FC929138

Overview
NameFC929138
Unique NameFC929138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15034 contig Ccv1_Contig15034:1..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: EPHA5_CHICK (Ephrin type-A receptor 5 OS=Gallus gallus GN=EPHA5 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.589e-17
Identity = 66/206 (32.04%), Postives = 106/206 (51.46%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG--TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKKP 659
            +IG G FG V    L   GK    VA+K L    T+  R +F  E   +G+  H N++ L G  +  +  ++V EYM NGSLD +L+   G   V+   +   +  G A G+ +L   G+    +HRD+ A NIL+N     KV+DFGL+R++        T   G     +  PE     + T+  DV+S+G+++ E+++ G++P
Sbjct:  656 VIGAGEFGEVCSGRLKLQGKREFPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVMSYGERP 854          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y5458_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45840 OS=Arabidopsis thaliana GN=At5g45840 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.076e-17
Identity = 67/208 (32.21%), Postives = 107/208 (51.44%), Query Frame = 3
Query:   63 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEME--------TLGKVKHQNLVPLLGYCSFGE--EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA-RLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK 653
            +NII      TVYK  L  G  +AV   +  +T   RE+T  ME        T+ +V H+N + L+GYC   E   +++V+EY  NG+L   L ++   +E L W+ R +I  G A  L ++H    P I H  + +S I L +++ AKV +   + +  S     +S D+  +   +PPE           +VYSFGV++LE+++GK
Sbjct:  404 SNIIEAFDGYTVYKGTLSSGVEIAVASTAILET---REWTRAMEMTYRRRIDTMSRVNHKNFINLIGYCEEDEPFNRMMVFEYAPNGTLFEHLHDK--EMEHLDWNARTRIIMGTAYCLQYMHE-LNPPISHTKLVSSAIYLTDDYAAKVGEVPFSGQTGSKPRKPMSGDLDQSLLPLPPE--------PETNVYSFGVLMLEIISGK 597          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: FRK_MOUSE (Tyrosine-protein kinase FRK OS=Mus musculus GN=Frk PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.076e-17
Identity = 62/200 (31.00%), Postives = 104/200 (52.00%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV---STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKKP 659
            +G G FG V++    +   VAVK L       + +F  E + +  ++H  L+ L   C+  +   ++ E M +GSL  +L+N  GS   L   ++  +A   A G+A+L    + + IHRD+ A N+L+ E    KVADFGLAR+       +     +I     +  PE  ++ + + + DV+SFG++L E++T GK P
Sbjct:  247 LGSGQFGEVWEGLWNNTTPVAVKTLKPGSMDPN-DFLREAQIMKSLRHPKLIQLYAVCTLEDPIYIITELMRHGSLQEYLQNDGGSKIHL--IQQVDMAAQVASGMAYLE---SQNYIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDIYESKHEIKLPVKWTAPEAIRTNKFSIKSDVWSFGILLYEIITYGKMP 440          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: EPHA5_HUMAN (Ephrin type-A receptor 5 OS=Homo sapiens GN=EPHA5 PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.076e-17
Identity = 66/206 (32.04%), Postives = 106/206 (51.46%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALP-DGKT---VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG--TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKKP 659
            +IG G FG V    L   GK    VA+K L    T+  R +F  E   +G+  H N++ L G  +  +  ++V EYM NGSLD +L+   G   V+   +   +  G + G+ +L   G+    +HRD+ A NIL+N     KV+DFGL+R++        T   G     +  PE     + T+  DV+S+G+++ E+V+ G++P
Sbjct:  680 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI---QLVGMLRGISAGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 878          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: EPHA3_CHICK (Ephrin type-A receptor 3 OS=Gallus gallus GN=EPHA3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.076e-17
Identity = 66/213 (30.99%), Postives = 108/213 (50.70%), Query Frame = 3
Query:   48 NNFCKTNIIGDGGFGTVY--KAALPDGK--TVAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHH-GFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG--TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKKP 659
            +N     ++G G FG V   +  LP  K  +VA+K L    T+  R +F  E   +G+  H N++ L G  +  +  ++V EYM NGSLD +LR       V+   +   +  G A G+ +L   G+    +HRD+ A NIL+N     KV+DFGL+R++        T   G     +  PE     + T+  D +S+G++L E+++ G++P
Sbjct:  619 SNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKAGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDAWSYGIVLWEVMSYGERP 824          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: SRK4_SPOLA (Tyrosine-protein kinase isoform SRK4 OS=Spongilla lacustris GN=SRK1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17
Identity = 63/192 (32.81%), Postives = 93/192 (48.44%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT 647
            +G G FG V++       +VAVK L    T    EF  E   + +++H  L+ L   C+  E   +V E M +GSL  +LR    SL++        +    A G+++L      + IHRD+ A NIL+ E    KVADFGLAR+I                +  PE     R T + DV+SFG++L E++T
Sbjct:  246 LGAGQFGEVWEGLWNGTTSVAVKTLKPG-TMSIEEFLEEASIMKQLRHPKLIQLYAVCTKEEPIYIVTELMKHGSLLEYLRGDGRSLKL---PDLVDMCSQVASGMSYLEQ---QNYIHRDLAARNILVGEHKICKVADFGLARVIDEEIYEAKLGAKFPIKWTAPEAAMYSRFTIKSDVWSFGIVLYEVIT 430          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: MET_ECHTE (Hepatocyte growth factor receptor OS=Echinops telfairi GN=MET PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17
Identity = 72/213 (33.80%), Postives = 107/213 (50.23%), Query Frame = 3
Query:   69 IIGDGGFGTVYKAALPDGKT----VAVKKLSQAKTQGH-REFTAEMETLGKVKHQNLVPLLGYCSFGE-EKLLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPE 671
            +IG G FG VY   L D        AVK L++    G   +F  E   +    H N++ LLG C   E   L+V  YM +G L  ++RN T S    +++G+  +       A+G+ +L    +   +HRD+ A N +L+ +F  KVADFGLAR +   E    H  T       ++  E  Q+ + TT+ DV+SFGV+L EL+T   P  P+
Sbjct: 1082 VIGRGHFGCVYHGTLLDNDDRKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHSPTVKDLIGFGLQ------VAKGMKYLA---SKKFVHRDLAARNCMLDGKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 1285          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: EPHA3_DANRE (Ephrin type-A receptor 3 OS=Danio rerio GN=epha3 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17
Identity = 63/205 (30.73%), Postives = 107/205 (52.20%), Query Frame = 3
Query:   69 IIGDGGFGTVY--KAALPDGKT--VAVKKLSQAKTQGHR-EFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAG--TFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKKP 659
            +IG G FG V   +  LP  +   VA+K L    ++  R +F +E   +G+  H N++ L G  +  +  ++V EYM NGSLD +L+   G   V+   +   +  G A G+ +L      + +HRD+ A NIL+N     KV+DFGL+R++        T   G     +  PE     + T+  DV+S+G+++ E+++ G++P
Sbjct:  631 VIGAGEFGEVCSGRLRLPSKREIQVAIKSLKAGYSEHQRRDFLSEASIMGQFDHPNIIRLEGVVTRCKPVMIVTEYMENGSLDTFLKKHDGQFTVI---QLLGMLRGIAAGMQYLSE---MNYVHRDLAARNILVNRNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAITYRKFTSASDVWSYGIVMWEVISYGERP 829          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y0146_DICDI (Probable serine/threonine-protein kinase DDB_G0270146 OS=Dictyostelium discoideum GN=DDB_G0270146 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17
Identity = 66/199 (33.17%), Postives = 99/199 (49.75%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            IG G F TV+K      G  VA+K+  ++K   + H   + E + L ++ H+N+V +LG         +  EYM NGSL   L N     E L  +    +     +GL +LH      +IHRDIKA+NIL+N+  EAK++DFG A  I   E+     + GT  ++ PE  +        D++S G  ++EL T   P
Sbjct:   83 IGKGAFATVFKGLNTLSGDFVAIKRFEKSKISNEQHSSVSTEFDILQRLNHENIVRILGREENENYIYIFLEYMENGSLSTILNNFGTFPESLICNYVENVL----KGLVYLHQ---EGVIHRDIKAANILINKAGEAKLSDFGTAGEIIK-ESDKRYSVVGTPYWMAPEVIEISGHCQVSDIWSLGCTIIELFTSYPP 273          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: TIE2_HUMAN (Angiopoietin-1 receptor OS=Homo sapiens GN=TEK PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17
Identity = 72/216 (33.33%), Postives = 105/216 (48.61%), Query Frame = 3
Query:   66 NIIGDGGFGTVYKAALP-DGKTV--AVKKLSQ-AKTQGHREFTAEMETLGKVKHQ-NLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNR------------TGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP-----EYGQSGRSTTRGDVYSFGVILLELVT 647
            ++IG+G FG V KA +  DG  +  A+K++ + A    HR+F  E+E L K+ H  N++ LLG C       L  EY  +G+L  +LR                +   L   +    A   ARG+ +L        IHRD+ A NIL+ E + AK+ADFGL+R     E +V      T G +P      E       TT  DV+S+GV+L E+V+
Sbjct:  828 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK----TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 1033          
The following BLAST results are available for this feature:
BLAST of FC929138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EPHA5_CHICK1.589e-1732.04Ephrin type-A receptor 5 OS=Gallus gallus GN=EPHA5... [more]
Y5458_ARATH2.076e-1732.21Probable LRR receptor-like serine/threonine-protei... [more]
FRK_MOUSE2.076e-1731.00Tyrosine-protein kinase FRK OS=Mus musculus GN=Frk... [more]
EPHA5_HUMAN2.076e-1732.04Ephrin type-A receptor 5 OS=Homo sapiens GN=EPHA5 ... [more]
EPHA3_CHICK2.076e-1730.99Ephrin type-A receptor 3 OS=Gallus gallus GN=EPHA3... [more]
SRK4_SPOLA2.711e-1732.81Tyrosine-protein kinase isoform SRK4 OS=Spongilla ... [more]
MET_ECHTE2.711e-1733.80Hepatocyte growth factor receptor OS=Echinops telf... [more]
EPHA3_DANRE2.711e-1730.73Ephrin type-A receptor 3 OS=Danio rerio GN=epha3 P... [more]
Y0146_DICDI3.540e-1733.17Probable serine/threonine-protein kinase DDB_G0270... [more]
TIE2_HUMAN3.540e-1733.33Angiopoietin-1 receptor OS=Homo sapiens GN=TEK PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CE03RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CE03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929138 ID=FC929138; Name=FC929138; organism=Citrus clementina; type=EST; length=702bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAAAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CG
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