FC929138

Overview
NameFC929138
Unique NameFC929138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15034 contig Ccv1_Contig15034:1..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.144e-50
Identity = 106/218 (48.62%), Postives = 143/218 (65.60%), Query Frame = 3
Query:   12 MRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLE--VLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            ++  +  I  AT+NF  +N IG GGFG VYK  L +G  VAVK+LS+   QG  EF  E+  + K++H+NLV LLG+   GEEK+LV+E++ N SLD +L   T   +   L W +RY I  G  RGL +LH      IIHRDIKASNILL+ +   K+ADFG+AR     +T  ST  + GTFGY+PPEY   G+ +T+ DVYSFGV++LE+V+G+K
Sbjct:  332 LQFDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGRK 549          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.144e-50
Identity = 105/214 (49.07%), Postives = 138/214 (64.49%), Query Frame = 3
Query:   39 EATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPEFKD 680
            +AT +F   N +G GGFGTVYK  LPDG+ +AVK+L         +F  E+  +  V+H+NLV LLG    G E LLVYEY+ N SLD ++ +     + L W +RY I  G A GL +LH   +  IIHRDIKASNILL+ + +AK+ADFGLAR     ++H+ST IAGT GY+ PEY   G+ T   DVYSFGV++LE+VTGK+ T  +  D
Sbjct:  320 KATGSFDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRG-KTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSD 532          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.412e-50
Identity = 105/224 (46.88%), Postives = 152/224 (67.86%), Query Frame = 3
Query:   33 ILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKK-LSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEE--KLLVYEYMVNGSLDLWLRNRTGSLE----VLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA-CETHV--STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPEF 674
            I+EAT+N  +  +IG GG G VYKA L +G+TVAVKK L +     ++ F+ E++TLG+++H++LV L+GYCS   E   LL+YEYM NGS+  WL      LE    +L W+ R +IA G A+G+ +LHH   P I+HRDIK+SN+LL+   EA + DFGLA++++  C+T+   +T  A ++GYI PEY  S ++T + DVYS G++L+E+VTGK PT   F
Sbjct:  944 IMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKILWKDDLMSNKSFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVF 1167          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.412e-50
Identity = 109/233 (46.78%), Postives = 150/233 (64.38%), Query Frame = 3
Query:   12 MRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTD-IAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPEFKDIEG--GNLV 701
            +R     I  AT+NF K+N +G GGFG VYK   P+G  VA K+LS+   QG  EF  E+  + +++H+NLV LLG+   GEEK+LVYE++ N SLD +L +    ++ L W +R+ I  G  RG+ +LH      IIHRD+KASNILL+ E   K+ADFGLAR     +T  +T  + GTFGY+PPEY  +G+ +T+ DVYSFGV++LE++ GKK     F  I+G   NLV
Sbjct:  349 LRFDFRAIKAATSNFHKSNKLGHGGFGAVYKGMFPNGTEVAAKRLSKPSDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLFDPIKRVQ-LDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEANTGRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGGKK--NSSFHQIDGSVSNLV 578          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 7.068e-50
Identity = 106/214 (49.53%), Postives = 144/214 (67.29%), Query Frame = 3
Query:   15 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA-CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK 653
            ++T   +L+ TNNF    ++G GGFGTVY   L DG  VAVK LS +  QG++EF AE+E L +V H++LV L+GYC  G+   L+YEYM NG L   +  + G   VL W+ R +IA  AA+GL +LH+G  P ++HRD+K +NILLNE   AK+ADFGL+R      E HVST +AGT GY+ PEY ++   + + DVYSFGV+LLE+VT +
Sbjct:  573 KITYPEVLKMTNNF--ERVLGKGGFGTVYHGNL-DGAEVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGKRGG-NVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQ 782          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.068e-50
Identity = 107/228 (46.93%), Postives = 147/228 (64.47%), Query Frame = 3
Query:   12 MRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET--HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTGPEFKDIEG 689
            M+     + +AT++F   N +G+GGFG VYK  L DG+ +AVK+LS+   QG  EF  E   + K++H+NLV LLGY   G E+LLVYE++ + SLD ++ +     E L W+ RYKI  G ARGL +LH      IIHRD+KASNILL+EE   K+ADFG+ARL     T    +  I GTFGY+ PEY   G+ + + DVYSFGV++LE+++GKK +G   +D  G
Sbjct:  330 MKFDFSVLQDATSHFSLENKLGEGGFGAVYKGVLSDGQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQGNE-LEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIISGKKNSGFSSEDSMG 556          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.231e-50
Identity = 100/212 (47.17%), Postives = 141/212 (66.51%), Query Frame = 3
Query:   33 ILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVST-DIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKPTG 665
            +++AT NF   N +G GGFG VYK  L DGK +AVK+LS+   QG  EF  E+  + +++H NLV +LG C  G+EK+L+YEY+ N SLD +L  +T   + L W++R+ I  G ARGL +LH      IIHRD+K SNILL++    K++DFG+AR+    ET  +T  + GT+GY+ PEY   G  + + DV+SFGVI+LE+V+GKK  G
Sbjct:  521 VVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSK-LNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNRG 731          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.231e-50
Identity = 104/218 (47.71%), Postives = 147/218 (67.43%), Query Frame = 3
Query:    3 QPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK 653
            Q  +R     IL AT++F   N IG GGFG+VYK  LP G+ +AVK+L++   QG  EF  E+  L +++H+NLV LLG+C+ G+E++LVYE++ N SLD ++ +    L +L WD R +I  G ARGL +LH      IIHRD+KASNILL+     KVADFG+ARL +  +T  V+  + GTFGY+ PEY ++   + + DVYSFGV+LLE++TG+
Sbjct:  322 QSKLRFDFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRL-LLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITGR 538          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.206e-49
Identity = 105/227 (46.26%), Postives = 148/227 (65.20%), Query Frame = 3
Query:    9 LMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPD----------GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR-LISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKK 656
            L   T   +  AT NF   +++G+GGFG+V+K  + +          G  +AVKKL+Q   QGH+E+ AE+  LG+  H NLV L+GYC   E +LLVYE+M  GSL+  L  R    + L W  R K+A GAA+GLAFLH+  T  +I+RD K SNILL+ E+ AK++DFGLA+   +  ++HVST I GT+GY  PEY  +G  TT+ DVYS+GV+LLE+++G++
Sbjct:   54 LKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLHNAET-SVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRR 279          
BLAST of FC929138 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.575e-49
Identity = 97/219 (44.29%), Postives = 147/219 (67.12%), Query Frame = 3
Query:    3 QPLMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFGEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKKP 659
            +P++++ LV ++EATN F   NI+     G  YKA LPDG T+ VK+LS       ++F +E+  LG+++H NLVPLLG+C   +E LLVY++M NG+L   L+        + W  R ++A GAARGLA+LHHG  P  +H+ I ++ ILL+E+F+A+V D+GL +L+S+ ++  S+   G FGY+ PEY  +  ++  GDVY FG++LLE+VTG+KP
Sbjct:  278 KPIVKIKLVDLIEATNGFDSGNIVVSSRSGVSYKADLPDGSTLEVKRLSSCCELSEKQFRSEINKLGQIRHPNLVPLLGFCVVEDEILLVYKHMANGTLYSQLQQWD-----IDWPTRVRVAVGAARGLAWLHHGCQPLYMHQYISSNVILLDEDFDARVIDYGLGKLVSSQDSKDSSFSNGKFGYVAPEYSSTMVASLSGDVYGFGIVLLEIVTGQKP 491          
The following BLAST results are available for this feature:
BLAST of FC929138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK30_ARATH4.144e-5048.62Putative cysteine-rich receptor-like protein kinas... [more]
CRK2_ARATH4.144e-5049.07Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
GSO1_ARATH5.412e-5046.88LRR receptor-like serine/threonine-protein kinase ... [more]
CRK21_ARATH5.412e-5046.78Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
Y1518_ARATH7.068e-5049.53Probable LRR receptor-like serine/threonine-protei... [more]
CRK26_ARATH7.068e-5046.93Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
SRK6_BRAOE9.231e-5047.17Putative serine/threonine-protein kinase receptor ... [more]
CRK38_ARATH9.231e-5047.71Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
APK1B_ARATH1.206e-4946.26Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y1699_ARATH1.575e-4944.29Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CE03RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CE03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929138 ID=FC929138; Name=FC929138; organism=Citrus clementina; type=EST; length=702bp
AGCAACCTCTCATGAGACTAACTTTGGTTCATATTCTTGAAGCCACAAAC
AACTTCTGCAAGACAAATATTATTGGAGATGGTGGCTTTGGAACTGTATA
CAAAGCCGCTTTGCCTGATGGGAAAACAGTTGCTGTTAAGAAGTTAAGCC
AGGCTAAAACACAGGGGCACCGTGAATTCACTGCTGAAATGGAAACTCTG
GGCAAGGTGAAGCACCAGAATCTTGTGCCGCTGCTTGGTTACTGCTCATT
TGGTGAGGAGAAGCTTCTTGTTTATGAATACATGGTAAATGGAAGCTTGG
ATCTGTGGTTAAGAAATCGGACGGGTTCTCTTGAAGTTCTTGGCTGGGAT
AAACGCTACAAAATTGCATGTGGCGCTGCTCGTGGGCTAGCTTTTCTTCA
TCACGGCTTCACCCCACATATCATTCATCGCGATATCAAAGCAAGCAACA
TCTTACTCAATGAAGAGTTTGAAGCCAAAGTTGCAGACTTTGGGCTTGCT
AGACTGATCAGTGCATGCGAGACACATGTTAGCACTGATATTGCAGGCAC
ATTTGGTTACATTCCCCCCGAGTATGGGCAGAGTGGGAGATCTACCACAA
GGGGTGATGTATACAGCTTTGGTGTAATCTTGCTGGAATTGGTGACTGGA
AAAAAGCCTACGGGGCCCGAATTCAAAGATATAGAAGGTGGGAACTTGGT
CG
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