
Query:   60 KTNIIGDGGFGTVYKAALPDGKTVAVKKLS--QAKTQGHREFTAEME----TLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT 848
            K  ++G G  G+VY+    DG   A K++S     +Q H E+  ++E     L +++HQN+V   G         +  E +  GSL  L+ RN+ G   V  + ++         GL +LH  GF    IHR+IK +N+L++     K+ADFGLA+++S   T     +A      P +Y   G   T  D++S G  +LE++TG+ P    + D+E    +G     +  G+   +  P +L+ D++  +L        CL  NP  RPT
Sbjct: 1628 KGQLLGRGSLGSVYEGISADGDFFAFKEVSLLDQGSQAH-EWIQQVEGGIALLSQLQHQNIVRYRGTTKDESNLYIFLELVTQGSLRKLYQRNQLGDSVVSLYTRQI------LDGLKYLHDKGF----IHRNIKCANVLVDANGTVKLADFGLAKVMSLWRTPYWNWMAPEVILNPKDYDGYG---TPADIWSLGCTVLEMLTGQIP----YSDLE----IGTALYNIGTGKLPKI--PDILSLDARDFIL-------TCLKVNPEERPT 1867          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: TIE2_HUMAN (Angiopoietin-1 receptor OS=Homo sapiens GN=TEK PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.894e-17
Identity = 72/216 (33.33%), Postives = 105/216 (48.61%), Query Frame = 3
Query:   66 NIIGDGGFGTVYKAALP-DGKTV--AVKKLSQ-AKTQGHREFTAEMETLGKVKHQ-NLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNR------------TGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP-----EYGQSGRSTTRGDVYSFGVILLELVT 647
            ++IG+G FG V KA +  DG  +  A+K++ + A    HR+F  E+E L K+ H  N++ LLG C       L  EY  +G+L  +LR                +   L   +    A   ARG+ +L        IHRD+ A NIL+ E + AK+ADFGL+R     E +V      T G +P      E       TT  DV+S+GV+L E+V+
Sbjct:  828 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK----TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 1033          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: TIE2_BOVIN (Angiopoietin-1 receptor OS=Bos taurus GN=TEK PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.894e-17
Identity = 72/216 (33.33%), Postives = 105/216 (48.61%), Query Frame = 3
Query:   66 NIIGDGGFGTVYKAALP-DGKTV--AVKKLSQ-AKTQGHREFTAEMETLGKVKHQ-NLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNR------------TGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP-----EYGQSGRSTTRGDVYSFGVILLELVT 647
            ++IG+G FG V KA +  DG  +  A+K++ + A    HR+F  E+E L K+ H  N++ LLG C       L  EY  +G+L  +LR                +   L   +    A   ARG+ +L        IHRD+ A NIL+ E + AK+ADFGL+R     E +V      T G +P      E       TT  DV+S+GV+L E+V+
Sbjct:  829 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK----TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 1034          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: SRMS_HUMAN (Tyrosine-protein kinase Srms OS=Homo sapiens GN=SRMS PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.894e-17
Identity = 60/192 (31.25%), Postives = 95/192 (49.48%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT 647
            +G+G FG V++        VA+K +  A  +   +   E++TL  ++H+ L+ L   CS GE   +V E M  G+L  +L    G    L        AC  A G+++L       ++HRD+ A N+L+++    KVADFGLARL+       S+       +  PE       + + DV+SFGV+L E+ T
Sbjct:  236 LGEGYFGEVWEGLWLGSLPVAIKVIKSANMK-LTDLAKEIQTLKGLRHERLIRLHAVCSGGEPVYIVTELMRKGNLQAFLGTPEG--RALRLPPLLGFACQVAEGMSYLEE---QRVVHRDLAARNVLVDDGLACKVADFGLARLLKDDIYSPSSSSKIPVKWTAPEAANYRVFSQKSDVWSFGVLLHEVFT 421          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: IGF1R_BOVIN (Insulin-like growth factor 1 receptor (Fragment) OS=Bos taurus GN=IGF1R PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.894e-17
Identity = 81/280 (28.93%), Postives = 133/280 (47.50%), Query Frame = 3
Query:   72 IGDGGFGTVYKAAL-------PDGKTVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLE---VLG---WDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTML 854
            +G G FG VY+          P+ + VA+K +++A +   R EF  E   + +    ++V LLG  S G+  L++ E M  G L  +LR+    +E   VL      K  ++A   A G+A+L+       +HRD+ A N ++ E+F  K+ DFG+ R I   + +      G  G +P     PE  + G  TT  DV+SFGV+L E+ T  E     ++ +    ++ +V +    G   D  D      +   M+ +++R+   C   NP MRP+ L
Sbjct:  278 LGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFTTHSDVWSFGVVLWEIATLAE---QPYQGLSNEQVLRFVME----GGLLDKPD------NCPDMLFELMRM---CWQYNPKMRPSFL 533          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: EPHA5_HUMAN (Ephrin type-A receptor 5 OS=Homo sapiens GN=EPHA5 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 4.894e-17
Identity = 66/206 (32.04%), Postives = 105/206 (50.97%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG--TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +IG G FG V    L   GK    VA+K L    T+  R +F  E   +G+  H N++ L G  +  +  ++V EYM NGSLD +L+   G   V+   +   +  G + G+ +L   G+    +HRD+ A NIL+N     KV+DFGL+R++        T   G     +  PE     + T+  DV+S+G+++ E+V+ G+ P
Sbjct:  680 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI---QLVGMLRGISAGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 878          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: EPHA3_CHICK (Ephrin type-A receptor 3 OS=Gallus gallus GN=EPHA3 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.894e-17
Identity = 66/213 (30.99%), Postives = 107/213 (50.23%), Query Frame = 3
Query:   48 NNFCKTNIIGDGGFGTVY--KAALPDGK--TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG--TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEP 659
            +N     ++G G FG V   +  LP  K  +VA+K L    T+  R +F  E   +G+  H N++ L G  +  +  ++V EYM NGSLD +LR       V+   +   +  G A G+ +L   G+    +HRD+ A NIL+N     KV+DFGL+R++        T   G     +  PE     + T+  D +S+G++L E+++ G+ P
Sbjct:  619 SNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKAGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDAWSYGIVLWEVMSYGERP 824          
BLAST of FC929081 vs. ExPASy Swiss-Prot
Match: DST2_DICDI (Serine/threonine-protein kinase dst2 OS=Dictyostelium discoideum GN=dst2 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.894e-17
Identity = 60/202 (29.70%), Postives = 101/202 (50.00%), Query Frame = 3
Query:   72 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA-RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRS----TTRGDVYSFGVILLELVTGKEP 659
            I +G FGTVYK   LP G  +AVK ++  + +   +   E++ L +  H N+V   G    G+E  +  E    GS+    +     L     + +    C    +GL +LHH    ++IHRD+K +NILL E  + K+ADFG++ L+   ++       GT  ++ PE  ++  +     T+ D++S G+ L+EL   + P
Sbjct:   26 IAEGSFGTVYKGKHLPTGNIMAVKIIALDEDETFEDLVVEIDILNRCNHNNIVKYYGSWVKGDELFIAMECCGGGSITEIYQELNIPLN----ESQIAYVCRETLKGLEYLHH---TNVIHRDLKGANILLTESGDVKLADFGVSGLLD--KSSKRNTFIGTPYWMAPEVIENRSNPVPYDTKADIWSLGITLIELAEAEPP 218          
The following BLAST results are available for this feature:
BLAST of FC929081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EPHA5_CHICK3.747e-1732.04Ephrin type-A receptor 5 OS=Gallus gallus GN=EPHA5... [more]
Y0146_DICDI4.894e-1733.17Probable serine/threonine-protein kinase DDB_G0270... [more]
WRK19_ARATH4.894e-1729.52Probable WRKY transcription factor 19 OS=Arabidops... [more]
TIE2_HUMAN4.894e-1733.33Angiopoietin-1 receptor OS=Homo sapiens GN=TEK PE=... [more]
TIE2_BOVIN4.894e-1733.33Angiopoietin-1 receptor OS=Bos taurus GN=TEK PE=2 ... [more]
SRMS_HUMAN4.894e-1731.25Tyrosine-protein kinase Srms OS=Homo sapiens GN=SR... [more]
IGF1R_BOVIN4.894e-1728.93Insulin-like growth factor 1 receptor (Fragment) O... [more]
EPHA5_HUMAN4.894e-1732.04Ephrin type-A receptor 5 OS=Homo sapiens GN=EPHA5 ... [more]
EPHA3_CHICK4.894e-1730.99Ephrin type-A receptor 3 OS=Gallus gallus GN=EPHA3... [more]
DST2_DICDI4.894e-1729.70Serine/threonine-protein kinase dst2 OS=Dictyostel... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CB10RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CB10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929081 ID=FC929081; Name=FC929081; organism=Citrus clementina; type=EST; length=854bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAGAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CGGTTGGGTGTTTCAGAAGATGAAGAAGGGACAGGCTGCTGATGTTCTAG
ATCCTACAGTCCTTACTGCAGATTCAAAGCCCATGATGCTTAAAATGCTC
CGGATTGCTGGTGATTGCCTCTCTGATAACCCTGCTATGAGGCCTACCAT
GCTG
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