FC929138

Overview
NameFC929138
Unique NameFC929138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: EPA4A_DANRE (Ephrin type-A receptor 4a (Fragment) OS=Danio rerio GN=epha4a PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18
Identity = 69/213 (32.39%), Postives = 111/213 (52.11%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALP-DGKT---VAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI--SACETHVSTDIAGTF----GYIP-----PEYGQSGRSTTRGDVYSFGVILLELVT-GKKP 659
            IG G FG V    L   GK    VA+K L    T +  R+F +E   +G+  H N++ L G  +  +  +++ EYM NGSLD +LR   G   V+   +   I  G A G+ +L        +HRD+ A NIL+N     KV+DFG++R++       + + +I GT+    G IP     PE     + T+  DV+S+G+++ E+++ G++P
Sbjct:    1 IGIGEFGEVCSGRLKMPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIRLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGILRGIASGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEEDPDAAYTTREITGTYQSQGGKIPIRWTAPEAITYRKFTSASDVWSYGIVMWEVMSYGERP 207          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CDC7_SCHPO (Cell division control protein 7 OS=Schizosaccharomyces pombe GN=cdc7 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18
Identity = 65/199 (32.66%), Postives = 103/199 (51.76%), Query Frame = 3
Query:   72 IGDGGFGTVYKAA-LPDGKTVAVKK--LSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            +G G FG VY+   + +G+TVAVKK  LS+           E++ L  + H N+V   G     +   ++ EY  NGSL    +N     E L     +++     +GL +LH+     +IHRDIK +NIL  ++   K+ADFG+A  I+A E H    + G+  ++ PE  +   +TT  D++S G  ++EL+ G  P
Sbjct:   15 LGKGAFGAVYRGLNIKNGETVAVKKVKLSKMLKSDLSVIKMEIDLLKNLDHPNIVKYRGSYQTNDSLCIILEYCENGSLRSICKNFGKIPENLVALYTFQVL----QGLLYLHN---QGVIHRDIKGANILTTKDGTIKLADFGVATKINALEDH---SVVGSPYWMAPEVIELVGATTASDIWSVGCTVIELLDGNPP 203          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: BRAF1_MOUSE (B-Raf proto-oncogene serine/threonine-protein kinase OS=Mus musculus GN=Braf PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18
Identity = 64/200 (32.00%), Postives = 102/200 (51.00%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE-THVSTDIAGTFGYIPPE---YGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            IG G FGTVYK        V +  ++    Q  + F  E+  L K +H N++  +GY S   +  +V ++    SL   L       E++   K   IA   A+G+ +LH      IIHRD+K++NI L+E+   K+ DFGLA + S    +H    ++G+  ++ PE          + + DVY+FG++L EL+TG+ P
Sbjct:  500 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 692          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: BRAF1_HUMAN (B-Raf proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=BRAF PE=1 SV=4)

HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18
Identity = 64/200 (32.00%), Postives = 102/200 (51.00%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE-THVSTDIAGTFGYIPPE---YGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            IG G FGTVYK        V +  ++    Q  + F  E+  L K +H N++  +GY S   +  +V ++    SL   L       E++   K   IA   A+G+ +LH      IIHRD+K++NI L+E+   K+ DFGLA + S    +H    ++G+  ++ PE          + + DVY+FG++L EL+TG+ P
Sbjct:  463 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 655          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: BRAF1_COTJA (B-Raf proto-oncogene serine/threonine-protein kinase OS=Coturnix coturnix japonica GN=BRAF PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18
Identity = 64/200 (32.00%), Postives = 102/200 (51.00%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE-THVSTDIAGTFGYIPPE---YGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            IG G FGTVYK        V +  ++    Q  + F  E+  L K +H N++  +GY S   +  +V ++    SL   L       E++   K   IA   A+G+ +LH      IIHRD+K++NI L+E+   K+ DFGLA + S    +H    ++G+  ++ PE          + + DVY+FG++L EL+TG+ P
Sbjct:  503 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 695          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: BRAF1_CHICK (B-Raf proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=BRAF PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18
Identity = 64/200 (32.00%), Postives = 102/200 (51.00%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE-THVSTDIAGTFGYIPPE---YGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            IG G FGTVYK        V +  ++    Q  + F  E+  L K +H N++  +GY S   +  +V ++    SL   L       E++   K   IA   A+G+ +LH      IIHRD+K++NI L+E+   K+ DFGLA + S    +H    ++G+  ++ PE          + + DVY+FG++L EL+TG+ P
Sbjct:  503 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 695          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: ABL_DROME (Tyrosine-protein kinase Abl OS=Drosophila melanogaster GN=Abl PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18
Identity = 67/203 (33.00%), Postives = 105/203 (51.72%), Query Frame = 3
Query:   57 CKTNI-----IGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT 647
            C+T+I     +G G +G VY+A     G TVAVK L +  T   ++F  E   + ++KH NLV L+G C+      ++ E+M +G+L  +L  R+   E L       +A   A G+++L    + + IHRD+ A N L+ +    KVADFGLARL+                +  PE     + +T+ DV++FGV+L E+ T
Sbjct:  367 CRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKE-DTMALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFL--RSAGRETLDAVALLYMATQIASGMSYLE---SRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIAT 563          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: TNI3K_MOUSE (Serine/threonine-protein kinase TNNI3K OS=Mus musculus GN=Tnni3k PE=2 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17
Identity = 68/203 (33.50%), Postives = 104/203 (51.23%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHRE----FTAEMETLGKVKHQNLVPLLGYCSFGEEKL-LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPE-YGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            IIG G FG VYK    + K VA+K+  +A T   +     F  E+  L ++ H  +V  +G C     +  +V +Y+  GSL   L  +     +L    +  IA   A+G+ +LH   T  IIHRD+ + NILL E+  A VADFG +R + + +    T   G   ++ PE + Q  R T + DV+S+ + L EL+ G+ P
Sbjct:  467 IIGSGSFGKVYKGRCRN-KIVAIKRY-RANTYCSKSDVDMFCREVSILCQLNHPCVVQFVGACLDDPSQFAIVTQYISGGSLFSLLHEQK---RILDLQSKLIIAVDVAKGMEYLH-SLTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYALCLWELLIGEIP 663          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: SPKA_SYNY3 (Serine/threonine-protein kinase A OS=Synechocystis sp. (strain PCC 6803) GN=spkA PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17
Identity = 70/230 (30.43%), Postives = 107/230 (46.52%), Query Frame = 3
Query:   48 NNFCKTNIIGDGGFGTVYKAA--LPDGKTVAVKKLSQAKTQGHREFTAEME-TLGKVKHQNLVPLLGYCSFG----EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH-----IIHRDIKASNILLNEEFE----AKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPEFKDIEG 689
            N +    ++G G  G VY+A   L  G TVAVK LSQA      +   E E T+  +  +  + ++    +G    E    V EY+   ++   ++ R   +E     +  KIA     GL   H G         ++HRDIK SN+LL E+       K+ DFG+A+L+ A E   +    GT  Y  PE  +     +R D+YS GV++ E++TG+ P  P+     G
Sbjct:   13 NRYQLVELVGSGAMGQVYRAEDKLLGGVTVAVKFLSQALLNPRMKERFEREATISALLGEKSIHIVRVRDYGLDEKEIPFYVMEYLQGENISDVIKYRPLKVE-----RFLKIARQICFGLDCAHKGIIYQGEACPVVHRDIKPSNVLLVEDPALGELVKILDFGIAKLVQAAEESKTQAFMGTLAYCSPEQMEGKELDSRSDIYSLGVMMYEMLTGEMPLFPDNSSFGG 237          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: MLTK_MOUSE (Mitogen-activated protein kinase kinase kinase MLT OS=Mus musculus GN=Mltk PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17
Identity = 69/210 (32.86%), Postives = 108/210 (51.43%), Query Frame = 3
Query:   75 GDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSL-DLWLRNRTGSLE---VLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPEFKDIEG 689
            G G FG+VY+A  +   K VAVKKL + +         E E L  + H+N++   G         +V EY   GSL D    NR+  ++   ++ W      A   A+G+ +LH      +IHRD+K+ N+++  +   K+ DFG +R  +   TH+S  + GTF ++ PE  QS   +   D YS+GV+L E++T + P    FK +EG
Sbjct:   23 GGGSFGSVYRAKWISQDKEVAVKKLLKIEK--------EAEILSVLSHRNIIQFYGVILEPPNYGIVTEYASLGSLYDYINSNRSEEMDMEHIMTW------ATDVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGASRFHNH-TTHMS--LVGTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVP----FKGLEG 211          
The following BLAST results are available for this feature:
BLAST of FC929138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EPA4A_DANRE9.317e-1832.39Ephrin type-A receptor 4a (Fragment) OS=Danio reri... [more]
CDC7_SCHPO9.317e-1832.66Cell division control protein 7 OS=Schizosaccharom... [more]
BRAF1_MOUSE9.317e-1832.00B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_HUMAN9.317e-1832.00B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_COTJA9.317e-1832.00B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_CHICK9.317e-1832.00B-Raf proto-oncogene serine/threonine-protein kina... [more]
ABL_DROME9.317e-1833.00Tyrosine-protein kinase Abl OS=Drosophila melanoga... [more]
TNI3K_MOUSE1.217e-1733.50Serine/threonine-protein kinase TNNI3K OS=Mus musc... [more]
SPKA_SYNY31.217e-1730.43Serine/threonine-protein kinase A OS=Synechocystis... [more]
MLTK_MOUSE1.217e-1732.86Mitogen-activated protein kinase kinase kinase MLT... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CE03RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CE03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929138 ID=FC929138; Name=FC929138; organism=Citrus clementina; type=EST; length=702bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAAAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CG
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