FC929167
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_PSE14 (Glycogen synthase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=glgA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 33/97 (34.02%), Postives = 56/97 (57.73%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSW 296 +DF+L+PSR+EPCGL Q++A R+G++P+ +TGGL DT+E+G TGF +++ + + + R + + L M+ MA +W Sbjct: 374 SDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIEDGVTGFLFKESTIE----------SYTEALNRTFQVFAHRELLNAMRCRAMAAPFNW 460
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_PROM4 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9211) GN=glgA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 50/136 (36.76%), Postives = 69/136 (50.74%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 413 D L+PSRFEPCG+ QL AMRYG++P+V + GGLVDTV Q G+ F D +P+D + VR A ++ + M Q SW A ++E + +V G EP D EE+ + A P Sbjct: 349 DAFLMPSRFEPCGISQLLAMRYGSIPVVRNVGGLVDTVSPHDPSKQTGTGFCFD--RFEPIDF--YTALVRSWEAYRHRRSWRRLQIRAMTQTYSWDRSAYEYEN--MYKDVCGVKEPSPDAEEVEKFSVGQDADP 478
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_LEPCP (Glycogen synthase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=glgA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 41/112 (36.61%), Postives = 59/112 (52.68%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV--------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKW 317 +D IL+PSRFEPCGL QL+ ++YGT+P+V GGLVDTV + TGF FS D + RA A + +A ++ + GM Q W+ A+++ Sbjct: 377 SDLILVPSRFEPCGLTQLYGLKYGTLPVVRRVGGLVDTVADARLETLDHDATGFVFDDFSAD----------GLIGACLRAKALFRRRADWLQVQRRGMQQPFGWEDSARQY 478
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_KLEP3 (Glycogen synthase OS=Klebsiella pneumoniae (strain 342) GN=glgA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 41/111 (36.94%), Postives = 58/111 (52.25%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 323 AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV + G G D A+ ++ +RRA + +L + + M D SW+ A + E Sbjct: 367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGLATGFVFEDSNAL------SLLRAIRRAFVLWSRPSLWRYVQRQAMNMDFSWQVAANSYRE 471
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_FINM2 (Glycogen synthase OS=Finegoldia magna (strain ATCC 29328) GN=glgA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 41/105 (39.05%), Postives = 58/105 (55.24%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 323 ADF+++PS FEPCG+ QL AMRYGT+P+V TGGL DTV + F F ++ D T+RRA++ Y + +N M W+ AK++ E Sbjct: 367 ADFLMMPSIFEPCGISQLIAMRYGTIPVVRETGGLRDTV-QSFNEFSKEGNGFSFTNINAHDFL---YTLRRAISFYYNDDFNIIKENAMNSKNDWEKSAKEYIE 467
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA2_METCA (Glycogen synthase 2 OS=Methylococcus capsulatus GN=glgA2 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 41/106 (38.68%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKW 317 +D +++PSRFEPCGL QL AMRYGT+P+V GGL DTV ++ F+ + + D + + + RA+A Y E+MKN M D SW P + + Sbjct: 374 SDVMVVPSRFEPCGLTQLIAMRYGTIPVVREIGGLADTVIDKDFSHRPL--HERNGYVFRDYDERGLESALGRAIACYYQYPDHFRELMKNAMRYDYSWNHPGQDY 477
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_THET2 (Glycogen synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=glgA PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 42/105 (40.00%), Postives = 56/105 (53.33%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 323 A+ +L+PSRFEPCGL+Q+ A RYGT P+ + GGL DTVE+G G V E P + + R A EM M +D SW+GPA+ + E Sbjct: 340 AEAVLVPSRFEPCGLVQMIASRYGTPPVARAVGGLKDTVEDGRAG-------VLFETYHPEGLLYGVLRLFRLGA-------EEMGLRAMEKDFSWEGPARAYRE 430
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_THECA (Glycogen synthase OS=Thermus caldophilus GN=glgA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 42/105 (40.00%), Postives = 56/105 (53.33%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 323 A+ +L+PSRFEPCGL+Q+ A RYGT P+ + GGL DTVE+G G V E P + + R A EM M +D SW+GPA+ + E Sbjct: 341 AEAVLVPSRFEPCGLVQMIASRYGTPPVARAVGGLKDTVEDGRAG-------VLFETYHPEGLLYGVLRLFRLGA-------EEMGLRAMEKDFSWEGPARAYRE 431
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_SYNR3 (Glycogen synthase OS=Synechococcus sp. (strain RCC307) GN=glgA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 50/129 (38.76%), Postives = 71/129 (55.04%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVD-CEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIA 383 +D L+PSRFEPCG+ QL +MRYGT+P+V GGLVDTV Q G+ F D EA+D + T + RA Y Q + ++MK M D SW A +++ + +V G EP + + +A Sbjct: 348 SDAFLMPSRFEPCGISQLLSMRYGTIPVVRRVGGLVDTVPPYVPATQEGNGFCFDRYEAID------LYTALVRAWEAYRHQDSWQQLMKRVMQVDFSWARSALEYDR--MYRDVCGMKEPTPEADAVA 468
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_PROMM (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=glgA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 45/106 (42.45%), Postives = 58/106 (54.72%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 323 +D L+PSRFEPCG+ QL AMRYG+VP+V GGLVDTV Q G+ F D +PVD + VR A E+ + GM Q+ SW A +E+ Sbjct: 348 SDAFLMPSRFEPCGISQLLAMRYGSVPVVRKVGGLVDTVPSYDPIHQTGTGFCFD--RFEPVDF--YTALVRSWEAFRHRDCWRELQQRGMTQNYSWDRSALDYEQ 449 The following BLAST results are available for this feature:
BLAST of FC929167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929167 ID=FC929167; Name=FC929167; organism=Citrus clementina; type=EST; length=707bpback to top |