FC929138

Overview
NameFC929138
Unique NameFC929138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15034 contig Ccv1_Contig15034:1..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: TIE2_BOVIN (Angiopoietin-1 receptor OS=Bos taurus GN=TEK PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17
Identity = 72/216 (33.33%), Postives = 105/216 (48.61%), Query Frame = 3
Query:   66 NIIGDGGFGTVYKAALP-DGKTV--AVKKLSQ-AKTQGHREFTAEMETLGKVKHQ-NLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNR------------TGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP-----EYGQSGRSTTRGDVYSFGVILLELVT 647
            ++IG+G FG V KA +  DG  +  A+K++ + A    HR+F  E+E L K+ H  N++ LLG C       L  EY  +G+L  +LR                +   L   +    A   ARG+ +L        IHRD+ A NIL+ E + AK+ADFGL+R     E +V      T G +P      E       TT  DV+S+GV+L E+V+
Sbjct:  829 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK----TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 1034          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: SRMS_HUMAN (Tyrosine-protein kinase Srms OS=Homo sapiens GN=SRMS PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17
Identity = 60/192 (31.25%), Postives = 95/192 (49.48%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT 647
            +G+G FG V++        VA+K +  A  +   +   E++TL  ++H+ L+ L   CS GE   +V E M  G+L  +L    G    L        AC  A G+++L       ++HRD+ A N+L+++    KVADFGLARL+       S+       +  PE       + + DV+SFGV+L E+ T
Sbjct:  236 LGEGYFGEVWEGLWLGSLPVAIKVIKSANMK-LTDLAKEIQTLKGLRHERLIRLHAVCSGGEPVYIVTELMRKGNLQAFLGTPEG--RALRLPPLLGFACQVAEGMSYLEE---QRVVHRDLAARNVLVDDGLACKVADFGLARLLKDDIYSPSSSSKIPVKWTAPEAANYRVFSQKSDVWSFGVLLHEVFT 421          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: DST2_DICDI (Serine/threonine-protein kinase dst2 OS=Dictyostelium discoideum GN=dst2 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17
Identity = 60/202 (29.70%), Postives = 101/202 (50.00%), Query Frame = 3
Query:   72 IGDGGFGTVYKAA-LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAA-RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRS----TTRGDVYSFGVILLELVTGKKP 659
            I +G FGTVYK   LP G  +AVK ++  + +   +   E++ L +  H N+V   G    G+E  +  E    GS+    +     L     + +    C    +GL +LHH    ++IHRD+K +NILL E  + K+ADFG++ L+   ++       GT  ++ PE  ++  +     T+ D++S G+ L+EL   + P
Sbjct:   26 IAEGSFGTVYKGKHLPTGNIMAVKIIALDEDETFEDLVVEIDILNRCNHNNIVKYYGSWVKGDELFIAMECCGGGSITEIYQELNIPLN----ESQIAYVCRETLKGLEYLHH---TNVIHRDLKGANILLTESGDVKLADFGVSGLLD--KSSKRNTFIGTPYWMAPEVIENRSNPVPYDTKADIWSLGITLIELAEAEPP 218          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: DLK1_CAEBR (Mitogen-activated protein kinase kinase kinase dlk-1 OS=Caenorhabditis briggsae GN=dlk-1 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17
Identity = 62/196 (31.63%), Postives = 100/196 (51.02%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            +G G  G V+     + +TVAVKK++Q K         E++ L  ++H+N++  LG CS      +V EY   G L   LR +      +  D   +IA     G+ +LH      +IHRD+K+ NIL++ E   K+ DFG + L    ++ + +   GT  ++ PE  +      + DVYSFGV+L E++T + P
Sbjct:   68 LGSGSQGAVFHGQY-ENRTVAVKKVNQLKE-------TEIKHLRHLRHKNIIEFLGVCSKSPCYCIVMEYCPKGQLCTVLRQKNLITRQMFSDWVKEIA----DGMHYLHQN---KVIHRDLKSPNILISAEDSIKICDFGTSHLQKKNDSTMMS-FCGTVSWMAPEMIKKEPCNEKVDVYSFGVVLWEMLTRETP 247          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y9847_DICDI (Probable serine/threonine-protein kinase DDB_G0267686 OS=Dictyostelium discoideum GN=DDB_G0267686 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17
Identity = 70/214 (32.71%), Postives = 113/214 (52.80%), Query Frame = 3
Query:   66 NIIGDGGFGTVYKAALPDGKTVAVKKL-SQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTG------KKPTGPEFKDIE 686
            N +G+G    VY+A   + + VAVK L S+ ++Q   +F  E+E +  ++  ++V   G      +  ++ EY  N +L   +  +        WD  +K A    RG+  LH  + P I+HRD+K+ N+L+++ +  KVADFGL+R  +A ++  +    GTF Y  PE    G  TT+GD++S G+IL EL         +KP   EFK I+
Sbjct: 1953 NKLGEGTSAKVYRATWRN-QEVAVKVLRSEPESQKLLDFLKELEIMSSLRSPHVVYFYGMV-LDPKICMIMEYCSNQTLYHLMHLQMN----FTWDWVFKFAIEMVRGVNCLH-SWKPVIVHRDLKSLNLLVSDNWTIKVADFGLSRFATA-KSASNRTTRGTFAYCAPEVFY-GIHTTKGDIFSIGIILWELAVRCIKSKYEKPFS-EFKHIQ 2156          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y8901_DICDI (Probable serine/threonine-protein kinase DDB_G0278901 OS=Dictyostelium discoideum GN=DDB_G0278901 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17
Identity = 64/214 (29.91%), Postives = 104/214 (48.60%), Query Frame = 3
Query:   39 EATNNFCKTNIIGDGGFGTVYKAALPDG------KTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            E+  ++   +IIG GGFG VYK            K + + K  + +++      AE+  L  + H N+V    +        +V E++ NGSL+  ++      E L      ++      GL +LH      +IHRDIKA+N+L++ +   K+ADFG+A  +S   +    D  AGT  ++ PE  Q    +T  DV+S G  ++EL+TG  P
Sbjct:   17 ESCGDYLLIDIIGKGGFGVVYKGLHKTKGYFSAIKKIKIMKKKKLQSESQISLMAEINLLKVLSHHNIVRYYEHIPSSSHSYIVMEFIENGSLEKIIKRHGLLPESLVTVYIAQVL----NGLEYLHR---QGVIHRDIKAANLLISTDGSIKLADFGVATKVSDLSSDNPDDTFAGTPYWMAPEVIQMQGISTACDVWSLGCTIIELLTGTPP 223          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: TXK_MOUSE (Tyrosine-protein kinase TXK OS=Mus musculus GN=Txk PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17
Identity = 62/197 (31.47%), Postives = 97/197 (49.24%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKKP 659
            IG G FG V+         VA+K +++  +    +F  E + + K+ H  LV L G C   +   +V E+M NG L  +LR R G L+        +  C    G+A+L        IHRD+ A N L++     K++DFG+AR +   E   S+       + PPE     + +++ DV+SFGV++ E+ T GK P
Sbjct:  277 IGSGQFGVVHLGEWRAHIPVAIKAINEG-SMSEEDFIEEAKVMMKLSHSRLVQLYGVCIQQKPLYIVTEFMENGCLLDYLRERKGQLQKALLLSMCQDIC---EGMAYLERSC---YIHRDLAARNCLVSSACVVKISDFGMARYVLDDEYISSSGAKFPVKWCPPEVFHFNKYSSKSDVWSFGVLMWEVFTEGKMP 466          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: TIE2_MOUSE (Angiopoietin-1 receptor OS=Mus musculus GN=Tek PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17
Identity = 72/216 (33.33%), Postives = 105/216 (48.61%), Query Frame = 3
Query:   66 NIIGDGGFGTVYKAALP-DGKTV--AVKKLSQ-AKTQGHREFTAEMETLGKVKHQ-NLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNR------------TGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPP-----EYGQSGRSTTRGDVYSFGVILLELVT 647
            ++IG+G FG V KA +  DG  +  A+K++ + A    HR+F  E+E L K+ H  N++ LLG C       L  EY  +G+L  +LR                +   L   +    A   ARG+ +L        IHRD+ A NIL+ E + AK+ADFGL+R     E +V      T G +P      E       TT  DV+S+GV+L E+V+
Sbjct:  826 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYIAKIADFGLSR---GQEVYVKK----TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 1031          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: HCK_HUMAN (Tyrosine-protein kinase HCK OS=Homo sapiens GN=HCK PE=1 SV=5)

HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17
Identity = 63/192 (32.81%), Postives = 96/192 (50.00%), Query Frame = 3
Query:   72 IGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT 647
            +G G FG V+ A       VAVK +    +     F AE   +  ++H  LV L    +  E   ++ E+M  GSL  +L++  GS + L   K    +   A G+AF+      + IHRD++A+NIL++     K+ADFGLAR+I   E            +  PE    G  T + DV+SFG++L+E+VT
Sbjct:  268 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 452          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: ABL1_CAEEL (Tyrosine-protein kinase abl-1 OS=Caenorhabditis elegans GN=abl-1 PE=1 SV=4)

HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17
Identity = 70/211 (33.18%), Postives = 104/211 (49.29%), Query Frame = 3
Query:   66 NIIGDGGFGTVYKAALPDGK-TVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKKP-TGPEFKDIEG 689
            N +G G +G VY+        T+AVK L +     H EF AE   +  + H+NLV LLG C+      ++ E+M NG+L  +LR    SL  L      ++A   A G+++L      H IHRD+ A N L++E    K+ADFGLAR +                +  PE       +++ DV++FGV+L E+ T G  P  G E  ++ G
Sbjct:  315 NKLGGGQYGDVYEGYWKRHDCTIAVKALKEDAMPLH-EFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIITEFMCNGNLLEYLRRTDKSL--LPPIILVQMASQIASGMSYLE---ARHFIHRDLAARNCLVSEHNIVKIADFGLARFMKEDTYTAHAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYG 519          
The following BLAST results are available for this feature:
BLAST of FC929138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TIE2_BOVIN3.540e-1733.33Angiopoietin-1 receptor OS=Bos taurus GN=TEK PE=2 ... [more]
SRMS_HUMAN3.540e-1731.25Tyrosine-protein kinase Srms OS=Homo sapiens GN=SR... [more]
DST2_DICDI3.540e-1729.70Serine/threonine-protein kinase dst2 OS=Dictyostel... [more]
DLK1_CAEBR3.540e-1731.63Mitogen-activated protein kinase kinase kinase dlk... [more]
Y9847_DICDI4.624e-1732.71Probable serine/threonine-protein kinase DDB_G0267... [more]
Y8901_DICDI4.624e-1729.91Probable serine/threonine-protein kinase DDB_G0278... [more]
TXK_MOUSE4.624e-1731.47Tyrosine-protein kinase TXK OS=Mus musculus GN=Txk... [more]
TIE2_MOUSE4.624e-1733.33Angiopoietin-1 receptor OS=Mus musculus GN=Tek PE=... [more]
HCK_HUMAN4.624e-1732.81Tyrosine-protein kinase HCK OS=Homo sapiens GN=HCK... [more]
ABL1_CAEEL4.624e-1733.18Tyrosine-protein kinase abl-1 OS=Caenorhabditis el... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CE03RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CE03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929138 ID=FC929138; Name=FC929138; organism=Citrus clementina; type=EST; length=702bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAAAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CG
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