FC929167
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_KLEP7 (Glycogen synthase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=glgA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 42/111 (37.84%), Postives = 58/111 (52.25%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 323 AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G D A+ ++ +RRA + +L + + M D SW+ A + E Sbjct: 367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVADSSLENLADGLATGFVFEDSNAL------SLLRAIRRAFVLWSRPSLWRYVQRQAMNMDFSWQVAANSYRE 471
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_EDWI9 (Glycogen synthase OS=Edwardsiella ictaluri (strain 93-146) GN=glgA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 41/102 (40.20%), Postives = 55/102 (53.92%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSW 296 AD I++PSRFEPCGL QL+ ++YG++P+V TGGL DTV E G G D A D ++ +RRAL +G L + + MAQ W Sbjct: 367 ADVIVVPSRFEPCGLTQLYGLKYGSLPLVRHTGGLADTVNDCALENLADGSATGFVFHDANAAD------LARAIRRALVLWGRPTLWRYVQRQAMAQSFGW 462
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_ALHEH (Glycogen synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=glgA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 45/121 (37.19%), Postives = 64/121 (52.89%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDG 371 D L+PSRFEPCGL QL+++RYGT P+V +TGGL DTV + T G+ + + A++ TV RA A + A + GM D SW A+ + L + + PG +G Sbjct: 372 DLFLMPSRFEPCGLNQLYSLRYGTPPVVTATGGLADTVMDVDTDPTAGNGF----HLPAANAGALAATVERATAHWRRPAAWKRIQARGMGGDYSWDASAEAY------LRLYRNTPGNNG 482
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_THELT (Glycogen synthase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glgA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 40/105 (38.10%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA--LAEMMKNGMAQDLSWKGPAKKW 317 +D L+PSR+EPCGL Q++++RYGTVPIV TGGL D+V+E + + + D A + TV +A+ Y + +++KN M D+SW AK++ Sbjct: 373 SDMFLMPSRYEPCGLGQMYSLRYGTVPIVRYTGGLADSVKE----YDPKTRDGNGFGFREYDTAHLLETVAKAVYFYKKEKDHWGKVVKNAMKTDVSWDRSAKQY 473
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_ROSDO (Glycogen synthase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=glgA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEE 323 +D ILIPSRFEPCGL QL+ +RYGT+P+VA TGGL DT+ + + + + PV A+S + R + + + MM+ M + W+ +K + E Sbjct: 367 SDAILIPSRFEPCGLTQLYGLRYGTIPVVARTGGLADTIIDANEAALAATCATGVQFA-PVTPDALSHAIDRCCDLFAERKTWSGMMRCAMRHPVGWETSSKAYLE 471
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_RALSO (Glycogen synthase OS=Ralstonia solanacearum GN=glgA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 44/113 (38.94%), Postives = 57/113 (50.44%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 317 AD +L SRFEPCGL L+AMRYGTVP+ + GGLVDT+ + G TGF D A++ V RAL + +A + NGM D W PA ++ Sbjct: 370 ADLLLHGSRFEPCGLTPLYAMRYGTVPVASRVGGLVDTIADRGSPEAALRGATGF----------LFDGETPEAMAGAVARALRVFVQPRAWRVLQYNGMTTDFGWSQPASEY 472
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_PROMS (Glycogen synthase OS=Prochlorococcus marinus (strain AS9601) GN=glgA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 52/142 (36.62%), Postives = 73/142 (51.41%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGF-TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 413 +D L+PSRFEPCG+ QL AMRYG++PIV GGLVDTV E TGF F +P+D ++ VR A + + K M+Q+ SW+ A ++E ++ +V G EP D E+ + A P Sbjct: 348 SDAFLMPSRFEPCGISQLLAMRYGSIPIVRRVGGLVDTVLPHDPENNIGTGFCFDRF-------EPIDF--YTSLVRSWEAFRHKDSWELLQKRAMSQEFSWQRSALEYE--VMYKDVCGIKEPSPDVAEVEKFSYGQSADP 478
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_PROM2 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9215) GN=glgA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 51/142 (35.92%), Postives = 71/142 (50.00%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 413 +D L+PSRFEPCG+ QL AMRYG++PIV GGLVDTV TGF F +P+D ++ VR A + + K M Q+ SW+ A ++E ++ +V G EP D E+ + A P Sbjct: 348 SDAFLMPSRFEPCGISQLLAMRYGSIPIVRRVGGLVDTVLPHDPENNHGTGFCFDRF-------EPIDF--YTSLVRSWEAFRHKDSWELLQKRAMTQEFSWQRSALEYE--VMYKDVCGIKEPSPDVAEVEKFSYGQSADP 478
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIN (Glycogen synthase OS=Haemophilus influenzae GN=glgA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 39/103 (37.86%), Postives = 61/103 (59.22%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 317 D IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV + T + + + + A+ ++RA A + +A A + + M QD SW+ A+++ Sbjct: 368 DVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTVVDS-TSESIKARTATGFVFESATPEALRHCLQRAFALWQKPRAWAMVRTDAMEQDFSWRKAAEQY 469
BLAST of FC929167 vs. ExPASy Swiss-Prot
Match: GLGA_HAEI8 (Glycogen synthase OS=Haemophilus influenzae (strain 86-028NP) GN=glgA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 39/103 (37.86%), Postives = 61/103 (59.22%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 317 D IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV + T + + + + A+ ++RA A + +A A + + M QD SW+ A+++ Sbjct: 368 DVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTVVDS-TSESIKARTATGFVFESATPEALRHCLQRAFALWQKPRAWAMVRTDAMEQDFSWRKAAEQY 469 The following BLAST results are available for this feature:
BLAST of FC929167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929167 ID=FC929167; Name=FC929167; organism=Citrus clementina; type=EST; length=707bpback to top |