FC929167
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_MARAV (Glycogen synthase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=glgA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 47/124 (37.90%), Postives = 65/124 (52.42%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT-YGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSE 356 AD L+PSRFEPCGL Q++++RYGTVP+V GGL DTV E GF + D A+ + RALA + ++ +NGM D SWK A ++ NL +AG++ Sbjct: 371 ADIFLMPSRFEPCGLNQMYSLRYGTVPVVHGVGGLNDTVFDPNEETPEQANGFVFREATPD----------ALHAAITRALAAREDRKTWRKLQENGMKGDYSWKNRAGEYAALYRNL-IAGND 483
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_MANSM (Glycogen synthase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=glgA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 40/105 (38.10%), Postives = 60/105 (57.14%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKWEE 323 D IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV + T + + + A+S + RA + + Q ++ M QD SW+ A+++EE Sbjct: 369 DVILVPSRFEPCGLTQLYGLKYGTLPLVRQTGGLADTVVDS-TAENIKERRATGFVFNEANSQALSHAISRAFSLWKKQRTWFTVRTVAMEQDFSWQISARRYEE 472
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIG (Glycogen synthase OS=Haemophilus influenzae (strain PittGG) GN=glgA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 317 D IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV + T + + + + A+ ++RA A + +A A + + MAQD SW+ A+++ Sbjct: 368 DVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTVVDS-TSESIKACTATGFVFESATPEALRHCLQRAFALWQKPRAWAIVRTDAMAQDFSWRKAAEQY 469
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_ERWCT (Glycogen synthase OS=Erwinia carotovora subsp. atroseptica GN=glgA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 41/109 (37.61%), Postives = 57/109 (52.29%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 317 AD I++PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G DC V ++S +RR + L + + MA D W+ A+ + Sbjct: 367 ADVIMVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGLASGFVFNDC------SVGSLSRAIRRVFVLWSRPTLWRYVQRQAMAMDFGWQVSAQAY 469
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_ENTS8 (Glycogen synthase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=glgA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 42/111 (37.84%), Postives = 58/111 (52.25%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEE 323 AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV + G G D A ++ +RRA + +L + + M D SW+ AK + E Sbjct: 367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMGMDFSWQVAAKSYRE 471
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_DEIDV (Glycogen synthase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=glgA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 43/104 (41.35%), Postives = 58/104 (55.77%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKW 317 +D +PSRFEPCGL Q+ AMRYGT+P+V TGGLVDTV GF+ P A+ ++A A + Q+ E + MA D SW GPA+++ Sbjct: 344 SDAFAMPSRFEPCGLSQMIAMRYGTLPVVRETGGLVDTVPPD-VGFRF----------QPATPEALVEACQQARAAFEDQSDWEARVARAMALDFSWDGPAREY 436
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_CLONN (Glycogen synthase OS=Clostridium novyi (strain NT) GN=glgA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 45/113 (39.82%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV--EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 338 +D L+PSRFEPCG+ QL A+RYG+VPIV TGGL DTV FTG G A D + T++RA+ Y +++++ GM D SW+ A+K+ N+ Sbjct: 369 SDMFLMPSRFEPCGIGQLIALRYGSVPIVRETGGLNDTVFSYNEFTGEGNGFSFTSFNARD------MLYTIKRAIGFYYDKDVWSKLVQRGMNGDYSWEKAAEKYMRVYSNI 475
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA1_GEOMG (Glycogen synthase 1 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glgA1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 44/113 (38.94%), Postives = 65/113 (57.52%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNGMAQDLSWKGPAKKWEE 323 ADF L+PS FEPCGL Q++++RYGT+PIV +TGGL D+VE TGF+ S D A+ TV A+ T + A+ ++ N MA+ +W+ A ++E+ Sbjct: 378 ADFFLMPSAFEPCGLNQMYSLRYGTLPIVRATGGLDDSVENFDEKTLVGTGFKFWS----------RDAGALFDTVGWAVHTWYHRKDAMERLIANAMAKRFTWEDAAARYED 480
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_RHITR (Glycogen synthase OS=Rhizobium tropici GN=glgA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGS 353 D I+IPSRFEPCGL QL+ +R G +PIVA TGGL DT+ + + + PV + +RRA+ + + + +M K GM D+SW A+++ +L G+ Sbjct: 367 DAIIIPSRFEPCGLTQLYGLRSGCLPIVARTGGLNDTIIDANHAALQAKVATGIQ-FSPVTAEGLLQAMRRAMHLFQDRKVWTQMQKQGMKSDVSWGRSAERYAALYSSLVSRGA 480
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_PROM0 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9301) GN=glgA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 51/142 (35.92%), Postives = 72/142 (50.70%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 413 +D L+PSRFEPCG+ QL AMRYG++PIV GGLVDTV TGF F +P+D ++ VR A + + K M+Q+ SW+ A ++E ++ +V G EP D E+ + A P Sbjct: 348 SDAFLMPSRFEPCGISQLLAMRYGSIPIVRRVGGLVDTVLPHDPENNSGTGFCFDRF-------EPIDF--YTSLVRSWEAFRHKDSWKLLQKRAMSQEFSWQRSALEYE--IMYKDVCGIKEPSPDVAEVEKFSYGQSADP 478 The following BLAST results are available for this feature:
BLAST of FC929167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929167 ID=FC929167; Name=FC929167; organism=Citrus clementina; type=EST; length=707bpback to top |