FC929146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929146 vs. ExPASy Swiss-Prot
Match: RLP7_YEAST (Ribosome biogenesis protein RLP7 OS=Saccharomyces cerevisiae GN=RLP7 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.017e-21 Identity = 60/131 (45.80%), Postives = 76/131 (58.02%), Query Frame = -1 Query: 352 LLFIIRIRGINAVDPKTK--KILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGY------GKLNKQRIALTDNFIIEQAFGQHGIICMEDFIPEILTVGPHFKEANNFLWPF 720 LLFI+R+RG AV+ K KIL LLRL + GVF+K+ K +L + PYV G P+L S++ LI KRG + I L DN I+E+ G HGIIC+ED I EI T+G F N FL PF Sbjct: 141 LLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGESFSVCNFFLQPF 271
BLAST of FC929146 vs. ExPASy Swiss-Prot
Match: RLP7_CANGA (Ribosome biogenesis protein RLP7 OS=Candida glabrata GN=RLP7 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.489e-20 Identity = 54/136 (39.71%), Postives = 84/136 (61.76%), Query Frame = -1 Query: 352 NPEGKLLFIIRIRGINA--VDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRG---YGKLNKQ---RIALTDNFIIEQAFGQHGIICMEDFIPEILTVGPHFKEANNFLWPF 735 N E +LLF++R++G A + K +IL LRL ++ VF+K+ + T ++L + PYV G P+LKS++ LI KR Y + +++ I L DN I+E+ G G+IC++D I EI T+G +F + N FL PF Sbjct: 131 NGEEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVGKPSLKSIRSLIQKRSKIVYKREDEEEAKEIILNDNNIVEEKLGDCGVICIDDIIHEIATLGENFTKCNFFLQPF 266
BLAST of FC929146 vs. ExPASy Swiss-Prot
Match: RLP7_KLULA (Ribosome biogenesis protein RLP7 OS=Kluyveromyces lactis GN=RLP7 PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 8.475e-20 Identity = 55/134 (41.04%), Postives = 77/134 (57.46%), Query Frame = -1 Query: 352 EGKLLFIIRIRGINAVD--PKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNK------QRIALTDNFIIEQAFGQHGIICMEDFIPEILTVGPHFKEANNFLWPF 729 E LLF+IR++G AV K K+L LLRL ++ GVF+K+ K +L V PY+ G P+L S++ LI KR + + I L DN I+E+ G G+IC+ED I EI T+G +F + FL PF Sbjct: 134 EPSLLFVIRVKGPTAVKIPAKAYKVLSLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLIQKRSRIMWQRPEDKEPKEIILNDNNIVEEKLGDEGVICIEDIIHEISTLGENFSKCTFFLLPF 267
BLAST of FC929146 vs. ExPASy Swiss-Prot
Match: RL7_ENCCU (60S ribosomal protein L7 OS=Encephalitozoon cuniculi GN=RPL7 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.224e-18 Identity = 52/168 (30.95%), Postives = 93/168 (55.36%), Query Frame = -1 Query: 244 FYVNPEGKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNFIIEQAFGQHGIICMEDFIPEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRN-PYVEGGDAGNREDYINELIRRM 744 FYV E + +I IR PK +K+L+L RL++I V ++ NK+T ML ++ +V +G ++ +++L+Y +G G+ R+ LT+ FI + G+ I C+E+ + I FK+ N+FL+PF +++ + +GG GN +D ++ L+ RM Sbjct: 73 FYVPKEAEFFAVILIRSKCNCPPKVRKVLELFRLKRINTCVLVRNNKSTRKMLQIIKDHVAFGTIGMELLRKLVYTKGSGRNGHVRVKLTNEFIEDMFDGK--IRCIEELVHHIYNGTEMFKKVNSFLYPFHLSPPRGGFKGQKSKSFNDGGSVGNHQDLLSNLLERM 238
BLAST of FC929146 vs. ExPASy Swiss-Prot
Match: RLP7_ASHGO (Ribosome biogenesis protein RLP7 OS=Ashbya gossypii GN=RLP7 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.598e-18 Identity = 50/131 (38.17%), Postives = 75/131 (57.25%), Query Frame = -1 Query: 352 LLFIIRIRGINA--VDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGY------GKLNKQRIALTDNFIIEQAFGQHGIICMEDFIPEILTVGPHFKEANNFLWPF 720 LLF++R+RG A + K ++L LLRL ++ GVF+++ +L V PYV G P+L S++ L+ KR G+ + L DN ++E+ G G+IC+ED I EI T+G F + N FL PF Sbjct: 112 LLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGRPSLASIRALVQKRARVVHQRAGEAAPVEMVLNDNGVVEERLGDEGVICVEDIIHEIATMGEAFAKCNFFLLPF 242
BLAST of FC929146 vs. ExPASy Swiss-Prot
Match: RLP7_DEBHA (Ribosome biogenesis protein RLP7 OS=Debaryomyces hansenii GN=RLP7 PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.036e-17 Identity = 55/135 (40.74%), Postives = 81/135 (60.00%), Query Frame = -1 Query: 352 KLLFIIRI----RGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGY-----GKLNKQRIA-LTDNFIIEQAFGQH-GIICMEDFIPEILTVGPHFKEANNFLWPF 723 KLLFIIRI +G+ V K +K+L LLRL + GVF+K+ AT+ +L + PY+ G P+L S+++L KR + + RI L +N ++E FG G IC+ED I E+ T+G HFK +N++ PF Sbjct: 93 KLLFIIRIPDHTKGLK-VPSKARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKLFQKRACISVIDEETKEPRITKLDNNGVVEDKFGDDLGCICIEDLIHELATLGEHFKTVSNWILPF 226
BLAST of FC929146 vs. ExPASy Swiss-Prot
Match: RLP7_PICJA (Ribosome biogenesis protein RLP7 (Fragment) OS=Pichia jadinii GN=RLP7 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.400e-14 Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = -1 Query: 352 LLFIIRIRG-INAVDP-KTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKL------NKQRIALTDNFIIEQAFGQHGIICMEDFIPEILTVGPHFKEANNFLWPF 720 L I+R G + A P K +K+LQLLRL +I +GVF+K+ + +L + PY P+L++V++L+ KR + +++ L DN ++E+ G GIIC+ED I E + FK +FL PF Sbjct: 32 LYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTVIXQPSLQTVRQLVQKRATVTVTHANDEEPRQVKLNDNNLVEEKLGDEGIICIEDIIHETSHLATTFKTVTHFLDPF 162 The following BLAST results are available for this feature:
BLAST of FC929146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929146 ID=FC929146; Name=FC929146; organism=Citrus clementina; type=EST; length=744bpback to top |