FC929167

Overview
NameFC929167
Unique NameFC929167
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_SHIB3 (Glycogen synthase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 45/117 (38.46%), Postives = 61/117 (52.14%), Query Frame = 3 
Query:    9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 341
            AD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV     E    G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_SERP5 (Glycogen synthase OS=Serratia proteamaculans (strain 568) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 3 
Query:    9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKW 317
            AD I++PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV     E    G   G    DC+AV      A+   +RRA+  +   +    + ++ M+ D  W+  A+++
Sbjct:  367 ADVIMVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVVDCALENLADGSASGFVFDDCDAV------ALGNAIRRAMVLWSRPKHWRHVQRHAMSVDFGWQVAAQEY 469
[Close]
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_LACLA (Glycogen synthase OS=Lactococcus lactis subsp. lactis GN=glgA PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 50/114 (43.86%), Postives = 66/114 (57.89%), Query Frame = 3 
Query:    9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEE 323
            +DF L+PS FEPCGL Q+ AMRYGT+PIV   GGL DTV       +EG TGF      VD E    V+      T+ RAL  YG   + L +M+ + M++D SW   A+++ E
Sbjct:  371 SDFFLMPSAFEPCGLSQMIAMRYGTLPIVHEIGGLKDTVIPFNPISKEG-TGFGF----VDFEGQILVE------TINRALEVYGKEPEVLNKMVLSAMSKDFSWGTKAQQYIE 473
[Close]
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_FRATW (Glycogen synthase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 3 
Query:    9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 338
            +D I++PSRFEPCGL QL+ + YGT+P+V   GGL DTV +           TGF    FSV+          +++  +RRA A Y  +    ++ K  M Q ++W   A+K  +   NL
Sbjct:  375 SDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNL 484
[Close]
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_FRATT (Glycogen synthase OS=Francisella tularensis subsp. tularensis GN=glgA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 3 
Query:    9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 338
            +D I++PSRFEPCGL QL+ + YGT+P+V   GGL DTV +           TGF    FSV+          +++  +RRA A Y  +    ++ K  M Q ++W   A+K  +   NL
Sbjct:  375 SDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNL 484
[Close]
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_FRATO (Glycogen synthase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 42/122 (34.43%), Postives = 64/122 (52.46%), Query Frame = 3 
Query:    9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 344
            +D I++PSRFEPCGL QL+ + YGT+P+V   GGL DT+ +           TGF    FSV+          +++  +RRA A Y  +    ++ K  M Q ++W   A+K  +   NL +
Sbjct:  375 SDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTIIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNLVI 486
[Close]
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_FRATM (Glycogen synthase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 3 
Query:    9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 338
            +D I++PSRFEPCGL QL+ + YGT+P+V   GGL DTV +           TGF    FSV+          +++  +RRA A Y  +    ++ K  M Q ++W   A+K  +   NL
Sbjct:  375 SDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVIDSSLENLADGTATGFVFDEFSVE----------SLTLVIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNL 484
[Close]
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_FRATH (Glycogen synthase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 42/122 (34.43%), Postives = 64/122 (52.46%), Query Frame = 3 
Query:    9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 344
            +D I++PSRFEPCGL QL+ + YGT+P+V   GGL DT+ +           TGF    FSV+          +++  +RRA A Y  +    ++ K  M Q ++W   A+K  +   NL +
Sbjct:  375 SDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTIIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNLVI 486
[Close]
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_FRATF (Glycogen synthase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 42/122 (34.43%), Postives = 64/122 (52.46%), Query Frame = 3 
Query:    9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 344
            +D I++PSRFEPCGL QL+ + YGT+P+V   GGL DT+ +           TGF    FSV+          +++  +RRA A Y  +    ++ K  M Q ++W   A+K  +   NL +
Sbjct:  375 SDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTIIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNLVI 486
[Close]
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_FRAT1 (Glycogen synthase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 3 
Query:    9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 338
            +D I++PSRFEPCGL QL+ + YGT+P+V   GGL DTV +           TGF    FSV+          +++  +RRA A Y  +    ++ K  M Q ++W   A+K  +   NL
Sbjct:  375 SDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNL 484
The following BLAST results are available for this feature:
BLAST of FC929167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
GLGA_SHIB31.198e-1238.46Glycogen synthase OS=Shigella boydii serotype 18 (... [more]
GLGA_SERP51.198e-1237.61Glycogen synthase OS=Serratia proteamaculans (stra... [more]
GLGA_LACLA1.198e-1243.86Glycogen synthase OS=Lactococcus lactis subsp. lac... [more]
GLGA_FRATW1.198e-1235.83Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRATT1.198e-1235.83Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRATO1.198e-1234.43Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRATM1.198e-1235.83Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRATH1.198e-1234.43Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRATF1.198e-1234.43Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRAT11.198e-1235.83Glycogen synthase OS=Francisella tularensis subsp.... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CG11RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CG11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929167 ID=FC929167; Name=FC929167; organism=Citrus clementina; type=EST; length=707bp
GGCACGAGGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCTTGTGGT
CTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGTGGCTTC
CACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCCAGA
TGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGATGTGGCT
GCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTACTCAAGC
TTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCATGGAAAG
GACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTTGCTGGT
AGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAAGGAAAA
TGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTATTTTGGA
CCGCAAACATGTTCCTGTAATTCTCCACAACCCAAGATATTACTTAGGAA
ATAACATAGGTTGGCAGTATATGCAGCATGCGCTATTTTCAATAATGGTT
TGGAGTTGAGACATTAGTGTTTACCTTGTATAATGAAATATTAAGTTCTG
TTTTACAGTTTTGTAAAAGGGCTCTGAGGGCTGTCGCCACTCTCCTGAAA
TGAAAAAGTTCAACTGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA
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