FC929106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11 Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 88 RLQKELVEWQVNPPAGFKHKVTD-NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSS 411 R+ KE P G ++ N++ + + + G + Y F+L++ PE YPM AP+V FL HP+I G ICLDIL D WSPA+ + +V +SI ++LS+ Sbjct: 9 RIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 116
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.601e-11 Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = 1 Query: 88 RLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSS 411 R+ KE P G TDN + + + ++G + + F L++ + YPM AP+V FL HP+I G ICLDIL D WSPA+ + +V +SI ++LS+ Sbjct: 7 RIIKETQRLMTEPAPGISATPATDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKI-YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 114
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.601e-11 Identity = 43/142 (30.28%), Postives = 70/142 (49.30%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN------LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRN 468 +S IA +RL +E W+ + P G T N L + G GT + F+L++ F + YP P+ F PP HP++Y +G +CL IL + W PA+T+ + + I +L+ + Q PA + Y C++ Sbjct: 1 MSGIALSRLAQERKAWRKDHPLGLVAVPTKNPDGTMNLMNGECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNI-QDPAQAEAYTIFCQD 140
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.397e-11 Identity = 41/133 (30.83%), Postives = 69/133 (51.88%), Query Frame = 1 Query: 91 LQKELVEWQVNPPAGFKHKVTDN--LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD-------------SWSPAMTVSSVCISILSMLSSSTVKQRPADND 444 L+K+L + + P GF + D+ + +W + V G P TLY F+ +DFP YP + P++ F+ HP+I G++C+ IL+D W P TV ++ +S++SML+ + PA+ D Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEI-WHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNF-ESPANVD 138
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.397e-11 Identity = 36/110 (32.73%), Postives = 56/110 (50.91%), Query Frame = 1 Query: 82 SNRLQKELVEWQVNPPAGFKH--KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 + RL+ EL+ ++ G NL W + G T Y F++ + FP +YP P +IF P HP++ +G+ICLDIL D WS V ++ +S+ S+L Sbjct: 30 TKRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPM-WHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLL 138
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.436e-11 Identity = 39/112 (34.82%), Postives = 60/112 (53.57%), Query Frame = 1 Query: 79 ASNRLQKELVEWQVNPPAGFK-HKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHI-YSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 A RLQKE+ + PP+ H V DNLQ+W V G G+ + F + +D P YP + P + F HP+I S+G IC ++ + +WSP + + V +I S+L+ Sbjct: 3 AHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKI-YHPNIKTSDGAICAEV-FSTWSPQLKILDVLTTIRSILT 112
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11 Identity = 37/110 (33.64%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 82 SNRLQKELVEWQVNPPAGFK-HKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 + RLQ EL++ + V DN L W+ + G T Y+ F++ + FP++YP P + FL P HP++ +G+ICLDIL + WS V ++ +S+ S+L Sbjct: 10 TKRLQNELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPM-WHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLL 118
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UB2R2_RABIT (Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus cuniculus GN=UBE2R2 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11 Identity = 38/121 (31.40%), Postives = 58/121 (47.93%), Query Frame = 1 Query: 91 LQKELVEWQVNPPAGFKHKVTD--NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLS 408 L EL Q P GF+ + D +L W + + G P TLY F+ + FP YP P FL HP+IY NG +C+ IL+ + W+P V ++ +S++S+L+ Sbjct: 13 LMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKM-WHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLN 132
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UB2R2_MOUSE (Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus GN=Ube2r2 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11 Identity = 38/121 (31.40%), Postives = 58/121 (47.93%), Query Frame = 1 Query: 91 LQKELVEWQVNPPAGFKHKVTD--NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLS 408 L EL Q P GF+ + D +L W + + G P TLY F+ + FP YP P FL HP+IY NG +C+ IL+ + W+P V ++ +S++S+L+ Sbjct: 13 LMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKM-WHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLN 132
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UB2R2_HUMAN (Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens GN=UBE2R2 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11 Identity = 38/121 (31.40%), Postives = 58/121 (47.93%), Query Frame = 1 Query: 91 LQKELVEWQVNPPAGFKHKVTD--NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLS 408 L EL Q P GF+ + D +L W + + G P TLY F+ + FP YP P FL HP+IY NG +C+ IL+ + W+P V ++ +S++S+L+ Sbjct: 13 LMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKM-WHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLN 132 The following BLAST results are available for this feature:
BLAST of FC929106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929106 ID=FC929106; Name=FC929106; organism=Citrus clementina; type=EST; length=767bpback to top |