FC929138

Overview
NameFC929138
Unique NameFC929138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15034 contig Ccv1_Contig15034:1..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: MET_OTOGA (Hepatocyte growth factor receptor OS=Otolemur garnettii GN=MET PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18
Identity = 74/213 (34.74%), Postives = 110/213 (51.64%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAAL--PDGKTV--AVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPE 671
            +IG G FG VY   L   DGK +  AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T +    +++G+  +       A+G+ +L    +   +HRD+ A N +L+E F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1084 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDENFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1287          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: IRAK2_MOUSE (Interleukin-1 receptor-associated kinase-like 2 OS=Mus musculus GN=Irak2 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18
Identity = 63/219 (28.77%), Postives = 112/219 (51.14%), Query Frame = 3
Query:   33 ILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQG----HREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLD--LWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVA-------DFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTG 650
            +++AT +F +++ I +G F  +Y+    +G   A KKL +          R   AEM+   +  H N++PLLG+C+  +   L+Y YM NGSL   LW +   G+ ++L W +R  I  G    +  LH   +  IIH ++K++N+LL++    K+A               +   TH+      +  Y+P  + + G+ T + D++S G++L E++TG
Sbjct:  201 VVQATEDFDQSHRISEGTFADIYQGQR-NGVAFAFKKLREVAGSSPGSMDRFLQAEMQLCLRCCHANVLPLLGFCTGRQFHSLIYPYMANGSLHDRLWAQ---GNSDMLPWPQRASICSGLLLAVEHLH---SLDIIHSNVKSANVLLDQHLNPKLAHPVAHPHPDNKKTKYTVMRTHL---FQASAAYLPEHFIRVGQLTKQVDIFSCGIVLAEVLTG 409          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: GDT4_DICDI (Probable serine/threonine-protein kinase gdt4 OS=Dictyostelium discoideum GN=gdt4 PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18
Identity = 65/201 (32.34%), Postives = 102/201 (50.75%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL-----NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            + +G FG VY +A+    +VAVK      ++   E   E   L K+KH N+V  +G  +F     +V +Y   GSL+ + RN+   L ++   +  +I+   +R  +FLH      IIHRD+K  N+L+     +    AK++DFG  R I+    H     AGT  Y+ PE  +    T   DVYSF ++  EL++G+ P
Sbjct: 1355 LSEGSFGVVY-SAIWRSSSVAVKLFKHHYSKD--EIDKETSILSKIKHPNIVSFIGSLNFLNTYGIVIDYHPRGSLNYYTRNQNIKLSMV---QNIRISLDISRACSFLHKN---GIIHRDLKPDNVLIVSFDPDSSICAKISDFGTCREING--KHELNSKAGTTRYMSPEILEGLPYTYSTDVYSFAILFFELLSGRVP 1544          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: EPHA3_RAT (Ephrin type-A receptor 3 OS=Rattus norvegicus GN=Epha3 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18
Identity = 70/217 (32.26%), Postives = 112/217 (51.61%), Query Frame = 3
Query:   36 LEATNNFCKTNIIGDGGFGTVY--KAALPDGK--TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTF--GYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKKP 659
            L+ATN      ++G G FG V   +  LP  K  +VA+K L    T+  R +F  E   +G+  H N++ L G  +  +  ++V EYM NGSLD +LR       V+   +   +  G A G+ +L   G+    +HRD+ A NIL+N     KV+DFGL+R++        T   G     +  PE     + T+  DV+S+G++L E+++ G++P
Sbjct:  617 LDATN-IAIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPVRWTSPEATAYRKFTSASDVWSYGIVLWEVMSYGERP 825          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: YES_CANFA (Proto-oncogene tyrosine-protein kinase Yes OS=Canis familiaris GN=YES1 PE=2 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 3.202e-18
Identity = 69/198 (34.85%), Postives = 99/198 (50.00%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKKP 659
            +G G FG V+         VA+K L    T     F  E + + K++H  LVPL  Y    EE + +V E+M  GSL  +L+   G  + L   +   +A   A G+A++      + IHRD++A+NIL+ E    K+ADFGLARLI   E            +  PE    GR T + DV+SFG++  EL T G+ P
Sbjct:  279 LGQGCFGEVWMGTWNGTTKVAIKTLKLG-TMMPEAFLQEAQIMKKLRHDKLVPL--YAVVSEEPIYIVTEFMSKGSLLDFLKEGDG--KYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGENLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILQTELTTKGRVP 468          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: PKNA2_BIFLO (Probable serine/threonine-protein kinase pknA2 OS=Bifidobacterium longum GN=pknA2 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.202e-18
Identity = 63/203 (31.03%), Postives = 102/203 (50.25%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQG-HRE-----FTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            I +GG  TVY+A     G+TVA+K +     +G HRE     F  E  +   + + ++V +     F     LV EY V+G   + LR+   +       +  ++      GLA  H      ++HRDIK  NIL+N+    ++ DFGLA+  S      +  + GT  Y+ PE  ++ ++T +GD+YS G++  E++TGK P
Sbjct:   20 IAEGGMATVYEAIDERLGRTVAIKVMHTQLAKGPHREQFVERFRREANSAASIANPHIVQVYDTGEFNGLDFLVMEY-VHG---VNLRHEMNAQGTFSVRETLRVVAETLDGLASAHRA---GVVHRDIKPENILINDRGHVQITDFGLAKAASQATLSSTGMLLGTAAYLAPEMIENNQATAQGDLYSVGIMAWEMLTGKVP 215          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: LYN_RAT (Tyrosine-protein kinase Lyn OS=Rattus norvegicus GN=Lyn PE=2 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 3.202e-18
Identity = 65/197 (32.99%), Postives = 99/197 (50.25%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKKP 659
            +G G FG V+     +   VAVK L    T   + F  E   +  ++H  LV L    +  E   ++ E+M  GSL  +L++  GS  +L   K    +   A G+A++      + IHRD++A+N+L++E    K+ADFGLAR+I   E            +  PE    G  T + DV+SFG++L E+VT GK P
Sbjct:  253 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSAQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGSKVLL--PKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 443          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: EPHB2_CHICK (Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2 PE=1 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 3.202e-18
Identity = 68/208 (32.69%), Postives = 109/208 (52.40%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKKP 659
            +IG G FG V    L   GK    VA+K L    T+  R +F +E   +G+  H N++ L G  +     +++ E+M NGSLD +LR   G   V+   +   +  G A G+ +L      + +HRD+ A NIL+N     KV+DFGL+R +   +T   T  +   G IP     PE  Q  + T+  DV+S+G+++ E+++ G++P
Sbjct:  644 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED-DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 844          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: ARKA_DICDI (Ankyrin repeat-containing protein kinase A OS=Dictyostelium discoideum GN=arkA PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.202e-18
Identity = 66/196 (33.67%), Postives = 93/196 (47.45%), Query Frame = 3
Query:   63 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHRE-FTAEMETLGKVKHQNLVPLLGYCSFGEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELV 644
            T  IG G  G V+K  +  G+ VA+K L  A  +  RE F  E   L  ++   +V L G     E K+ LV EY  NGS+   +R    S     W++ +        G+  LH   TP ++HRDIK  N L+N   + KVADFGL+R  +           GT  Y  PE  +      R D+YS G+++ E+V
Sbjct: 1115 TEKIGSGASGKVFKG-IYRGRVVAIKVLKSADDEMTREDFLKEFGVLASLESHTIVGLYGVVL--EPKICLVMEYCSNGSIYHSIRKNPPS-----WERFFSFVQQMLAGINALHQS-TPQVLHRDIKTLNFLVNHNNKVKVADFGLSRFNTESNQETLNKTRGTSVYCAPEVFEGKEYNERSDMYSMGIVMWEIV 1301          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: TNI3K_HUMAN (Serine/threonine-protein kinase TNNI3K OS=Homo sapiens GN=TNNI3K PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 67/203 (33.00%), Postives = 106/203 (52.22%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHRE----FTAEMETLGKVKHQNLVPLLGYCSFGEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE-YGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            IIG G FG VYK    + K VA+K+  +A T   +     F  E+  L ++ H  ++  +G C     +  +V +Y+  GSL   L  +     +L    +  IA   A+G+ +LH+  T  IIHRD+ + NILL E+  A VADFG +R + + +    T   G   ++ PE + Q  R T + DV+S+ + L E++TG+ P
Sbjct:  569 IIGSGSFGKVYKGRCRN-KIVAIKRY-RANTYCSKSDVDMFCREVSILCQLNHPCVIQFVGACLNDPSQFAIVTQYISGGSLFSLLHEQK---RILDLQSKLIIAVDVAKGMEYLHN-LTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYALCLWEILTGEIP 765          
The following BLAST results are available for this feature:
BLAST of FC929138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MET_OTOGA2.452e-1834.74Hepatocyte growth factor receptor OS=Otolemur garn... [more]
IRAK2_MOUSE2.452e-1828.77Interleukin-1 receptor-associated kinase-like 2 OS... [more]
GDT4_DICDI2.452e-1832.34Probable serine/threonine-protein kinase gdt4 OS=D... [more]
EPHA3_RAT2.452e-1832.26Ephrin type-A receptor 3 OS=Rattus norvegicus GN=E... [more]
YES_CANFA3.202e-1834.85Proto-oncogene tyrosine-protein kinase Yes OS=Cani... [more]
PKNA2_BIFLO3.202e-1831.03Probable serine/threonine-protein kinase pknA2 OS=... [more]
LYN_RAT3.202e-1832.99Tyrosine-protein kinase Lyn OS=Rattus norvegicus G... [more]
EPHB2_CHICK3.202e-1832.69Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2... [more]
ARKA_DICDI3.202e-1833.67Ankyrin repeat-containing protein kinase A OS=Dict... [more]
TNI3K_HUMAN4.182e-1833.00Serine/threonine-protein kinase TNNI3K OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CE03RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CE03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929138 ID=FC929138; Name=FC929138; organism=Citrus clementina; type=EST; length=702bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAAAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CG
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