FC929138

Overview
NameFC929138
Unique NameFC929138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15034 contig Ccv1_Contig15034:1..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.622e-54
Identity = 106/206 (51.46%), Postives = 143/206 (69.42%), Query Frame = 3
Query:   42 ATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            ATN F ++N +G GGFG VYK  L  G+TVA+K+LSQ  TQG  EF  E++ + K++H+NL  LLGYC  GEEK+LVYE++ N SLD +L +      VL W +RYKI  G ARG+ +LH      IIHRD+KASNILL+ +   K++DFG+AR+    +T  +T  I GT+GY+ PEY   G+ + + DVYSFGV++LEL+TGKK
Sbjct:  343 ATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNE-KRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTYGYMSPEYAIHGKYSVKSDVYSFGVLVLELITGKK 547          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.068e-54
Identity = 108/217 (49.77%), Postives = 147/217 (67.74%), Query Frame = 3
Query:    9 LMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            L R +L  +  AT++F   NI+G GGFG VYK  L DG  VAVK+L + +T G   +F  E+E +    H+NL+ L G+C    E+LLVY YM NGS+   LR R  S   L W  R +IA G+ARGL++LH    P IIHRD+KA+NILL+EEFEA V DFGLARL+   +THV+T + GT G+I PEY  +G+S+ + DV+ +G++LLEL+TG++
Sbjct:  290 LKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR 506          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.797e-53
Identity = 104/214 (48.60%), Postives = 143/214 (66.82%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE-THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            T   + + TNNF   N +G GG+G VYK  LP+G+ +A+K+  Q   QG  EF  E+E L +V H+N+V LLG+C   +E++LVYEY+ NGSL   L  + G    L W +R KIA G+ +GLA+LH    P IIHRD+K++NILL+E   AKVADFGL++L+   E  HV+T + GT GY+ PEY  + + T + DVY FGV++LEL+TGK P
Sbjct:  623 TFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNG--VKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSP 834          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.797e-53
Identity = 111/231 (48.05%), Postives = 150/231 (64.94%), Query Frame = 3
Query:   12 MRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVST-DIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPEFKDIEGGNLV 701
            ++  L  I  AT  F K N++G GGFG V+K  L DG  +AVK+LS+   QG +EF  E   + K++H+NLV +LG+C  GEEK+LVYE++ N SLD +L   T   + L W KRYKI  G ARG+ +LHH     IIHRD+KASNILL+ E E KVADFG+AR+    ++   T  + GT GYI PEY   G+ + + DVYSFGV++LE+++GK+ +     D  G NLV
Sbjct:  307 LQYDLKTIEAATCTFSKCNMLGQGGFGEVFKGVLQDGSEIAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKGQ-LDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKRNSNFHETDESGKNLV 536          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.066e-53
Identity = 106/222 (47.75%), Postives = 148/222 (66.67%), Query Frame = 3
Query:   42 ATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVST-DIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGP-EFKDIEGGNLV 701
            ATN FC+TN +G GGFG VYK   P G  VAVK+LS+   QG REF  E+  + K++H+NLV LLG+C   +E++LVYE++ N SLD ++ + T    +L W +RYKI  G ARG+ +LH      IIHRD+KA NILL ++  AK+ADFG+AR+    +T  +T  I GT+GY+ PEY   G+ + + DVYSFGV++LE+++GKK +   +      GNLV
Sbjct:  347 ATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDST-MQSLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLV 567          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 4.004e-53
Identity = 106/217 (48.85%), Postives = 146/217 (67.28%), Query Frame = 3
Query:    9 LMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            L R +L  +  A++ F   NI+G GGFG VYK  L DG  VAVK+L + +T G   +F  E+E +    H+NL+ L G+C    E+LLVY YM NGS+   LR R  S   L W  R +IA G+ARGL++LH    P IIHRD+KA+NILL+EEFEA V DFGLA+L+   +THV+T + GT G+I PEY  +G+S+ + DV+ +G++LLEL+TG++
Sbjct:  287 LKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR 503          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.004e-53
Identity = 111/222 (50.00%), Postives = 145/222 (65.32%), Query Frame = 3
Query:    9 LMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF-----GEEKLLVYEYMVNGSLDLWLRNRTGSLEV-LGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            L++ +   I +ATNNF + NIIG GG+G V+K ALPDG  VA K+       G   F  E+E +  ++H NL+ L GYC+      G ++++V + + NGSL   L    G LE  L W  R +IA G ARGLA+LH+G  P IIHRDIKASNILL+E FEAKVADFGLA+      TH+ST +AGT GY+ PEY   G+ T + DVYSFGV+LLEL++ +K
Sbjct:  268 LVKFSFDEIKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFKRFKNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHL---FGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRK 486          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 8.920e-53
Identity = 109/214 (50.93%), Postives = 135/214 (63.08%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPT 662
            TL  I  ATNNF   N IG+GGFG VYK  L DG T+AVK+LS    QG+REF  E+  +  ++H NLV L G C  G+E LLVYEY+ N SL   L         L W  R K+  G A+GLA+LH      I+HRDIKA+N+LL+    AK++DFGLA+L     TH+ST IAGT GY+ PEY   G  T + DVYSFGV+ LE+V+GK  T
Sbjct:  656 TLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNT 869          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.920e-53
Identity = 110/214 (51.40%), Postives = 135/214 (63.08%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPT 662
            TL  I  ATNNF   N IG+GGFG VYK  L DG T+AVK+LS    QG+REF  E+  +  ++H NLV L G C  G+E LLVYEY+ N SL   L         L W  R KI  G A+GLA+LH      I+HRDIKA+N+LL+    AK++DFGLA+L     TH+ST IAGT GY+ PEY   G  T + DVYSFGV+ LE+V+GK  T
Sbjct:  658 TLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNT 871          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.920e-53
Identity = 108/218 (49.54%), Postives = 146/218 (66.97%), Query Frame = 3
Query:    3 QPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK 653
            Q ++R  L  I+ ATNNF   N +G GGFG+VYK  LP G+ +AVK+L +   QG  EF  E+  L +++H+NLV LLG+C+  +E++LVYE++ N SLD ++ +      VL WD RY I  G ARGL +LH      IIHRD+KASNILL+ E   KVADFG+ARL    ET   T  + GT+GY+ PEY   G+ +T+ DVYSFGV+LLE+++GK
Sbjct:  328 QSMLRFDLRMIVTATNNFSLENKLGQGGFGSVYKGILPSGQEIAVKRLRKGSGQGGMEFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDEE-KRRVLTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGK 544          
The following BLAST results are available for this feature:
BLAST of FC929138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK25_ARATH3.622e-5451.46Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
SERK2_ARATH8.068e-5449.77Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
Y5977_ARATH1.797e-5348.60Probable leucine-rich repeat receptor-like protein... [more]
CRK33_ARATH1.797e-5348.05Putative cysteine-rich receptor-like protein kinas... [more]
CRK4_ARATH3.066e-5347.75Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
SERK1_ARATH4.004e-5348.85Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
RKF3_ARATH4.004e-5350.00Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH8.920e-5350.93Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH8.920e-5351.40Probable LRR receptor-like serine/threonine-protei... [more]
CRK37_ARATH8.920e-5349.54Cysteine-rich receptor-like protein kinase 37 OS=A... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH3CE03RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CE03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929138 ID=FC929138; Name=FC929138; organism=Citrus clementina; type=EST; length=702bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAAAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CG
back to top