FC929138

Overview
NameFC929138
Unique NameFC929138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15034 contig Ccv1_Contig15034:1..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.682e-51
Identity = 106/212 (50.00%), Postives = 142/212 (66.98%), Query Frame = 3
Query:   42 ATNNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL-ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPE 671
            AT NF     +G+GGFG VYK  L   G+ VAVK+L +   QG+REF  E+  L  + H NLV L+GYC+ G+++LLVYE+M  GSL+  L +     E L W+ R KIA GAA+GL FLH    P +I+RD K+SNILL+E F  K++DFGLA+L  +  ++HVST + GT+GY  PEY  +G+ T + DVYSFGV+ LEL+TG+K    E
Sbjct:   82 ATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSE 293          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 1.682e-51
Identity = 105/211 (49.76%), Postives = 146/211 (69.19%), Query Frame = 3
Query:   33 ILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRN--RTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            I  AT++F ++N IG GGFG VYK  L DG  VAVK+LS++  QG  EF  E+  + K++H+NLV LLG+C  GEE++LVYEY+ N SLD +L +  + G L+   W +RYKI  G ARG+ +LH      IIHRD+KASNILL+ +   K+ADFG+AR+    +T  +T  I GT+GY+ PEY   G+ + + DVYSFGV++LE+++GKK
Sbjct:  330 IQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQLD---WTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKK 537          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 2.197e-51
Identity = 107/220 (48.64%), Postives = 140/220 (63.64%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPEFKD 680
            T   +  AT +F  +N +G+GGFG VYK  L DG+ VAVK LS    QG  +F AE+  +  V+H+NLV L G C  GE +LLVYEY+ NGSLD  L     +L  L W  RY+I  G ARGL +LH      I+HRD+KASNILL+ +   KV+DFGLA+L    +TH+ST +AGT GY+ PEY   G  T + DVY+FGV+ LELV+G+  +    +D
Sbjct:  682 TYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEK-TLH-LDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLED 899          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 2.197e-51
Identity = 104/215 (48.37%), Postives = 144/215 (66.98%), Query Frame = 3
Query:   15 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            R +L  +L AT  F K N++G G FG +YK  L D   VAVK+L++ +T+G   +F  E+E +    H+NL+ L G+C    E+LLVY YM NGS+   LR R      L W KR  IA G+ARGLA+LH      IIH D+KA+NILL+EEFEA V DFGLA+L++  ++HV+T + GT G+I PEY  +G+S+ + DV+ +GV+LLEL+TG+K
Sbjct:  262 RFSLRELLVATEKFSKRNVLGKGRFGILYKGRLADDTLVAVKRLNEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQK 476          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.197e-51
Identity = 105/219 (47.95%), Postives = 149/219 (68.04%), Query Frame = 3
Query:    3 QPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            Q ++R  L  I+ AT++F   N +G GGFGTVYK   P+G+ VAVK+L++   QG  EF  E+  L +++H+NLV LLG+C+ G+E++LVYE++ N SLD ++ +      +L W+ R++I  G ARGL +LH      IIHRD+KASNILL+ E   KVADFG ARL  + ET   T  IAGT GY+ PEY   G+ + + DVYSFGV+LLE+++G++
Sbjct:  331 QFMLRFDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPNGQEVAVKRLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDE-DKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGER 548          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 2.870e-51
Identity = 107/224 (47.77%), Postives = 146/224 (65.18%), Query Frame = 3
Query:   33 ILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVST-DIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPEFKDIEGGNLV 701
            I+ AT+ F   N +G GGFG VYK   P G  VAVK+LS+   QG +EF  E+  + K++H+NLV LLGYC  GEEK+LVYE++ N SLD +L + T   + L W +RYKI  G ARG+ +LH      IIHRD+KA NILL+ +   KVADFG+AR+    +T  +T  + GT+GY+ PEY   G+ + + DVYSFGV++LE+V+G K +  +  D    NLV
Sbjct:  337 IVAATDIFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTMQGQ-LDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQMDGSISNLV 559          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.748e-51
Identity = 107/215 (49.77%), Postives = 138/215 (64.19%), Query Frame = 3
Query:   21 TLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEV-LGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPT 662
            TL  I  AT+NF  T  IG+GGFG+VYK  L +GK +AVK+LS    QG+REF  E+  +  ++H NLV L G C  G + +LVYEY+ N  L   L  +  S  + L W  R KI  G A+GL FLH      I+HRDIKASN+LL+++  AK++DFGLA+L     TH+ST IAGT GY+ PEY   G  T + DVYSFGV+ LE+V+GK  T
Sbjct:  667 TLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNT 881          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.748e-51
Identity = 105/213 (49.30%), Postives = 144/213 (67.61%), Query Frame = 3
Query:   39 EATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEE-----KLLVYEYMVNGSLD--LWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            +ATNNF + N IG GGFG VYK  LPDG  +AVKK+ +++ QG  EF  E+E +  +KH+NLVPL G CS  ++     + LVY+YM NG+LD  L+ R  T  +  L W +R  I    A+GLA+LH+G  P I HRDIK +NILL+ +  A+VADFGLA+     E+H++T +AGT GY+ PEY   G+ T + DVYSFGV++LE++ G+K
Sbjct:  290 KATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIESEFQGDAEFRNEVEIISNLKHRNLVPLRG-CSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMP-LSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRK 500          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.895e-51
Identity = 109/230 (47.39%), Postives = 143/230 (62.17%), Query Frame = 3
Query:    6 PLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHRE-------FTAEMETLGKVKHQNLVPLLGYCSF--GEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGP 668
            P  R T+  ILEAT  F  + I+G G  GTVYKA +P GKT+AVKKL   +   +         F AE+ TLGK++H+N+V L  +C        LL+YEYM  GSL   L    G    + W  R+ IA GAA GLA+LHH   P IIHRDIK++NIL++E FEA V DFGLA++I    +   + +AG++GYI PEY  + + T + D+YSFGV+LLEL+TGK P  P
Sbjct:  803 PKERFTVKDILEATKGFHDSYIVGRGACGTVYKAVMPSGKTIAVKKLESNREGNNNNSNNTDNSFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHG--GKSHSMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQP 1030          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.895e-51
Identity = 106/219 (48.40%), Postives = 148/219 (67.58%), Query Frame = 3
Query:    3 QPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            Q ++R  L  +L AT+ F   N +G GGFGTVYK  L +G+ VAVK+L++   QG  EF  E+  L +++H+NLV LLG+C+ G+E++LVYE++ N SLD ++ +      +L W+ RY+I  G ARGL +LH      IIHRD+KASNILL+ E   KVADFG ARL  + ET   T  IAGT GY+ PEY   G+ + + DVYSFGV+LLE+++G++
Sbjct:  336 QFMLRFDLGMVLAATDEFSSENTLGQGGFGTVYKGTLLNGQEVAVKRLTKGSGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFD-DEKRSLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGER 553          
The following BLAST results are available for this feature:
BLAST of FC929138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PBS1_ARATH1.682e-5150.00Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
CRK10_ARATH1.682e-5149.76Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
Y5614_ARATH2.197e-5148.64Probable LRR receptor-like serine/threonine-protei... [more]
SERK5_ARATH2.197e-5148.37Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
CRK40_ARATH2.197e-5147.95Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK20_ARATH2.870e-5147.77Putative cysteine-rich receptor-like protein kinas... [more]
Y1765_ARATH3.748e-5149.77Probable LRR receptor-like serine/threonine-protei... [more]
Y1105_ARATH3.748e-5149.30Probable receptor-like protein kinase At1g11050 OS... [more]
Y2317_ARATH4.895e-5147.39Probable leucine-rich repeat receptor-like protein... [more]
CRK39_ARATH4.895e-5148.40Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CE03RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CE03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929138 ID=FC929138; Name=FC929138; organism=Citrus clementina; type=EST; length=702bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAAAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CG
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