FC929147

Overview
NameFC929147
Unique NameFC929147
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.407e-16
Identity = 51/129 (39.53%), Postives = 77/129 (59.69%), Query Frame = 1
Query:  379 YDSQSPQKI-FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALG 753
            YD     K+ F    + +AT++FSFEN IG+GG+  VYKG+L  G+ +A+KRLTRG+    I +F +E+ ++  + H N  KLLG+  EG   I V E  PN SL   ++  +++  L W +R +I  G
Sbjct:  317 YDYGGQSKLRFDFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQGEI-EFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRLLLTWDMRARIIEG 444          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.914e-16
Identity = 47/121 (38.84%), Postives = 74/121 (61.16%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSEL-GIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEKLK---WGIRYKIALG 753
            +++ +LQ ATN+FS +NL+G+G +  VY+ +  +G+++A+K++         AD  +E+   +AH+DH N  KL GY  E G H+V+ E   NGSL   L+  +E+ K   W  R KIALG
Sbjct:  407 YTVSDLQVATNSFSVDNLLGEGTFGRVYRAQFEDGKVLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLHLAEEESKPLIWNPRVKIALG 527          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.295e-15
Identity = 58/159 (36.48%), Postives = 88/159 (55.35%), Query Frame = 1
Query:  286 LVTLYPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALG 753
            LV ++ ++   +R+ + +E +    N    +   Q     F    +++ATN F   N +G+GG+ EVYKG L +G  VA+KRL++ T+ +   +F +E+ ++A + H N  KLLGY +EG   I V E  PN SL   L+   MK KL W  RYKI  G
Sbjct:  279 LVAVFSVRAKNKRTLNEKEPVAEDGNDITTAGSLQ-----FDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRLSK-TSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGG 431          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.691e-15
Identity = 46/121 (38.02%), Postives = 74/121 (61.16%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKE----KLKWGIRYKIALG 753
            F+L ++++AT+NF     IG+GG+  VYKG L  G+L+A+K+L+   + +   +F++E+G+++ + HPN  KL G  +EG  + +V E   N  L+  L+G  E    KL W  R KI LG
Sbjct:  666 FTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLS-AKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLG 785          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.691e-15
Identity = 47/119 (39.50%), Postives = 71/119 (59.66%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALG 753
            F L  +  AT++FS EN +G+GG+  VYKG   NGQ VA+KRLT+G+    + +F +E+ ++  + H N  KLLG+  EG   I V E  PN SL   ++   ++  L W +R++I  G
Sbjct:  336 FDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPNGQEVAVKRLTKGSGQGDM-EFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEG 453          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.691e-15
Identity = 50/130 (38.46%), Postives = 77/130 (59.23%), Query Frame = 1
Query:  379 YDSQSPQKI--FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALG 753
            +DS + Q +  F L  + +ATNNFS EN +G+GG+  VYKG L +GQ +A+KRL +G+    + +F +E+ ++  + H N  KLLG+  E    I V E  PN SL   ++  +++  L W +RY I  G
Sbjct:  322 FDSNNGQSMLRFDLRMIVTATNNFSLENKLGQGGFGSVYKGILPSGQEIAVKRLRKGSGQGGM-EFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDEEKRRVLTWDVRYTIIEG 450          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.767e-15
Identity = 43/120 (35.83%), Postives = 76/120 (63.33%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE--KLKWGIRYKIAL 750
            +IFS +EL+ AT+NF+   ++G+GG   VYKG L +G++VA+KR ++   ++ + +F++E+ ++A ++H N  KLLG  +E  + + V E  PNG L   L+   +   + W +R  IA+
Sbjct:  402 RIFSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRIVAVKR-SKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHDESDDYTMTWEVRLHIAI 520          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.767e-15
Identity = 65/196 (33.16%), Postives = 99/196 (50.51%), Query Frame = 1
Query:  205 SETKPESKSNSRWHLFYDLFRNKSKKSLVTLYPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKG----------RLRNGQLVAIKRL-TRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGM-KEKLKWGIRYKIALG 753
            S  K +S S+S       L    S K+  +  P  LSI   SS+ E +  PR        S    K F+  EL++AT NF  ++L+G+GG+  V+KG          +  +G +VA+K+L T G       ++L+E+  +  + HPN  KL+GY +EG    +V E  P GSL + L+    + L W IR K+A+G
Sbjct:    7 SSAKVDSSSHSPHANSASLSSRVSSKTSRSTVPSSLSINSYSSV-ESLPTPRT--EGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGH--KEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAIG 197          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.920e-15
Identity = 50/119 (42.02%), Postives = 71/119 (59.66%), Query Frame = 1
Query:  403 IFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKE-KLKWGIRYKIALG 753
            IF+  EL+SAT +F   N +G+GG+  VYKG L +G++VA+K L+ G+  +    F++E+  ++ V H N  KL G   EG    +V E  PNGSL   L+G K   L W  RY+I LG
Sbjct:  681 IFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSR-QGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTLHLDWSTRYEICLG 798          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 45/120 (37.50%), Postives = 76/120 (63.33%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE--KLKWGIRYKIAL 750
            KIFS  EL+ AT+NFS + ++G+GG   VYKG L +G +VA+KR ++   ++ + +F++E+ +++ ++H N  KLLG  +E  + I V E  PNG L   L+   +   + W +R +IA+
Sbjct:  415 KIFSSKELRKATDNFSIDRVLGQGGQGTVYKGMLVDGSIVAVKR-SKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAI 533          
The following BLAST results are available for this feature:
BLAST of FC929147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
CRK38_ARATH3.407e-1639.53Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
SRF7_ARATH9.914e-1638.84Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
CRK19_ARATH1.295e-1536.48Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
Y1765_ARATH1.691e-1538.02Probable LRR receptor-like serine/threonine-protei... [more]
CRK40_ARATH1.691e-1539.50Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK37_ARATH1.691e-1538.46Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
WAKLB_ARATH3.767e-1535.83Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
APK2B_ARATH3.767e-1533.16Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y1561_ARATH4.920e-1542.02Probable LRR receptor-like serine/threonine-protei... [more]
WAKLA_ARATH6.426e-1537.50Wall-associated receptor kinase-like 1 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CF02RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CF02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929147 ID=FC929147; Name=FC929147; organism=Citrus clementina; type=EST; length=754bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGG
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