FC929138

Overview
NameFC929138
Unique NameFC929138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15034 contig Ccv1_Contig15034:1..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.280e-63
Identity = 118/214 (55.14%), Postives = 151/214 (70.56%), Query Frame = 3
Query:   18 LTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            LT+  +L+AT+NF + NIIG GGFG VYKA L +G  +AVKKL+       +EF AE+E L + KH+NLV L GYC     ++L+Y +M NGSLD WL         L W KR  I  GA+ GLA++H    PHI+HRDIK+SNILL+  F+A VADFGL+RLI    THV+T++ GT GYIPPEYGQ+  +T RGDVYSFGV++LEL+TGK+P
Sbjct:  791 LTIFELLKATDNFSQANIIGCGGFGLVYKATLDNGTKLAVKKLTGDYGMMEKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRP 1004          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.378e-59
Identity = 115/217 (53.00%), Postives = 152/217 (70.05%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETL-----GKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            T   IL+AT+NF +  ++G GG+GTVY+  LPDG+ VAVKKL +  T+  +EF AEME L     G   H NLV L G+C  G EK+LV+EYM  GSL+  + ++T     L W KR  IA   ARGL FLHH   P I+HRD+KASN+LL++   A+V DFGLARL++  ++HVST IAGT GY+ PEYGQ+ ++TTRGDVYS+GV+ +EL TG++
Sbjct:  803 TYADILKATSNFSEERVVGRGGYGTVYRGVLPDGREVAVKKLQREGTEAEKEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILVHEYMGGGSLEELITDKTK----LQWKKRIDIATDVARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRR 1015          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 1.421e-58
Identity = 100/213 (46.95%), Postives = 149/213 (69.95%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            TL  +  ATN  C+ N+IG+GG+G VY+  L DG  VAVK L   + Q  +EF  E+E +G+V+H+NLV LLGYC  G  ++LVY+++ NG+L+ W+    G +  L WD R  I  G A+GLA+LH G  P ++HRDIK+SNILL+ ++ AKV+DFGLA+L+ +  ++V+T + GTFGY+ PEY  +G    + D+YSFG++++E++TG+ P
Sbjct:  143 TLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNP 355          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.571e-57
Identity = 103/213 (48.36%), Postives = 145/213 (68.08%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            TL  +  ATN F   N++G+GG+G VY+  L +G  VAVKKL     Q  +EF  E+E +G V+H+NLV LLGYC  G  ++LVYEY+ +G+L+ WL         L W+ R KI  G A+ LA+LH    P ++HRDIKASNIL+++EF AK++DFGLA+L+ + E+H++T + GTFGY+ PEY  +G    + D+YSFGV+LLE +TG+ P
Sbjct:  172 TLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDP 384          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.963e-56
Identity = 116/232 (50.00%), Postives = 158/232 (68.10%), Query Frame = 3
Query:    6 PLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPEFKDIEGGNLV 701
            P     ++  LE  N   + +IIG GGFGTVYK A+ DGK  A+K++ +      R F  E+E LG +KH+ LV L GYC+    KLL+Y+Y+  GSLD  L  R    E L WD R  I  GAA+GL++LHH  +P IIHRDIK+SNILL+   EA+V+DFGLA+L+   E+H++T +AGTFGY+ PEY QSGR+T + DVYSFGV++LE+++GK+PT   F + +G N+V
Sbjct:  293 PYSSKDIIKKLEMLN---EEHIIGCGGFGTVYKLAMDDGKVFALKRILKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHERG---EQLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIE-KGLNVV 517          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 8.620e-56
Identity = 111/217 (51.15%), Postives = 149/217 (68.66%), Query Frame = 3
Query:    9 LMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            L R +L  +  A++NF   NI+G GGFG VYK  L DG  VAVK+L + +TQG   +F  E+E +    H+NL+ L G+C    E+LLVY YM NGS+   LR R  S   L W KR +IA G+ARGLA+LH    P IIHRD+KA+NILL+EEFEA V DFGLA+L+   +THV+T + GT G+I PEY  +G+S+ + DV+ +GV+LLEL+TG++
Sbjct:  274 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 490          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.126e-55
Identity = 112/223 (50.22%), Postives = 154/223 (69.06%), Query Frame = 3
Query:   33 ILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPEFKDIEGGNLV 701
            I++   +  + +IIG GGFGTVYK ++ DG   A+K++ +      R F  E+E LG +KH+ LV L GYC+    KLL+Y+Y+  GSLD  L  R    E L WD R  I  GAA+GLA+LHH  +P IIHRDIK+SNILL+   EA+V+DFGLA+L+   E+H++T +AGTFGY+ PEY QSGR+T + DVYSFGV++LE+++GK PT   F + +G N+V
Sbjct:  297 IIKKLESLNEEHIIGCGGFGTVYKLSMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHKRG---EQLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIE-KGFNIV 515          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.276e-55
Identity = 108/216 (50.00%), Postives = 144/216 (66.67%), Query Frame = 3
Query:    9 LMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            L R +   I  AT+NF   NI+G GGFG VYK  LP+G  VAVK+L      G  +F  E+E +G   H+NL+ L G+C   EE++LVY YM NGS+   LR+  G    L W++R  IA GAARGL +LH    P IIHRD+KA+NILL+E FEA V DFGLA+L+   ++HV+T + GT G+I PEY  +G+S+ + DV+ FGV++LEL+TG K
Sbjct:  285 LKRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHK 500          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 3.276e-55
Identity = 110/217 (50.69%), Postives = 148/217 (68.20%), Query Frame = 3
Query:    9 LMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            L R TL  +L AT+NF   N++G GGFG VYK  L DG  VAVK+L + +T+G   +F  E+E +    H+NL+ L G+C    E+LLVY YM NGS+   LR R      L W KR  IA G+ARGLA+LH      IIHRD+KA+NILL+EEFEA V DFGLA+L++  ++HV+T + GT G+I PEY  +G+S+ + DV+ +GV+LLEL+TG+K
Sbjct:  279 LKRFTLRELLVATDNFSNKNVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQK 495          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.773e-54
Identity = 112/220 (50.91%), Postives = 150/220 (68.18%), Query Frame = 3
Query:   15 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDI---AGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPT 662
            ++ L  +++AT  F K NII  G  GT+YK  L DG  + +K+L  ++ +  +EF AEM+TLG VK++NLVPLLGYC   +E+LL+YEYM NG L D        S + L W  R KIA G A+GLA+LHH   P IIHR+I +  ILL  EFE K++DFGLARL++  +TH+ST +    G FGY+ PEY ++  +T +GDVYSFGV+LLELVTG+K T
Sbjct:  290 KMKLSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLLMIKRLQDSQ-RSEKEFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISDFGLARLMNPIDTHLSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVTGQKAT 508          
The following BLAST results are available for this feature:
BLAST of FC929138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PSYR1_ARATH7.280e-6355.14Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
Y1743_ARATH6.378e-5953.00Probable LRR receptor-like serine/threonine-protei... [more]
Y1154_ARATH1.421e-5846.95Probable serine/threonine-protein kinase At1g01540... [more]
Y2296_ARATH4.571e-5748.36Probable receptor-like protein kinase At2g42960 OS... [more]
FEI1_ARATH2.963e-5650.00LRR receptor-like serine/threonine-protein kinase ... [more]
BAK1_ARATH8.620e-5651.15BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
FEI2_ARATH1.126e-5550.22LRR receptor-like serine/threonine-protein kinase ... [more]
Y5457_ARATH3.276e-5550.00Probable LRR receptor-like serine/threonine-protei... [more]
SERK4_ARATH3.276e-5550.69Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
Y5838_ARATH2.773e-5450.91Probably inactive leucine-rich repeat receptor-lik... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CE03RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CE03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929138 ID=FC929138; Name=FC929138; organism=Citrus clementina; type=EST; length=702bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAAAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CG
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