FC929138

Overview
NameFC929138
Unique NameFC929138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15034 contig Ccv1_Contig15034:1..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.274e-48
Identity = 102/219 (46.58%), Postives = 139/219 (63.47%), Query Frame = 3
Query:   15 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL-ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGP 668
            R+ LV + EATN+F +   IG GGFG VYK  L DG  VAVK+ +    QG  EF  E+E L + +H++LV L+GYC    E +LVYEYM NG+L   L      L  L W +R +I  G+ARGL +LH G    +IHRD+K++NILL+E   AKVADFGL++      +THVST + G+FGY+ PEY +  + T + DVYSFGV++ E++  +    P
Sbjct:  469 RIPLVAVKEATNSFDENRAIGVGGFGKVYKGELHDGTKVAVKRANPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYG--SGLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDP 685          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.274e-48
Identity = 98/219 (44.75%), Postives = 145/219 (66.21%), Query Frame = 3
Query:   15 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAAL--PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTG-SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPT 662
            RL    +  AT+ F +  I+G GGFGTV++  L  P    +AVKK++    QG REF AE+E+LG+++H+NLV L G+C    + LL+Y+Y+ NGSLD  L +R   S  VL W+ R+KIA G A GL +LH  +   +IHRDIK SN+L+ ++   ++ DFGLARL        +T + GT GY+ PE  ++G+S++  DV++FGV+LLE+V+G++PT
Sbjct:  348 RLRYKDLYAATDGFKENRIVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGVREFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPT 566          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.969e-48
Identity = 101/216 (46.76%), Postives = 140/216 (64.81%), Query Frame = 3
Query:   15 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR--LISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            R T   ++E T N  +   +G+GGFG VY   L   + VAVK LSQ   QG++EF AE+E L +V H NLV L+GYC   +   L+YEYM NG L   L  + G   VL W  R +IA  AA GL +LH G  P ++HRD+K++NILL+EEF+AK+ADFGL+R   +   ++ VST +AGT GY+ PEY  +   + + DVYSFG++LLE++T ++
Sbjct:  555 RFTYSEVMEMTKNLQRP--LGEGGFGVVYHGDLNGSEQVAVKLLSQTSAQGYKEFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLSGKHGG-SVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQR 767          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.969e-48
Identity = 103/223 (46.19%), Postives = 141/223 (63.23%), Query Frame = 3
Query:   42 ATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRN--RTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVST-DIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPEFKDIEGGNLV 701
            AT NF   N +G GGFG VYK   P+G  VAVK+LS+   QG  EF  E+  + K++H+NLV LLGY   G+EK+LVYE++ N SLD +L +  + G L+   W +RY I  G  RG+ +LH      IIHRD+KA NILL+ +   K+ DFG+AR     +T  +T  + GT GY+PPEY  +G+ +T+ DVYSFGV++LE++ GKK +     D    NLV
Sbjct:  308 ATCNFHNVNKLGHGGFGEVYKGTFPNGTEVAVKRLSKTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDPVKKGQLD---WTRRYNIINGITRGIVYLHQDSRLTIIHRDLKAGNILLDADMNPKIVDFGVARNFRVDQTEATTARVVGTIGYMPPEYVTNGQFSTKSDVYSFGVLILEIIGGKKNSSINETDGSISNLV 527          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.878e-48
Identity = 101/219 (46.12%), Postives = 140/219 (63.93%), Query Frame = 3
Query:   15 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL-ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGP 668
            R+    + +ATNNF ++  IG GGFG VYK  L DG  VAVK+ +    QG  EF  E+E L + +H++LV L+GYC    E +L+YEYM NG++   L      L  L W +R +I  GAARGL +LH G +  +IHRD+K++NILL+E F AKVADFGL++      +THVST + G+FGY+ PEY +  + T + DVYSFGV+L E++  +    P
Sbjct:  472 RIPFAAVKDATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYG--SGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVIDP 688          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.065e-48
Identity = 98/214 (45.79%), Postives = 141/214 (65.89%), Query Frame = 3
Query:   15 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS-ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK 653
            R T   +++ TNNF +  ++G+GGFG V    +   + VAVK LSQ+ +QG++ F AE++ L +V H NLV L+GYC   +   L+YE++  G L   L  ++G    + W  R +IA  AA GL +LH G TP I+HRDIK +NILL+E+ +AK+ADFGL+R      ETH+ST +AGT GY+ PEY Q+ R   + DVYSFG++LLE++T +
Sbjct:  568 RFTYSEVIKMTNNFQR--VVGEGGFGVVCHGTINGSEQVAVKVLSQSSSQGYKHFKAEVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSGKSGG-SFINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQ 778          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.065e-48
Identity = 98/213 (46.01%), Postives = 135/213 (63.38%), Query Frame = 3
Query:   33 ILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPE 671
            I+  T N  +  IIG G   TVYK  L + K VA+K+L     Q  ++F  E+E L  +KH+NLV L  Y       LL Y+Y+ NGSL   L   T   + L WD R KIA GAA+GLA+LHH  +P IIHRD+K+SNILL+++ EA++ DFG+A+ +   ++H ST + GT GYI PEY ++ R T + DVYS+G++LLEL+T +K    E
Sbjct:  641 IMRMTENLSEKYIIGHGASSTVYKCVLKNCKPVAIKRLYSHNPQSMKQFETELEMLSSIKHRNLVSLQAYSLSHLGSLLFYDYLENGSLWDLLHGPTKK-KTLDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAVDDE 852          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 191.045 bits (484), Expect = 5.065e-48
Identity = 97/202 (48.02%), Postives = 139/202 (68.81%), Query Frame = 3
Query:   66 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR-LISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTG 665
            NIIG GG G VY+ ++P+   VA+K+L    T +    FTAE++TLG+++H+++V LLGY +  +  LL+YEYM NGSL   L    G    L W+ R+++A  AA+GL +LHH  +P I+HRD+K++NILL+ +FEA VADFGLA+ L+    +   + IAG++GYI PEY  + +   + DVYSFGV+LLEL+ GKKP G
Sbjct:  696 NIIGKGGAGIVYRGSMPNNVDVAIKRLVGRGTGRSDHGFTAEIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSKGGH--LQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVG 895          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.065e-48
Identity = 107/227 (47.14%), Postives = 145/227 (63.88%), Query Frame = 3
Query:    9 LMRLTLVHILEATNNFCKTNIIGDGGFGTVYK---------AALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL-ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            L   T   +  AT NF + N++G+GGFG V+K         A+ P  G  VAVK+L     QGH+E+  E+  LG++ H NLV L+GYC+ GE +LLVYE+M  GSL+  L  R    + L W  R K+A GAA+GL FLH      +I+RD KA+NILL+ +F AK++DFGLA+   +   THVST + GT GY  PEY  +GR T + DVYSFGV+LLEL++G++
Sbjct:   71 LKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRR--GAQPLTWAIRMKVAVGAAKGLTFLHEA-KSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRR 294          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.615e-48
Identity = 100/217 (46.08%), Postives = 139/217 (64.06%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPE 671
            +L  + EAT NF  + IIG GGFG VY   L DG  VAVK+ +    QG  EF  E++ L K++H++LV L+GYC    E +LVYE+M NG     L  +  +L  L W +R +I  G+ARGL +LH G    IIHRD+K++NILL+E   AKVADFGL++ ++  + HVST + G+FGY+ PEY +  + T + DVYSFGV+LLE +  +    P+
Sbjct:  515 SLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGK--NLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQ 729          
The following BLAST results are available for this feature:
BLAST of FC929138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5597_ARATH2.274e-4846.58Probable receptor-like protein kinase At5g59700 OS... [more]
LRKA2_ARATH2.274e-4844.75Lectin-domain containing receptor kinase A4.2 OS=A... [more]
MEE39_ARATH2.969e-4846.76Probable LRR receptor-like serine/threonine-protei... [more]
CRK24_ARATH2.969e-4846.19Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
HERK_ARATH3.878e-4846.12Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
PAM74_ARATH5.065e-4845.79Probable LRR receptor-like serine/threonine-protei... [more]
ERECT_ARATH5.065e-4846.01LRR receptor-like serine/threonine-protein kinase ... [more]
CLV1_ARATH5.065e-4848.02Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
APK2A_ARATH5.065e-4847.14Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y4391_ARATH6.615e-4846.08Probable receptor-like protein kinase At4g39110 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CE03RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CE03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929138 ID=FC929138; Name=FC929138; organism=Citrus clementina; type=EST; length=702bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAAAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CG
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