FC929147

Overview
NameFC929147
Unique NameFC929147
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.750e-12
Identity = 42/114 (36.84%), Postives = 69/114 (60.53%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKE--KLKWGIRYKIALG 753
            +++ATN FS  N +G+G + EVYKG+  NG  VA+KRL++ +  +    F +E  +++ + H N A+LLG+ ++G G  ++ E   N SL   L+  ++  +L W  RYKI  G
Sbjct:  346 IEAATNKFSKSNKLGEGRFGEVYKGKFSNGTEVAVKRLSKVSGQD-TKKFRNEAVLVSKIQHRNLARLLGFCLQGDGKFLIYEFVLNKSLDYFLFDPEKQGELDWTRRYKIIGG 458          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.286e-12
Identity = 50/149 (33.56%), Postives = 79/149 (53.02%), Query Frame = 1
Query:  355 PRNLFVNSYDSQSPQKIF-------SLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMK--------EKLKWGIRYKIALG 753
            PRN   N+  S +P K+        +L EL     NF  + LIG+G Y  V+ G+ + G+ VAIK+L   +++E  +DF S+L +++ + H +  +LLGY +E    I++ + +  GSL  +L+G K          L W  R KIA G
Sbjct:   39 PRN--PNAPRSGAPAKVLPIEIPSVALDELNRMAGNFGNKALIGEGSYGRVFCGKFK-GEAVAIKKLDASSSEEPDSDFTSQLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYG 184          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.286e-12
Identity = 44/121 (36.36%), Postives = 65/121 (53.72%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIAD-FLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEK---LKWGIRYKIALG 753
            +++  LQ ATN+FS EN+IG+G    VY+    NG+++AIK++          D FL  +  M+ + HPN   L GY  E G   +V E   NG+L   L+   ++   L W  R K+ALG
Sbjct:  383 YTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALG 503          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.286e-12
Identity = 50/143 (34.97%), Postives = 77/143 (53.85%), Query Frame = 1
Query:  355 PRNLFVNSYDSQSPQ------KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLY---GMKEKLKWGIRYKIALG 753
            P ++F +    + P+      K FSL ELQ A++ FS +N++G+GG+ +VYKGRL +G LVA+KRL           F +E+ +++   H N  +L G+ +      +V     NGS+AS L      +  L W  R +IALG
Sbjct:  267 PLDIFFDVPAEEDPEVHLGQLKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALG 409          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.286e-12
Identity = 47/119 (39.50%), Postives = 69/119 (57.98%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALG 753
            F    + +AT+ F   N +G+GG+ EVYKG   +G  VA+KRL++ +  +   +F +E+ ++A + H N  KLLGY +EG   I V E  PN SL   L+   M+ +L W  RYKI  G
Sbjct:  332 FDFKAIVAATDIFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKNSG-QGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTMQGQLDWSRRYKIIGG 449          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.286e-12
Identity = 42/118 (35.59%), Postives = 71/118 (60.17%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKE-KLKWGIRYKIALG 753
            FSL E++  T+NF   N+IG GG+ +VYKG +  G  VAIK+ +   +++ + +F +E+ +++ + H +   L+GY  EGG M ++ +    G+L   LY  K  +L W  R +IA+G
Sbjct:  509 FSLSEIKHGTHNFDESNVIGVGGFGKVYKGVIDGGTKVAIKK-SNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKRPQLTWKRRLEIAIG 625          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12
Identity = 43/121 (35.54%), Postives = 72/121 (59.50%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGT-ADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYG----MKEKLKWGIRYKIAL 750
            FS  EL+ AT  FS ++ +GKG ++ V+KG LR+G +VA+KR  + +   +   +F +EL +++ ++H +   LLGY  +G    +V E   +GSL   L+G    +K++L W  R  IA+
Sbjct:  493 FSYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAV 613          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12
Identity = 44/123 (35.77%), Postives = 73/123 (59.35%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKR-LTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYG----MKEKLKWGIRYKIAL 750
            ++F+  EL+ A + F  E+++GKG ++ VYKG LR+G  VA+KR +      +   +F +EL +++ ++H +   LLGY  E G   +V E   +GSL + L+G    +KE+L W  R  IA+
Sbjct:  498 RVFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAV 620          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12
Identity = 48/119 (40.34%), Postives = 63/119 (52.94%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGT-ADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEKLKWGIRYKIAL 750
            KIF L EL+ AT+ F   N +G+G +  VYK  L +G  VA+KR    T        F SEL I+  + H N   LLGY  E G   +V E  P+G+L   L+G   +L W +R KI L
Sbjct:  505 KIFRLSELKDATHGFKEFNELGRGSFGFVYKAVLSDGIHVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLHGDLSQLDWSMRLKIML 623          
BLAST of FC929147 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.899e-12
Identity = 48/122 (39.34%), Postives = 68/122 (55.74%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKE---KLKWGIRYKIALG 753
            K F+L EL  AT+NFS +N++G+GG+ +VYKGRL +G LVA+KRL           F +E+ +++   H N  +L G+ +      +V     NGS+AS L    E    L W  R  IALG
Sbjct:  280 KRFTLRELLVATDNFSNKNVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALG 401          
The following BLAST results are available for this feature:
BLAST of FC929147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
CRK22_ARATH1.750e-1236.84Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
Y2197_ARATH2.286e-1233.56Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
SRF8_ARATH2.286e-1236.36Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
SERK1_ARATH2.286e-1234.97Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
CRK20_ARATH2.286e-1239.50Putative cysteine-rich receptor-like protein kinas... [more]
ANX2_ARATH2.286e-1235.59Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
CRI4_MAIZE2.985e-1235.54Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
ACR4_ARATH2.985e-1235.77Serine/threonine-protein kinase-like protein ACR4 ... [more]
ACCR2_ARATH2.985e-1240.34Serine/threonine-protein kinase-like protein CCR2 ... [more]
SERK4_ARATH3.899e-1239.34Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CF02RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CF02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929147 ID=FC929147; Name=FC929147; organism=Citrus clementina; type=EST; length=754bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGG
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