FC929193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.567e-11 Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 1 Query: 82 SNRLQKELVEWQVNPPAGFK-HKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDIL----YDSWSPAMTVSSVCISILSMLS 408 ++RL++EL PP G + D + ++ G T Y F+L+V PE YP E PQ+ FL P HP+I S G ICLD+L +W P++ +++V SI ++S Sbjct: 4 ASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPI-YHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMS 116
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.567e-11 Identity = 41/138 (29.71%), Postives = 67/138 (48.55%), Query Frame = 1 Query: 88 RLQKELVEWQVNPPAGFKHKVTDNLQRWI-IEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWW 498 R+ KE P G +N R+ + V G + + F+L++ PE YPM AP+V F+ HP+I G ICLD+L D WSPA+ + ++ +SI ++LS+ A++ + + + R W Sbjct: 7 RIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKI-YHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREW 143
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 44/116 (37.93%), Postives = 62/116 (53.45%), Query Frame = 1 Query: 85 NRLQKELVEWQVNPPAGF----KHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDIL----YDSWSPAMTVSSVCISILSMLS 408 +RL++EL PP G D+L+ II +G+P Y F L++ PE YP E P++ FL P HP+I S G ICLDIL +W PA+ +S+V SI ++S Sbjct: 5 SRLKRELQLLNKEPPPGVICWQNESNMDDLRAQIIGGSGSP---YEGGIFNLEIIVPERYPFEPPKIRFLTPI-YHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMS 116
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 37/117 (31.62%), Postives = 60/117 (51.28%), Query Frame = 1 Query: 121 NPPAGFKHKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--------SWSPAMTVSSVCISILSMLSSSTVKQRPADND 444 NP FK V +N L W + + G T Y F+ ++ FP +YP E P++ F HP+IY +G +C+ IL+ +WSPA + +V +S++S+ + PA+ D Sbjct: 16 NPSEHFKVSVNENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEM-WHPNIYPDGRLCISILHTDNVEERGMTWSPAQKIETVLLSVISLFNEPNT-DSPANVD 130
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 41/134 (30.60%), Postives = 65/134 (48.51%), Query Frame = 1 Query: 43 SSAPSRKALSKIASNRLQKELVEWQVNPPAGFK-HKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADN 441 S+ P++ S RLQ EL+ + G DN+ W + G+ T++ + L + F YP ++P+V F HP++ G+ICLDIL D WS A V ++ +SI S+L + P +N Sbjct: 25 SAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKF-ETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISS-PLNN 156
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 41/120 (34.17%), Postives = 61/120 (50.83%), Query Frame = 1 Query: 88 RLQKELVEWQVNPPAGFKHKVT-DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADND 444 R+ KE+ +PP G T DNL+ + I + G + Y F L++ P+ YPM P V FL HP++ G ICL L WSPA+ + +V +SI +++ + P DND Sbjct: 6 RIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKI-YHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPN-PDDPLDND 123 The following BLAST results are available for this feature:
BLAST of FC929193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929193 ID=FC929193; Name=FC929193; organism=Citrus clementina; type=EST; length=767bpback to top |