FC929090

Overview
NameFC929090
Unique NameFC929090
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length748
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig982 contig Ccv1_Contig982:17..764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929090 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.980e-12
Identity = 52/150 (34.67%), Postives = 69/150 (46.00%), Query Frame = 3
Query:  147 GYKFQPSDXXXXXXXXXXXX-NPHFSHHPIKDIDHICSLEPWDLPTESKTESEDQVFYFFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIEAGNGLTGTKKFLTFYCRGPDSKVP--VKTDWVVHEYHAKDDPRYE-----KEFVLCCI 572
            G++F P+D               HFS   I DID +   +PWDLP  SK    ++ +YFF     KY N +R +R   +G WK T  D  I A     G KK L FY      K P   KT+W++HEY   +  R        ++VLC I
Sbjct:   17 GFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDID-LYKFDPWDLP--SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYA----GKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRI 159          
BLAST of FC929090 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.980e-12
Identity = 50/152 (32.89%), Postives = 75/152 (49.34%), Query Frame = 3
Query:  147 GYKFQPSDXXXXXXXXXXXX-NPHFSHHPIKDIDHICSLEPWDLPTESKTESEDQVFYFFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIEAGNG--LTGTKKFLTFY-CRGPDSKVPVKTDWVVHEYHAKDDPRY----EKEFVLCCITN 578
            G++F P+D             +   S   I ++D +   EPW+LP  +K    +  FY   +   KY    R +R T AG WK T KD ++ +G G  L G KK L FY  R P     +KT WV+HEY  ++D  +    ++E+V+C + N
Sbjct:   25 GFRFHPTDEELITFYLASKIFHGGLSGIHISEVD-LNRCEPWELPEMAKMGEREWYFYSLRDR--KYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRG---LKTKWVMHEYRLENDHSHRHTCKEEWVICRVFN 170          
BLAST of FC929090 vs. ExPASy Swiss-Prot
Match: NAC9_ARATH (Putative NAC domain-containing protein 9 OS=Arabidopsis thaliana GN=NAC009 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.504e-12
Identity = 52/130 (40.00%), Postives = 70/130 (53.85%), Query Frame = 3
Query:  147 GYKFQPSDXXXXXXXXXXXX--NPHFSHHPIKDIDHICSLEPWDLPTESKTESEDQVFYFFYEPR-YKYRNSNRVDRRTEAGQWKITSKDSQI--EAGNGLTGTKKFLTFYCRGPDSKVPVKTDWVVHEY 521
            G++F P+D              NP  S   I+ +D I   +PWDLP  + T  ++   ++FY PR  KYRNS+R +R T AG WK T  D  I    GN   G KK L FY +G  +K  VKTDW++HE+
Sbjct:   19 GFRFHPTDEELVSFYLKRKVQHNP-LSIELIRQLD-IYKYDPWDLPKFAMTGEKE---WYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFY-KGRAAK-GVKTDWMMHEF 141          
BLAST of FC929090 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11
Identity = 47/143 (32.87%), Postives = 66/143 (46.15%), Query Frame = 3
Query:  147 GYKFQPSDXXXXXXXXXXXX-NPHFSHHPIKDIDHICSLEPWDLPTESKTESEDQVFYFFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQI----------------EAGNGLTGTKKFLTFYC-RGPDSKVPVKTDWVVHEY 521
            G++F P+D             NP F+  PI ++D +   EPWDLP+++K   ++  +YFF     KY    R +R T+ G WK T KD +I                     L G KK L FY  R P      KT+WV+HE+
Sbjct:   22 GFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVD-LNKCEPWDLPSKAKMGEKE--WYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKG---TKTNWVMHEF 158          
BLAST of FC929090 vs. ExPASy Swiss-Prot
Match: NAC68_ARATH (NAC domain-containing protein 68 OS=Arabidopsis thaliana GN=NAC68 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.892e-11
Identity = 46/140 (32.86%), Postives = 76/140 (54.29%), Query Frame = 3
Query:  231 IKDIDHICSLEPWDLPTESKTESEDQVFYFFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQI--EAGNGLT-GTKKFLTFYCRGPDSKVP--VKTDWVVHEYHAKDDPRYEKEFVLCCIT-NGEASAYVDDGSETNTADN 632
            I +I+ +      DLP  ++ +SED  +YFF    Y   N  ++ R T +G WK T  D +I  + GNG+  G KK L ++    + K P  V+T WV+HEYH    P +++++V+C +   GEA+    + S +  +D+
Sbjct:   37 ISEINILSHKPSKDLPKLARIQSEDLEWYFFSPIEYTNPNKMKMKRTTGSGFWKPTGVDREIRDKRGNGVVIGIKKTLVYH----EGKSPHGVRTPWVMHEYHITCLPHHKRKYVVCQVKYKGEAAEISYEPSPSLVSDS 172          
BLAST of FC929090 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.892e-11
Identity = 52/174 (29.89%), Postives = 77/174 (44.25%), Query Frame = 3
Query:  132 SEMESGYKFQPSDXXXXXXXXXXXXNPH-FSHHPIKDIDHICSLEPWDLPTESKTESEDQV-FYFFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIEAGNGLTGTKKFLTFY-CRGPDSKVPVKTDWVVHEYHAKDDPRYEKEFVLCCITNGEASAYVDDGSETNTADNDAWV 644
            S++  G++F P++            N        I+++D +  LEPWD+  E +  S  Q  +YFF     KY    R +R T AG WK T +D  I +     G +K L FY  R P  +   K+DW++HEY   D P          ++NG A    +D    N    + WV
Sbjct:   14 SKVPPGFRFHPTEEELLHYYLRKKVNSQKIDLDVIREVD-LNKLEPWDIQEECRIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRRIGLRKTLVFYKGRAPHGQ---KSDWIMHEYRLDDTP----------MSNGYADVVTEDPMSYN---EEGWV 170          
BLAST of FC929090 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.506e-11
Identity = 44/138 (31.88%), Postives = 65/138 (47.10%), Query Frame = 3
Query:  132 SEMESGYKFQPSDXXXXXXXXXXXXNP-HFSHHPIKDIDHICSLEPWDLPTESKTESEDQV-FYFFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIEAGNGLTGTKKFLTFY-CRGPDSKVPVKTDWVVHEYHAKDD 536
            S++  G++F P++            N        I+D+D +  LEPWD+    K  +  Q  +YFF     KY    R +R T AG WK T +D  I +     G +K L FY  R P  +   K+DW++HEY   D+
Sbjct:   14 SQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVD-LNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKTLVFYKGRAPHGQ---KSDWIMHEYRLDDN 147          
BLAST of FC929090 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.191e-11
Identity = 44/129 (34.11%), Postives = 62/129 (48.06%), Query Frame = 3
Query:  231 IKDIDHICSLEPWDLPTESKTESEDQVFYFFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQI----EAGNGLTGTKKFLTFYCRGPDSKVPVKTDWVVHEYHAKDDPRYEKEFVLCCITNGEASAYVDD 605
            I D+D +   +PW+LP  +K    +Q +YFF     KY N  R +R   +G WK T  D  +      G+   G KK L FY   P     VK+DW++HEY   D+    K   +C   N + S  +DD
Sbjct:   49 IADVD-LYKFDPWELP--AKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPK--GVKSDWIMHEYRLTDN----KPTHICDFGNKKNSLRLDD 168          
BLAST of FC929090 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.392e-11
Identity = 55/184 (29.89%), Postives = 80/184 (43.48%), Query Frame = 3
Query:  147 GYKFQPSDXXXXXXXXXXXXNPH-FSHHPIKDIDHICSLEPWDLPTESKTESEDQVFYFFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIEAGNGLTGTKKFLTFYCRGPDSKVP--VKTDWVVHEYHAKDDPRYE-----KEFVLCCITNGEASA--------------YVDDGSETNTADN 632
            G++F P+D              H FS   I +ID +   +PW LP  SK    ++ +YFF     KY N +R +R   +G WK T  D  I       G KK L FY      K P   KT+W++HEY   +  R        ++VLC I   + SA              Y ++GS T+++ +
Sbjct:   17 GFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEID-LYKFDPWVLP--SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYI----GKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQTSAQKQAYNNLMTSGREYSNNGSSTSSSSH 193          
The following BLAST results are available for this feature:
BLAST of FC929090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
NAC72_ARATH4.980e-1234.67NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC31_ARATH4.980e-1232.89Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC9_ARATH6.504e-1240.00Putative NAC domain-containing protein 9 OS=Arabid... [more]
NAC77_ORYSJ1.449e-1132.87NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC68_ARATH1.892e-1132.86NAC domain-containing protein 68 OS=Arabidopsis th... [more]
NAC12_ARATH1.892e-1129.89NAC domain-containing protein 12 OS=Arabidopsis th... [more]
NAC43_ARATH5.506e-1131.88NAC domain-containing protein 43 OS=Arabidopsis th... [more]
NAC18_ARATH7.191e-1134.11NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC55_ARATH9.392e-1129.89NAC domain-containing protein 55 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DF07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DF07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929090 ID=FC929090; Name=FC929090; organism=Citrus clementina; type=EST; length=748bp
ATCACACACTCACACTCACACTCACTCTTTGGGTCTCCACTGTAACTGTT
CTGAATTAGTACCAGTCTTGGGGGGTTTCATCAGATCACTACCAGCAATT
GAAGAAGTGGTTATTGTAAAAAAAAAAAAAATCTGAAATGGAGAGTGGGT
ATAAATTCCAGCCATCTGATGAACTAATCCTCCGTCTTCTCAAGGAGAAG
AGGCTTAACCCCCATTTCTCACATCATCCTATCAAGGATATTGATCATAT
CTGCAGCCTTGAGCCATGGGACTTACCAACGGAATCAAAAACTGAGTCTG
AGGATCAAGTTTTTTACTTTTTCTATGAACCTCGTTACAAGTACAGGAAC
AGTAACCGGGTCGACAGAAGAACAGAAGCAGGGCAATGGAAAATTACCAG
TAAAGATTCCCAAATCGAAGCTGGAAACGGCCTTACCGGTACCAAAAAGT
TCTTGACTTTCTACTGCCGTGGTCCTGATTCTAAGGTACCAGTTAAGACC
GACTGGGTTGTGCATGAGTACCATGCCAAGGACGACCCCCGTTATGAGAA
GGAATTTGTTCTGTGTTGCATAACAAATGGAGAAGCTTCAGCTTATGTAG
ATGATGGCAGTGAGACAAACACTGCTGACAACGATGCATGGGTGGAAGAA
CGTTCTGTAATCTTAAGTAGCTTGTAAACAATTATAAAATCCTCTTAGGA
GGAAAGTACTGTAATTTTAANGAGGCATGCAAACAATTATGAAATCCT
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