FC929138

Overview
NameFC929138
Unique NameFC929138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15034 contig Ccv1_Contig15034:1..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: MET_CALJA (Hepatocyte growth factor receptor OS=Callithrix jacchus GN=MET PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18
Identity = 74/213 (34.74%), Postives = 111/213 (52.11%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAAL--PDGKTV--AVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPE 671
            +IG G FG VY   L   DGK +  AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1286          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: MET_ATEGE (Hepatocyte growth factor receptor OS=Ateles geoffroyi GN=MET PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18
Identity = 74/213 (34.74%), Postives = 111/213 (52.11%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAAL--PDGKTV--AVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPE 671
            +IG G FG VY   L   DGK +  AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1286          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: MET_AOTNA (Hepatocyte growth factor receptor OS=Aotus nancymaae GN=MET PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18
Identity = 74/213 (34.74%), Postives = 111/213 (52.11%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAAL--PDGKTV--AVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPE 671
            +IG G FG VY   L   DGK +  AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E+F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1083 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1286          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: M3K7_DROME (Mitogen-activated protein kinase kinase kinase 7 OS=Drosophila melanogaster GN=Tak1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18
Identity = 64/206 (31.07%), Postives = 108/206 (52.43%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL-NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPEFKDIE 686
            +G G +G V KA   D K VAVK+   +  Q  ++   E++ L +VKH N++ L G  S+ +   L+ E+   GSL  +L  +      L     +   C  A GLA+LH      +IHRD+K  N+LL N+    K+ DFG      A ++ + T+  G+  ++ PE  +  + T + D++S+ ++L E+++ K+P    FK I+
Sbjct:   25 VGHGSYGVVCKAVWRD-KLVAVKEFFASAEQ--KDIEKEVKQLSRVKHPNIIALHGISSYQQATYLIMEFAEGGSLHNFLHGKVKPAYSLAHAMSWARQC--AEGLAYLHAMTPKPLIHRDVKPLNLLLTNKGRNLKICDFGTV----ADKSTMMTNNRGSAAWMAPEVFEGSKYTEKCDIFSWAIVLWEVLSRKQP----FKGID 217          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: FYN_CHICK (Proto-oncogene tyrosine-protein kinase Fyn OS=Gallus gallus GN=FYN PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18
Identity = 67/197 (34.01%), Postives = 96/197 (48.73%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKKP 659
            +G G F  V++        VA+K L    T     F  E + + K+KH  LV L    S      +V EYM  GSL ++L++  G    L       +A   A G+A++      + IHRD++++NIL+      K+ADFGLARLI   E            +  PE    GR T + DV+SFG++L ELVT G+ P
Sbjct:  274 LGQGCFAEVWRGTWNGNTKVAIKTLKPG-TMSPESFLEEAQIMKKLKHDKLVQLYAVVS-RRPIYIVTEYMSKGSLLIFLKDGEG--RALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 463          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: EPHB1_HUMAN (Ephrin type-B receptor 1 OS=Homo sapiens GN=EPHB1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18
Identity = 67/208 (32.21%), Postives = 110/208 (52.88%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKKP 659
            +IG G FG VYK  L   GK    VA+K L    ++  R +F +E   +G+  H N++ L G  +     +++ E+M NG+LD +LR   G   V+   +   +  G A G+ +L      + +HRD+ A NIL+N     KV+DFGL+R +   +T   T  +   G IP     PE     + T+  DV+S+G+++ E+++ G++P
Sbjct:  624 VIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYLAE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQD-DTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERP 824          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: EPHB1_CHICK (Ephrin type-B receptor 1 (Fragment) OS=Gallus gallus GN=EPHB1 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18
Identity = 67/208 (32.21%), Postives = 110/208 (52.88%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKKP 659
            +IG G FG VYK  L   GK    VA+K L    ++  R +F +E   +G+  H N++ L G  +     +++ E+M NG+LD +LR   G   V+   +   +  G A G+ +L      + +HRD+ A NIL+N     KV+DFGL+R +   +T   T  +   G IP     PE     + T+  DV+S+G+++ E+++ G++P
Sbjct:  624 VIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYLAE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQD-DTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERP 824          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: YRK_CHICK (Proto-oncogene tyrosine-protein kinase Yrk OS=Gallus gallus GN=YRK PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18
Identity = 68/198 (34.34%), Postives = 101/198 (51.01%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKKP 659
            +G+G FG V+         VAVK L    T     F  E + + +++H  LV L  Y    EE + +V E+M  GSL  +L++  G    L   +   +A   A G+A++      + IHRD++A+NIL+ +    K+ADFGLARLI   E            +  PE    G+ T + DV+SFG++L ELVT G+ P
Sbjct:  276 LGNGQFGEVWMGTWNGTTKVAVKTLKPG-TMSPEAFLEEAQIMKRLRHDKLVQL--YAVVSEEPIYIVTEFMSQGSLLDFLKDGDG--RYLKLPQLVDMAAQIAAGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALFGKFTIKSDVWSFGILLTELVTKGRVP 465          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: TNI3K_RAT (Serine/threonine-protein kinase TNNI3K OS=Rattus norvegicus GN=Tnni3k PE=2 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18
Identity = 69/203 (33.99%), Postives = 105/203 (51.72%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHRE----FTAEMETLGKVKHQNLVPLLGYCSFGEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE-YGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            IIG G FG VYK    + K VA+K+  +A T   +     F  E+  L ++ H  +V  +G C     +  +V +Y+  GSL   L  +     +L    +  IA   A+G+ +LH   T  IIHRD+ + NILL E+  A VADFG +R + + +    T   G   ++ PE + Q  R T + DV+S+ + L EL+TG+ P
Sbjct:  468 IIGSGSFGKVYKGRCRN-KIVAIKRY-RANTYCSKSDVDMFCREVSILCQLNHPCVVQFVGACLDDPSQFAIVTQYISGGSLFSLLHEQK---RILDLQSKLIIAVDVAKGMEYLH-SLTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYSLCLWELLTGEIP 664          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: ROCO7_DICDI (Probable serine/threonine-protein kinase roco7 OS=Dictyostelium discoideum GN=roco7 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18
Identity = 66/205 (32.20%), Postives = 103/205 (50.24%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLS-----QAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN----EEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            +G G +  VY+  + +G  VA+K L+        T+ +REF  E    G+++H N V L+G         LV E +  G L  ++RN   + E   W    K+A   A+G+ FLH    P I+HRD+K++NILL     +   AKV DFGL+  I      V       + ++ PE    G+ T + D+YS+ ++L E++T   P
Sbjct: 1781 LGSGSYANVYRG-IWNGSEVAIKVLNFDDGHANTTEKYREFRNEAHITGELRHANTVSLMGVSL--SPFCLVTELLQYGDLAKFIRN---TAETFSWGTVLKLAIDVAKGMNFLH-SCKPMIVHRDLKSANILLGGSSMDNLVAKVGDFGLS--IKPIGKEVKGRKVWNWRWLAPECMGDGQYTEKIDIYSYAIVLWEIITRDLP 1976          
The following BLAST results are available for this feature:
BLAST of FC929138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MET_CALJA1.877e-1834.74Hepatocyte growth factor receptor OS=Callithrix ja... [more]
MET_ATEGE1.877e-1834.74Hepatocyte growth factor receptor OS=Ateles geoffr... [more]
MET_AOTNA1.877e-1834.74Hepatocyte growth factor receptor OS=Aotus nancyma... [more]
M3K7_DROME1.877e-1831.07Mitogen-activated protein kinase kinase kinase 7 O... [more]
FYN_CHICK1.877e-1834.01Proto-oncogene tyrosine-protein kinase Fyn OS=Gall... [more]
EPHB1_HUMAN1.877e-1832.21Ephrin type-B receptor 1 OS=Homo sapiens GN=EPHB1 ... [more]
EPHB1_CHICK1.877e-1832.21Ephrin type-B receptor 1 (Fragment) OS=Gallus gall... [more]
YRK_CHICK2.452e-1834.34Proto-oncogene tyrosine-protein kinase Yrk OS=Gall... [more]
TNI3K_RAT2.452e-1833.99Serine/threonine-protein kinase TNNI3K OS=Rattus n... [more]
ROCO7_DICDI2.452e-1832.20Probable serine/threonine-protein kinase roco7 OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CE03RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CE03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929138 ID=FC929138; Name=FC929138; organism=Citrus clementina; type=EST; length=702bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAAAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CG
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