FC929106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.072e-12 Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 1 Query: 37 TSSSAPSRKALSKIASNRLQKELVEWQVNPP----AGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSM 402 T+SS ++ ++S + R+Q+E+ E ++PP AG K DNL WI + G GT Y F L + FP YP + P+++F H ++ + G + ++IL DSWSPA+T++ V +I S+ Sbjct: 24 TASSWVAKTSVSA-SGKRIQREMAELNIDPPPDCSAGPKG---DNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVF-KTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSI 144
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.012e-12 Identity = 42/110 (38.18%), Postives = 58/110 (52.73%), Query Frame = 1 Query: 79 ASNRLQKELVEWQVNPPAGFKHKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 A RL + Q +PP G DN + W + G T + TF+L + F E YP + P V F+ HP+IY++G ICLDIL + WSP V++V SI S+L Sbjct: 5 AKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLL 113
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.012e-12 Identity = 43/140 (30.71%), Postives = 70/140 (50.00%), Query Frame = 1 Query: 70 SKIASNRLQKELVEWQVNPPAGFKHKVTDN--LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLSSSTVKQRPADND 444 S + L+K+L E Q NPP GF + D+ + W + + G TLY F + FP+ YP+ P++ F HP+++ NG +C+ IL+ + W P + ++ IS++SMLSS + PA+ D Sbjct: 3 SSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEI-WHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPN-DESPANID 140
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.240e-12 Identity = 38/115 (33.04%), Postives = 61/115 (53.04%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVT-DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +S A RL ++ + P G DN+ W + G P T + + +F L + F + YP + P V F+ HP+IY+NG +CLDIL + WSP V+++ S+ S+L+ Sbjct: 1 MSTAAKRRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFTDAYPNKPPTVRFISKM-FHPNIYANGELCLDILQNRWSPTYDVAAILTSVQSLLN 114
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.240e-12 Identity = 41/121 (33.88%), Postives = 62/121 (51.24%), Query Frame = 1 Query: 91 LQKELVEWQVNPPAGFKHKVTD--NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLS 408 LQK+L + +P GF + D N+ W + + G P TLY F + FP++YP P V F HP++Y +G +C+ IL+ + W+P TV S+ +SI+SMLS Sbjct: 9 LQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDI-WHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLS 128
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.844e-12 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 88 RLQKELVEWQVNPPAGFKHKVTDNLQRWI-IEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSS 411 R+ KE P G K + ++ R+ + + G + + TF+L++ PE YPM AP+V F+ HP++ G ICLDIL D WSPA+ + +V +SI ++LS+ Sbjct: 7 RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKI-YHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 114
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.844e-12 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 88 RLQKELVEWQVNPPAGFKHKVTDNLQRWI-IEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSS 411 R+ KE P G K + ++ R+ + + G + + TF+L++ PE YPM AP+V F+ HP++ G ICLDIL D WSPA+ + +V +SI ++LS+ Sbjct: 7 RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKI-YHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 114
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.844e-12 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 88 RLQKELVEWQVNPPAGFKHKVTDNLQRWI-IEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSS 411 R+ KE P G K + ++ R+ + + G + + TF+L++ PE YPM AP+V F+ HP++ G ICLDIL D WSPA+ + +V +SI ++LS+ Sbjct: 7 RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKI-YHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 114
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.844e-12 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 88 RLQKELVEWQVNPPAGFKHKVTDNLQRWI-IEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSS 411 R+ KE P G K + ++ R+ + + G + + TF+L++ PE YPM AP+V F+ HP++ G ICLDIL D WSPA+ + +V +SI ++LS+ Sbjct: 7 RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKI-YHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 114
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.844e-12 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 88 RLQKELVEWQVNPPAGFKHKVTDNLQRWI-IEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSS 411 R+ KE P G K + ++ R+ + + G + + TF+L++ PE YPM AP+V F+ HP++ G ICLDIL D WSPA+ + +V +SI ++LS+ Sbjct: 7 RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKI-YHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 114 The following BLAST results are available for this feature:
BLAST of FC929106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929106 ID=FC929106; Name=FC929106; organism=Citrus clementina; type=EST; length=767bpback to top |