FC929106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC9_XENLA (SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=ube2i PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN------LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRN 468 +S IA +RL +E W+ + P GF T N L W + G GT + F+L++ F + YP P+ F PP HP++Y +G +CL IL + W PA+T+ + + I +L+ + Q PA + Y C+N Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNI-QDPAQAEAYTIYCQN 140
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC9_SPETR (SUMO-conjugating enzyme UBC9 OS=Spermophilus tridecemlineatus GN=UBE2I PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN------LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRN 468 +S IA +RL +E W+ + P GF T N L W + G GT + F+L++ F + YP P+ F PP HP++Y +G +CL IL + W PA+T+ + + I +L+ + Q PA + Y C+N Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNI-QDPAQAEAYTIYCQN 140
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC9_RAT (SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus GN=Ube2i PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN------LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRN 468 +S IA +RL +E W+ + P GF T N L W + G GT + F+L++ F + YP P+ F PP HP++Y +G +CL IL + W PA+T+ + + I +L+ + Q PA + Y C+N Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNI-QDPAQAEAYTIYCQN 140
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC9_MOUSE (SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ube2i PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN------LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRN 468 +S IA +RL +E W+ + P GF T N L W + G GT + F+L++ F + YP P+ F PP HP++Y +G +CL IL + W PA+T+ + + I +L+ + Q PA + Y C+N Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNI-QDPAQAEAYTIYCQN 140
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC9_HUMAN (SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UBE2I PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN------LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRN 468 +S IA +RL +E W+ + P GF T N L W + G GT + F+L++ F + YP P+ F PP HP++Y +G +CL IL + W PA+T+ + + I +L+ + Q PA + Y C+N Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNI-QDPAQAEAYTIYCQN 140
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC9_CHICK (SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=UBE2I PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN------LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRN 468 +S IA +RL +E W+ + P GF T N L W + G GT + F+L++ F + YP P+ F PP HP++Y +G +CL IL + W PA+T+ + + I +L+ + Q PA + Y C+N Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNI-QDPAQAEAYTIYCQN 140
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC9B_DANRE (SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=ube2ib PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN------LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRN 468 +S IA +RL +E W+ + P GF T N L W + G GT + F+L++ F + YP P+ F PP HP++Y +G +CL IL + W PA+T+ + + I +L+ + Q PA + Y C+N Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNI-QDPAQAEAYTIYCQN 140
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC9A_DANRE (SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=ube2ia PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGF------KHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRN 468 +S IA +RL +E W+ + P GF T NL W + G GT + F+L++ F + YP P+ F PP HP++Y +G +CL IL + W PA+T+ + + I +L+ + Q PA + Y C+N Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPMKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNI-QDPAQAEAYTIYCQN 140
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 88 RLQKELVEWQVNPPAGFKHKVT-DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 RL ++ + Q +PPAG T DN+ W + G T + + TF+L ++F E YP + P V F+ HP++Y++G ICLDIL + WSP V+++ SI S+L Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKM-FHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLL 113
BLAST of FC929106 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+ KEL + +PPA V D++ W + G + Y F L + FP YP + P+V F HP+I SNG ICLDIL WSPA+T+S V +SI S+L Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI-YHPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110 The following BLAST results are available for this feature:
BLAST of FC929106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929106 ID=FC929106; Name=FC929106; organism=Citrus clementina; type=EST; length=767bpback to top |