FC929193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBC2_TRIHA (Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.685e-16 Identity = 44/115 (38.26%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +S A RL ++ Q +PPAG + DN+ W + G T + + TF L + F E YP + PQV F+ HP++Y+NG +CLDIL + WSP V++V SI S+L+ Sbjct: 1 MSTAARRRLMRDFKRMQTDPPAGVSASPIPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISQM-FHPNVYANGELCLDILQNRWSPTYDVAAVLTSIQSLLN 114
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.685e-16 Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKHKVT-DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +A+ R+ KEL E Q +PP T +++ W + G + Y+ F + + FP YP + P+V+F HP+I SNG+ICLDIL D WSPA+T+S V +SI S+L+ Sbjct: 1 MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKV-FHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLT 111
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.507e-16 Identity = 54/134 (40.30%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 55 SRKALSKIASN--RLQKELVEWQVNPP----AGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPAD 438 S K +K++++ R+QKEL E ++PP AG K DN+ W + G PG++Y F L + F YP + P+V F H +I S G ICLDIL D+WSPA+T+S V +SI S+L+ PAD Sbjct: 52 SSKTTAKLSTSAKRIQKELAEITLDPPPNCSAGPKG---DNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRI-YHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC----NPAD 177
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.507e-16 Identity = 54/134 (40.30%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 55 SRKALSKIASN--RLQKELVEWQVNPP----AGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPAD 438 S K +K++++ R+QKEL E ++PP AG K DN+ W + G PG++Y F L + F YP + P+V F H +I S G ICLDIL D+WSPA+T+S V +SI S+L+ PAD Sbjct: 52 SSKTTAKLSTSAKRIQKELAEITLDPPPNCSAGPKG---DNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRI-YHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC----NPAD 177
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.507e-16 Identity = 54/134 (40.30%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 55 SRKALSKIASN--RLQKELVEWQVNPP----AGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPAD 438 S K +K++++ R+QKEL E ++PP AG K DN+ W + G PG++Y F L + F YP + P+V F H +I S G ICLDIL D+WSPA+T+S V +SI S+L+ PAD Sbjct: 52 SSKTTAKLSTSAKRIQKELAEITLDPPPNCSAGPKG---DNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRI-YHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC----NPAD 177
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.507e-16 Identity = 49/111 (44.14%), Postives = 63/111 (56.76%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+QKEL + Q +PPA V D+L W + G + Y F L + FP YP + P+V F HP+I SNG ICLDIL WSPA+TVS V +SI S+L Sbjct: 1 MALKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKI-YHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLL 110
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.580e-16 Identity = 47/113 (41.59%), Postives = 66/113 (58.41%), Query Frame = 1 Query: 79 ASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSS 414 +S R+ KEL + +PPA V D+L W + G + YA F L + FP YP + P+V F HP+I S+G+ICLDIL D WSPA+T+S V +SI S+L+ + Sbjct: 3 SSKRIAKELSDLGRDPPASCSAGPVGDDLYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKI-YHPNINSSGNICLDILKDQWSPALTLSKVLLSICSLLTDA 114
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.580e-16 Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +AS R+ KEL + Q +PP V +++ W + G + YA F + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S V +SI S+L+ Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 111
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.580e-16 Identity = 54/134 (40.30%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 55 SRKALSKIASN--RLQKELVEWQVNPP----AGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPAD 438 S K +K++++ R+QKEL E ++PP AG K DN+ W + G PG++Y F L + F YP + P+V F H +I S G ICLDIL D+WSPA+T+S V +SI S+L+ PAD Sbjct: 46 SSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKG---DNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRI-YHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC----NPAD 171
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.580e-16 Identity = 54/134 (40.30%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 55 SRKALSKIASN--RLQKELVEWQVNPP----AGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPAD 438 S K +K++++ R+QKEL E ++PP AG K DN+ W + G PG++Y F L + F YP + P+V F H +I S G ICLDIL D+WSPA+T+S V +SI S+L+ PAD Sbjct: 46 SSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKG---DNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRI-YHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDC----NPAD 171 The following BLAST results are available for this feature:
BLAST of FC929193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929193 ID=FC929193; Name=FC929193; organism=Citrus clementina; type=EST; length=767bpback to top |