FC929138

Overview
NameFC929138
Unique NameFC929138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15034 contig Ccv1_Contig15034:1..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.615e-48
Identity = 99/217 (45.62%), Postives = 138/217 (63.59%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPE 671
            +L  + E T NF  + IIG GGFG VY   + DG  VA+K+ +    QG  EF  E++ L K++H++LV L+GYC    E +LVYEYM NG     L  +  +L  L W +R +I  GAARGL +LH G    IIHRD+K++NILL+E   AKVADFGL++ ++  + HVST + G+FGY+ PEY +  + T + DVYSFGV+LLE +  +    P+
Sbjct:  514 SLSELQEVTKNFDASEIIGVGGFGNVYIGTIDDGTQVAIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYGK--NLSPLTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQ 728          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.615e-48
Identity = 109/219 (49.77%), Postives = 146/219 (66.67%), Query Frame = 3
Query:   66 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHRE----------FTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSL-DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL--ISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPEFKD 680
            N+IG G  G VYK  L  G+ VAVKKL+++   G  E          F AE+ETLG ++H+++V L   CS G+ KLLVYEYM NGSL D+   +R G + VLGW +R +IA  AA GL++LHH   P I+HRD+K+SNILL+ ++ AKVADFG+A++  +S  +T    + IAG+ GYI PEY  + R   + D+YSFGV+LLELVTGK+PT  E  D
Sbjct:  687 NVIGFGSSGKVYKVELRGGEVVAVKKLNKSVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKGGV-VLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTDSELGD 904          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.615e-48
Identity = 104/227 (45.81%), Postives = 145/227 (63.88%), Query Frame = 3
Query:    9 LMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPD----------GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR-LISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            L   +   +  AT NF   +++G+GGFG V+K  + +          G  +AVKKL+Q   QGH+E+ AE+  LG+  H++LV L+GYC   E +LLVYE+M  GSL+  L  R    + L W  R K+A GAA+GLAFLH   T  +I+RD K SNILL+ E+ AK++DFGLA+      ++HVST + GT GY  PEY  +G  TT+ DVYSFGV+LLEL++G++
Sbjct:   53 LKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHSSET-RVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRR 278          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.640e-48
Identity = 101/221 (45.70%), Postives = 140/221 (63.35%), Query Frame = 3
Query:   12 MRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC--ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGP 668
            +R++   +   TNNF ++ +IG GGFG V++ +L D   VAVK+ S    QG  EF +E+  L K++H++LV L+GYC    E +LVYEYM  G L   L   T     L W +R ++  GAARGL +LH G +  IIHRDIK++NILL+  + AKVADFGL+R    C  ETHVST + G+FGY+ PEY +  + T + DVYSFGV+L E++  +    P
Sbjct:  475 LRISFAELQSGTNNFDRSLVIGVGGFGMVFRGSLKDNTKVAVKRGSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYGSTN--PPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSR-SGPCIDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDP 692          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.640e-48
Identity = 101/220 (45.91%), Postives = 142/220 (64.55%), Query Frame = 3
Query:   12 MRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGP 668
            + +    IL ATNNF +  +IG GGFG VYKA LPDG   A+K+      QG  EF  E++ L +++H++LV L GYC    E +LVYE+M  G+L   L     +L  L W +R +I  GAARGL +LH  G    IIHRD+K++NILL+E   AKVADFGL+++ +  E+++S +I GTFGY+ PEY Q+ + T + DVY+FGV+LLE++  +    P
Sbjct:  474 LTIPFTDILSATNNFDEQLLIGKGGFGYVYKAILPDGTKAAIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYG--SNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNISINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDP 691          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 8.640e-48
Identity = 99/213 (46.48%), Postives = 138/213 (64.79%), Query Frame = 3
Query:   66 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR------EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI--SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPEFKD 680
            N+IG G  G VYKA +P+G  VAVKKL + K            F AE++ LG ++H+N+V LLGYCS    KLL+Y Y  NG+L   L+        L W+ RYKIA GAA+GLA+LHH   P I+HRD+K +NILL+ ++EA +ADFGLA+L+  S    +  + +AG++GYI PEYG +   T + DVYS+GV+LLE+++G+    P+  D
Sbjct:  776 NVIGKGCSGIVYKAEIPNGDIVAVKKLWKTKDNNEEGESTIDSFAAEIQILGNIRHRNIVKLLGYCSNKSVKLLLYNYFPNGNLQQLLQGNRN----LDWETRYKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVEPQIGD 984          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.640e-48
Identity = 100/214 (46.73%), Postives = 143/214 (66.82%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI-SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            TL +I  AT  +    +IG+GGFG+VY+  L DG+ VAVK  S   TQG REF  E+  L  ++H+NLVPLLGYC+  ++++LVY +M NGSL   L       ++L W  R  IA GAARGLA+LH      +IHRD+K+SNILL+    AKVADFG ++      +++VS ++ GT GY+ PEY ++ + + + DV+SFGV+LLE+V+G++P
Sbjct:  586 TLEYIELATEKY--KTLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREP 797          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.128e-47
Identity = 104/216 (48.15%), Postives = 144/216 (66.67%), Query Frame = 3
Query:   15 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTG--SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA-CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK 653
            + T   +L+ T NF    ++G GGFGTVY   L D + VAVK LS +  QG++EF AE+E L +V H++LV L+GYC  G+   L+YEYM  G L     N +G  S+ VL W+ R +IA  AA+GL +LH+G  P ++HRD+K +NILLNE  +AK+ADFGL+R      E+HV T +AGT GY+ PEY ++   + + DVYSFGV+LLE+VT +
Sbjct:  559 KFTYSEVLKMTKNF--ERVLGKGGFGTVYHGNLDDTQ-VAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLR---ENMSGKHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQ 768          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.128e-47
Identity = 103/219 (47.03%), Postives = 142/219 (64.84%), Query Frame = 3
Query:   66 NIIGDGGFGTVYKAALPDGKTVAVKKL---SQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLD--LWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-----IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPEF---KDI 683
            NIIG GG G VY+  L  G+T+AVKKL   +  KT+    F +E+ETLG+V+H N+V LL  C+  E + LVYE+M NGSL   L       ++  L W  R+ IA GAA+GL++LHH   P I+HRD+K++NILL+ E + +VADFGLA+ +   +    +D     +AG++GYI PEYG + +   + DVYSFGV+LLEL+TGK+P    F   KDI
Sbjct:  690 NIIGSGGSGLVYRVKLKSGQTLAVKKLWGETGQKTESESVFRSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGDVLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRPNDSSFGENKDI 908          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.474e-47
Identity = 101/228 (44.30%), Postives = 138/228 (60.53%), Query Frame = 3
Query:   15 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKL-------------SQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE-THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            R T   +   TNNF K  +IG GGFG VY  +L DG  +AVK +             S + +Q  +EF  E E L  V H+NL   +GYC  G    L+YEYM NG+L  +L +     E L W+KR  IA  +A+GL +LHHG  P I+HRD+K +NILLN+  EAK+ADFGL+++    + +HV T + GT GY+ PEY  + +   + DVYSFG++LLEL+TGK+
Sbjct:  556 RFTYSEVSSITNNFNK--VIGKGGFGIVYLGSLEDGTEIAVKMINDSSFGKSKGSSSSSSSSQVSKEFQVEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYLSSENA--EDLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKR 779          
The following BLAST results are available for this feature:
BLAST of FC929138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2214_ARATH6.615e-4845.62Probable receptor-like protein kinase At2g21480 OS... [more]
RLK5_ARATH6.615e-4849.77Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
APK1A_ARATH6.615e-4845.81Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y5241_ARATH8.640e-4845.70Probable receptor-like protein kinase At5g24010 OS... [more]
Y2232_ARATH8.640e-4845.91Probable receptor-like protein kinase At2g23200 OS... [more]
Y1341_ARATH8.640e-4846.48Probable LRR receptor-like serine/threonine-protei... [more]
NORK_PEA8.640e-4846.73Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y5189_ARATH1.128e-4748.15Probable LRR receptor-like protein kinase At1g5189... [more]
HSL2_ARATH1.128e-4747.03LRR receptor-like serine/threonine-protein kinase ... [more]
Y4291_ARATH1.474e-4744.30Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CE03RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CE03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929138 ID=FC929138; Name=FC929138; organism=Citrus clementina; type=EST; length=702bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAAAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CG
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