FC929106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC_ASFP4 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=UBC PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.844e-12 Identity = 40/132 (30.30%), Postives = 66/132 (50.00%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKHKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--------SWSPAMTVSSVCISILSMLSSSTVKQRPADND 444 + S L E NP FK V +N + W + + G TLY F+ ++ FP +YP E P++ F HP+IYS+G +C+ IL+ +WSP + ++ +S++S+L+ PA+ D Sbjct: 1 MVSRFLMAEYRHLTENPSENFKVSVNENNMTEWDVILKGPADTLYEGGLFKAKIGFPPNYPYEPPRLTFTSEM-WHPNIYSDGRVCISILHGDNAEEQGMTWSPVQKIDTILLSVISLLNEPNT-DSPANVD 130
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.844e-12 Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 88 RLQKELVEWQVNPPAGFKHKVT-DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSS 411 R+ KE P G + DN++ + + + G + Y F+L++ PE YPM AP+V FL HP+I G ICLDIL D WSPA+ + +V +SI ++LS+ Sbjct: 9 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 116
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.844e-12 Identity = 33/85 (38.82%), Postives = 47/85 (55.29%), Query Frame = 1 Query: 151 TDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 ++N+ W + G GT Y F L + FP YP + P+ F P HP+I G IC++IL D W+PA+ V V +SIL +L Sbjct: 33 SNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPI-YHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLL 116
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.844e-12 Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 1 Query: 157 NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHI-YSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 N+ +W + G T Y F+L PE YP++ PQV FL HP++ + G ICLDIL ++WSPA T+ SVC +I+++++ Sbjct: 33 NIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKI-FHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMA 116
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.167e-11 Identity = 37/109 (33.94%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 82 SNRLQKELVEWQVNPPAGFK-HKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 S RLQ+EL ++ G DNL +W+ ++G T+Y + ++L ++FP YP + P V F P HP++ +G+ICLDIL ++W+ + V ++ +S+ S+L Sbjct: 32 SKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPC-WHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLL 139
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.167e-11 Identity = 42/137 (30.66%), Postives = 69/137 (50.36%), Query Frame = 1 Query: 43 SSAPSRKALSKIASNRLQKELVEWQVNPPAGFKHKVTD--NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICL------------DILYDSWSPAMTVSSVCISILSMLSS 411 ++AP+R+A S +S+ + + P GF+ D N+ W + + G P TLY F + FP++YP P V F HP++Y +G +C+ ++ + W+P TV S+ +SI+SMLSS Sbjct: 2 ATAPARRASSSRSSSEISR------TTPSMGFQLGFVDDSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEM-WHPNVYPDGRVCISIHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSS 131
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC_ASFB7 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.525e-11 Identity = 35/105 (33.33%), Postives = 57/105 (54.29%), Query Frame = 1 Query: 121 NPPAGFKHKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--------SWSPAMTVSSVCISILSMLS 408 NP FK V +N + W + + G P TLY F+ +V FP YP P++ F HP+IY +G +C+ IL+ +WSPA + ++ +S++S+L+ Sbjct: 16 NPSENFKISVNENNITEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPKLTFTSEM-WHPNIYPDGRLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLN 119
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11 Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 1 Query: 82 SNRLQKELVEWQVNPPAGFK-HKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDIL----YDSWSPAMTVSSVCISILSMLS 408 ++RL+KEL + PP G + D + ++ G T Y F L+V PE YP E PQV FL P HP+I S+G ICLDIL +W P++ +++V SI +++ Sbjct: 4 ASRLKKELHMLAIEPPPGITCWQEKDQVADLRAQILGGANTPYEKGVFTLEVIIPERYPFEPPQVRFLTPI-YHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMA 116
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC_ASFWA (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11 Identity = 35/105 (33.33%), Postives = 57/105 (54.29%), Query Frame = 1 Query: 121 NPPAGFKHKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--------SWSPAMTVSSVCISILSMLS 408 NP FK V +N + W + + G P TLY F+ +V FP YP P++ F HP+IY +G +C+ IL+ +WSPA + ++ +S++S+L+ Sbjct: 16 NPSENFKISVNENDMTEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPRLTFTSEM-WHPNIYPDGKLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLN 119
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11 Identity = 40/142 (28.17%), Postives = 73/142 (51.41%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKV------TDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDS--WSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRN 468 +S IA+ RL +E W+ + P GF K T NL W + G T++ + +++ F + +P P+ F PP HP++Y +G +CL +L ++ W P++++ + I I +L+ ++ PA + Y C+N Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPL-FHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIED-PAQAEAYQIYCQN 140 The following BLAST results are available for this feature:
BLAST of FC929106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929106 ID=FC929106; Name=FC929106; organism=Citrus clementina; type=EST; length=767bpback to top |