FC929138

Overview
NameFC929138
Unique NameFC929138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15034 contig Ccv1_Contig15034:1..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.474e-47
Identity = 99/212 (46.70%), Postives = 140/212 (66.04%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS-ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK 653
            T   +   TNNF +   +G+GGFG VY   + D + VAVK LS++  QG+++F AE++ L +V H NLV L+GYC  G+  +L+YEYM NG+L   L     S   L W+ R +IA   A+GL +LH G  P +IHRDIK+ NILL+  F+AK+ DFGL+R      ETHVST++AG+ GY+ PEY ++   T + DV+SFGV+LLE++T +
Sbjct:  582 TYEEVAVITNNFERP--LGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGE-NSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQ 790          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.925e-47
Identity = 100/214 (46.73%), Postives = 134/214 (62.62%), Query Frame = 3
Query:   15 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS-ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK 653
            R T   +   T+NF    ++G+GGFG VY   L   + +AVK LSQ+  QG++EF AE+E L +V H NLV L+GYC       L+YEY  NG L   L    G    L W  R KI    A+GL +LH G  P ++HRD+K +NILL+E F+AK+ADFGL+R      ETHVST +AGT GY+ PEY ++ R   + DVYSFG++LLE++T +
Sbjct:  562 RFTYSEVEALTDNF--ERVLGEGGFGVVYHGILNGTQPIAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGERGG-SPLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSR 772          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.514e-47
Identity = 101/208 (48.56%), Postives = 138/208 (66.35%), Query Frame = 3
Query:   42 ATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPT 662
            ATNNF +   +G GG G V+K  LPDGK +AVK+LS+   Q  +EF  E+  + K++H+NLV LLG+   GEEK++VYEY+ N SLD  L + T   E L W KRYKI  G ARG+ +LH    P IIHRD+KA NILL+     KVADFG AR+    ++  ++ + AGT GY+ PEY + G  + + DVYS+GV++LE++ GK+ T
Sbjct:  356 ATNNFSER--LGHGGSGHVFKGRLPDGKEIAVKRLSEKTEQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFDPTKQGE-LDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIFGMDQSVAITANAAGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKRNT 560          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.514e-47
Identity = 106/228 (46.49%), Postives = 143/228 (62.72%), Query Frame = 3
Query:    6 PLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPD----------GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE-THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            P+   T   +  AT NF   ++IG+GGFG V+K  L +          G  +AVKKL+Q   QGHRE+  E+  LG++ H NLV L+GYC   E +LLVYE+M  GSL+  L  R    + L W  R  +A  AA+GLAFLH      +I+RDIKASNILL+ ++ AK++DFGLAR     + ++VST + GT+GY  PEY  SG    R DVYSFGV+LLE+++GK+
Sbjct:   51 PVKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSD-PVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKR 277          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.514e-47
Identity = 107/228 (46.93%), Postives = 144/228 (63.16%), Query Frame = 3
Query:    9 LMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKT-----------VAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL-ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            L   T   +  AT NF   +++G+GGFG V+K  + DG T           VAVKKL     QGH+E+  E+  LG++ H NLV L+GYC  GE +LLVYE+M  GSL+  L  R    + L W  R K+A GAA+GL FLH      +I+RD KA+NILL+ EF +K++DFGLA+   +  +THVST + GT GY  PEY  +GR T + DVYSFGV+LLEL++G++
Sbjct:   68 LKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWI-DGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRR--GAQPLTWAIRMKVAIGAAKGLTFLHDA-KSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRR 291          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.283e-47
Identity = 94/215 (43.72%), Postives = 135/215 (62.79%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            T+  +  ATN+F + NIIG+G  G VY+A  P+GK +A+KK+  A    Q    F   +  + +++H N+VPL GYC+   ++LLVYEY+ NG+LD  L         L W+ R K+A G A+ L +LH    P I+HR+ K++NILL+EE    ++D GLA L    E  VST + G+FGY  PE+  SG  T + DVY+FGV++LEL+TG+KP
Sbjct:  384 TVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKP 598          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 4.288e-47
Identity = 101/216 (46.76%), Postives = 139/216 (64.35%), Query Frame = 3
Query:   12 MRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            ++  L  I  AT+NF + N +G GGFG VYK  L +G  +AVK+LS+   QG  EF  E+  + K++H NLV LLG+   GEEKLLVYE++ N SLD +L + T     L W  R  I  G  RG+ +LH      IIHRD+KASNILL+ +   K+ADFG+AR+    +T  +T  + GTFGY+ PEY   G+ + + DVYSFGV++LE+++GKK
Sbjct:  325 VQFDLKTIESATSNFSERNKLGKGGFGEVYKGMLMNGTEIAVKRLSKTSGQGEVEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVSNKSLDYFLFDPT-KRNQLDWTMRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTGRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKK 539          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.600e-47
Identity = 101/214 (47.20%), Postives = 139/214 (64.95%), Query Frame = 3
Query:   15 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS-ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK 653
            R T   +L  T  F    ++G GGFG VY   +   + VAVK LS +  QG++EF  E+E L +V H NLV L+GYC   +   L+Y+YMVNG L    ++ +GS  ++ W  R  IA  AA GL +LH G  P I+HRD+K+SNILL+++ +AK+ADFGL+R      E+HVST +AGTFGY+  EY Q+ R + + DVYSFGV+LLE++T K
Sbjct:  559 RYTYAEVLAMTKKF--ERVLGKGGFGMVYHGYINGTEEVAVKLLSPSSAQGYKEFKTEVELLLRVYHTNLVSLVGYCDEKDHLALIYQYMVNGDLK---KHFSGS-SIISWVDRLNIAVDAASGLEYLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNK 766          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 7.314e-47
Identity = 103/214 (48.13%), Postives = 137/214 (64.02%), Query Frame = 3
Query:   39 EATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSL-----EVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI--SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            + T+NF    +IG+G +G VY   L  G+  A+KKL  +K Q  REF A++  + ++K +N+V LLGYC  G  ++L YEY  NGSL   L  R G        VL W +R KIA GAA+GL +LH    PHIIHRDIK+SNILL ++  AK+ADF L+      A   H ST + GTFGY  PEY  +G+ +++ DVYSFGV+LLEL+TG+KP
Sbjct:   63 DITDNFGSKALIGEGSYGRVYHGVLKSGRAAAIKKLDSSK-QPDREFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLH-STRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKP 274          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.248e-46
Identity = 103/219 (47.03%), Postives = 140/219 (63.93%), Query Frame = 3
Query:   15 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL-ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGP 668
            R  L  I EAT++F ++ +IG GGFG VYK  L D   VAVK+ +    QG  EF  E+E L + +H++LV L+GYC    E ++VYEYM  G+L   L +       L W +R +I  GAARGL +LH G T  IIHRD+K++NILL++ F AKVADFGL++      +THVST + G+FGY+ PEY    + T + DVYSFGV++LE+V G+    P
Sbjct:  474 RYPLALIKEATDDFDESLVIGVGGFGKVYKGVLRDKTEVAVKRGAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDLDDKPR-LSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDP 691          
The following BLAST results are available for this feature:
BLAST of FC929138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y4245_ARATH1.474e-4746.70Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH1.925e-4746.73Probable LRR receptor-like serine/threonine-protei... [more]
CRK13_ARATH2.514e-4748.56Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
BIK1_ARATH2.514e-4746.49Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
APK2B_ARATH2.514e-4746.93Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
SRF8_ARATH3.283e-4743.72Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
CRK18_ARATH4.288e-4746.76Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
Y1756_ARATH5.600e-4747.20Probable LRR receptor-like serine/threonine-protei... [more]
PTI1_SOLLC7.314e-4748.13Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y2393_ARATH1.248e-4647.03Probable receptor-like protein kinase At2g39360 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CE03RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CE03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929138 ID=FC929138; Name=FC929138; organism=Citrus clementina; type=EST; length=702bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAAAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CG
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