FC929147

Overview
NameFC929147
Unique NameFC929147
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15029 contig Ccv1_Contig15029:1..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 46/122 (37.70%), Postives = 71/122 (58.20%), Query Frame = 1
Query:  403 IFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGT-ADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEK----LKWGIRYKIAL 750
            + S+  L+S TNNFS +N++G GG+  VYKG L +G  +A+KR+  G  A +  A+F SE+ ++  V H +   LLGY ++G    +V E  P G+L+  L+   E+    L W  R  +AL
Sbjct:  575 LISIQVLRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLAL 696          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 45/129 (34.88%), Postives = 79/129 (61.24%), Query Frame = 1
Query:  379 YDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYGMKEK---LKWGIRYKIALG 753
            Y+ + P   F+L +++ AT++F+  N IG+GG+  V+KG L +G++VA+K+L+   + +   +FL+E+G ++ + HPN  KL G+ +E   + +  E   N SL+S L+  K K   + W  R+KI  G
Sbjct:  660 YEEELPSGTFTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLS-SKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCG 787          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 47/114 (41.23%), Postives = 72/114 (63.16%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALG 753
            +Q+ATN+F+  N IG+GG+ EVYKG   NG+ VA+KRL++ +  +  A+F +E+ ++A + H N  +LLG+ ++G   I V E  PN SL  LL+    + +L W  RY I  G
Sbjct:  346 IQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSR-QGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGG 458          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 47/114 (41.23%), Postives = 70/114 (61.40%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLY--GMKEKLKWGIRYKIALG 753
            +++ATN FS  N IG+GG+ EVYKG   NG  VA+KRL++ ++ +   +F +E+ ++A + H N  +LLG+ I GG  I V E  PN SL   L+    + +L W  RYK+  G
Sbjct:  330 IRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSK-SSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLFDPAKQNQLDWTRRYKVIGG 442          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 52/142 (36.62%), Postives = 75/142 (52.82%), Query Frame = 1
Query:  352 MPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTR--GTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEK-----LKWGIRYKIALG 753
            +P  L +N    + P +  +   L  ATN FS E ++G GG+ EVYK +LR+G +VAIK+L R  G  D    +F++E+  +  + H N   LLGY   G    +V E    GSL ++L+    K     L W  R KIA+G
Sbjct:  829 VPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDR---EFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIG 967          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.393e-15
Identity = 47/139 (33.81%), Postives = 85/139 (61.15%), Query Frame = 1
Query:  343 GIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE--KLKWGIRYKIAL 750
            G+ + + L     + QS  KIFS  EL+ AT+NF+   ++G+GG   VYKG L +G++VA+KR ++   ++ + +F++E+G+++ ++H N  KL+G  +E  + I V E  PNG L   L+   +   + W +R +I++
Sbjct:  389 GLLLKQQLTTRGGNVQS-SKIFSSKELEKATDNFNMNRVLGQGGQGTVYKGMLVDGRIVAVKR-SKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLHHDSDDYTMTWDVRLRISV 525          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 8.393e-15
Identity = 53/160 (33.12%), Postives = 86/160 (53.75%), Query Frame = 1
Query:  295 LYPLKLSIRRSSSMR-----EGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIAL 750
            LY      RRSS MR      G  + +        +    KIFS  EL+ AT+NF+   ++G+GG   VYKG L +G++VA+KR ++   ++ + +F++E+ ++A ++H N  KLLG  +E  + + V E  PNG L   L    +   + W +R  IA+
Sbjct:  370 LYKFIKKQRRSSRMRVFFRRNGGMLLKQQLARKEGNVEMSKIFSSNELEKATDNFNTNRVLGQGGQGTVYKGMLVDGRIVAVKR-SKAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAI 528          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.393e-15
Identity = 47/114 (41.23%), Postives = 72/114 (63.16%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE--KLKWGIRYKIALG 753
            +Q+ATN+F+  N IG+GG+ EVYKG   NG+ VA+KRL++ +  +  A+F +E+ ++A + H N  +LLG+ ++G   I V E  PN SL  LL+   +  +L W  RY I  G
Sbjct:  344 IQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSR-QGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQIQLDWMQRYNIIGG 456          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.393e-15
Identity = 54/136 (39.71%), Postives = 74/136 (54.41%), Query Frame = 1
Query:  382 DSQSPQKI-FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK----------LKWGIRYKIALG 753
            D  SPQ + F    L++AT+ FS  N +GKGG+ EVYKG L N   VA+KRL+   + +   +F +E+ I+A + H N  +LLG+ +E    I V E  PN SL   L+G K+K          L W  RY I  G
Sbjct:  300 DMTSPQSLQFDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETEVAVKRLS-SNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGG 434          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14
Identity = 49/118 (41.53%), Postives = 70/118 (59.32%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKE-KLKWGIRYKIALG 753
            F+  EL+SAT +F   N +G+GG+  VYKG+L +G+ VA+K L+ G+  +    F++E+  ++ V H N  KL G   EG    +V E  PNGSL   L+G K   L W  RY+I LG
Sbjct:  681 FTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSR-QGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTLHLDWSTRYEICLG 797          
The following BLAST results are available for this feature:
BLAST of FC929147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
TMK1_ARATH6.426e-1537.70Probable receptor protein kinase TMK1 OS=Arabidops... [more]
RKF1_ARATH6.426e-1534.88Probable LRR receptor-like serine/threonine-protei... [more]
CRK8_ARATH6.426e-1541.23Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK15_ARATH6.426e-1541.23Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
BRL1_ARATH6.426e-1536.62Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
WAKLI_ARATH8.393e-1533.81Wall-associated receptor kinase-like 22 OS=Arabido... [more]
WAKLD_ARATH8.393e-1533.13Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
CRK6_ARATH8.393e-1541.23Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK32_ARATH8.393e-1539.71Putative cysteine-rich receptor-like protein kinas... [more]
Y5614_ARATH1.096e-1441.53Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CF02RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CF02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929147 ID=FC929147; Name=FC929147; organism=Citrus clementina; type=EST; length=754bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGG
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