FC929083

Overview
NameFC929083
Unique NameFC929083
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length798
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIL3_CHICK (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gallus gallus GN=PPIL3 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.124e-19
Identity = 55/134 (41.04%), Postives = 74/134 (55.22%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            G I +ELF + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+G +F DE +   KH+  G++SMAN GP TNGSQFF+       LD K+ VFG+V++G++ +  +E
Sbjct:   10 GDIKIELFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPLGTGKGGT-SIWGKKFEDEFSEYLKHSVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELE 132          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIL3_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans GN=CYP10 PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.045e-18
Identity = 57/134 (42.54%), Postives = 78/134 (58.21%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            G I +ELF +  PRTAENF ALC        SG+   Y G+ FHR I GFM Q            +SI+G  F+DE     +    G+++MANAGP TN SQFF+  A    LDGK+ +FG+V++GM+ + ++E
Sbjct:   10 GDIKIELFCESVPRTAENFLALCA-------SGQ---YDGTLFHRNIRGFMIQGGDPTGTGKGG-QSIWGRPFSDEIRQTLRFNNRGMVAMANAGPDTNKSQFFITYAKQPSLDGKYSIFGKVIDGMETLDSME 132          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIL3_RAT (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rattus norvegicus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.364e-18
Identity = 54/134 (40.30%), Postives = 73/134 (54.48%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            G I +E+F + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+G +F DE +   KH   G++SMAN GP TNGSQFF+       LD K+ VFG+V++G++ +  +E
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPTGTGRGG-SSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELE 132          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIL3_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo sapiens GN=PPIL3 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.364e-18
Identity = 54/134 (40.30%), Postives = 73/134 (54.48%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            G I +E+F + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+G +F DE +   KH   G++SMAN GP TNGSQFF+       LD K+ VFG+V++G++ +  +E
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCIFHRNIKGFMVQTGDPTGTGRGG-NSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELE 132          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIL2_ARATH (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.327e-18
Identity = 58/134 (43.28%), Postives = 74/134 (55.22%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            G + +EL  D+ PR  ENF  LC  E+G        +Y G +FHR I  FM Q            ESI+G  F DE N    H+G G++SMAN+GP TNGSQFFV   +   L+ KH VFG VV G+  + A+E
Sbjct:  353 GDLNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQGGDPTGTGKGG-ESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAME 475          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIL3_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus musculus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18
Identity = 53/134 (39.55%), Postives = 72/134 (53.73%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            G I +E+F + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+  +F DE +   KH   G++SMAN GP TNGSQFF+       LD K+ VFG+V++G++ +  +E
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPTGTGRGG-SSIWAKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELE 132          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIL2_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryptococcus neoformans GN=CYP8 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17
Identity = 59/136 (43.38%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVK---KHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            G + +EL  D  P+T  NF  L        K+GK   Y    FHR+IPGFM Q            ES +G  F DE+  K   KH   G+LSMAN+GP TNGSQFF     T  LDGKH VFG++V G + +  IE
Sbjct:  323 GPLNVELHGDRAPKTVYNFVQLA-------KAGK---YDNVVFHRLIPGFMVQGGDPTGTGRGG-ESYWGEPFRDEHGEKGAYKHDSRGVLSMANSGPRTNGSQFFFTFRPTPHLDGKHTVFGKLVGGEETLDKIE 447          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIL3_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibberella zeae GN=CYP10 PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.360e-17
Identity = 58/140 (41.43%), Postives = 74/140 (52.86%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXX----ESIYGSEFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVV--EGMDVVKAIE 797
            G I +E++ +  P+TAENF ALC    G G      +Y  S FHRVIP FM Q                 SI+G  F DE     +H   G+LSMAN GPGTNGSQFF+       LDG + VFG+V+  EG+  +  +E
Sbjct:   10 GDIKVEIYCESVPKTAENFLALC----GSG------YYDKSPFHRVIPKFMAQTGAPATPNPPENPKGGRSIWGGAFEDEIRPALRHGARGVLSMANKGPGTNGSQFFITFDKAPHLDGLNTVFGRVIGDEGLATLAKME 139          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIL6_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus musculus GN=Ppil6 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.388e-17
Identity = 43/102 (42.16%), Postives = 53/102 (51.96%), Query Frame = 3
Query:  363 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSM 668
            V+ D+ +   P GR++ EL+ D  PRT  NF+ LCTG  G  + G  LHYK S FHRV+     Q            ESIYG  F DENF   H   G+L M
Sbjct:  146 VYLDICIDLSPIGRLIFELYCDACPRTCTNFQVLCTGTSGFSERGTKLHYKDSIFHRVVQNGWIQGGDIVQGRGDDGESIYGPTFEDENFSIPHNKRGVLGM 247          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: CYP10_CAEEL (Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorhabditis elegans GN=cyn-10 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.388e-17
Identity = 55/136 (40.44%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  396 AGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVK--KHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            +G I +EL+ D  P+  ENF ALC  +          +Y G  FHR I  FM Q            ESI+G  F DE FV   KH   G +SMAN GP +N SQFF+  A    LD K+ +FG+V++G D ++ IE
Sbjct:    9 SGDIKIELYVDDAPKACENFLALCASD----------YYNGCIFHRNIKDFMVQTGDPTHSGKGG-ESIWGGPFEDE-FVSALKHDSRGCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGKVIDGFDTLEEIE 132          
The following BLAST results are available for this feature:
BLAST of FC929083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIL3_CHICK6.124e-1941.04Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gall... [more]
PPIL3_CRYNE1.045e-1842.54Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryp... [more]
PPIL3_RAT1.364e-1840.30Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ratt... [more]
PPIL3_HUMAN1.364e-1840.30Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo... [more]
PPIL2_ARATH2.327e-1843.28Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arab... [more]
PPIL3_MOUSE6.770e-1839.55Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus ... [more]
PPIL2_CRYNE1.155e-1743.38Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryp... [more]
PPIL3_GIBZE3.360e-1741.43Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibb... [more]
PPIL6_MOUSE4.388e-1742.16Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus ... [more]
CYP10_CAEEL4.388e-1740.44Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CB12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CB12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929083 ID=FC929083; Name=FC929083; organism=Citrus clementina; type=EST; length=798bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCAGAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAACACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCAAGGCCATCGAGA
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