FC929193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+ KEL + +PPA V D++ W + G + Y F L + FP YP + P+V F HP+I SNG ICLDIL WSPA+T+S V +SI S+L Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI-YHPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UB2D2_PIG (Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+ KEL + +PPA V D++ W + G + Y F L + FP YP + P+V F HP+I SNG ICLDIL WSPA+T+S V +SI S+L Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI-YHPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+ KEL + +PPA V D++ W + G + Y F L + FP YP + P+V F HP+I SNG ICLDIL WSPA+T+S V +SI S+L Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI-YHPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+ KEL + +PPA V D++ W + G + Y F L + FP YP + P+V F HP+I SNG ICLDIL WSPA+T+S V +SI S+L Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI-YHPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +A R+ KEL + +PPA V D++ W + G + Y F L + FP YP + P+V F HP+I SNG ICLDIL WSPA+T+S V +SI S+L Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI-YHPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 110
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.599e-14 Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTV 420 +S A RL ++ Q + P+G + DN+ W + G T + + TF L + F E YP + P V F+ HP++Y++G +CLDIL + WSP VSS+ SI S+L+ + Sbjct: 1 MSTPAKRRLMRDFKRMQQDAPSGVSASPLPDNVMSWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPSVKFISEM-FHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNI 118
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.312e-14 Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 408 +S A RL ++ Q +PP G V DN+ W + G T + + TF + + F E YP + P V F+ HP++YS+G +CLDIL + WSP V+++ S+ S+L+ Sbjct: 1 MSTTARRRLMRDFKRMQQDPPQGVSASPVADNVLTWNAVIIGPAETPFEDGTFRMVLQFDEQYPNKPPAVKFVSQM-FHPNVYSSGELCLDILQNRWSPTYDVAAILTSVQSLLN 114
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBC_ASFM2 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.629e-13 Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 1 Query: 76 IASNRLQKELVEWQVNPPAGFKHKVT-DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYD--------SWSPAMTVSSVCISILSMLS 408 + S+ L E VNP FK V DNL W + + G P TLY F+ ++ FP YP E P++ F HP+IYS+G +C+ IL+ +WSPA + +V +S++S+L+ Sbjct: 1 MVSSFLLAEYKNLIVNPSEHFKISVNEDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYPYEPPRLTFTSEM-WHPNIYSDGKLCISILHGDNAEEQGMTWSPAQKIDTVLLSVISLLN 119
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.629e-13 Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +S A RL ++ Q +PPAG DN + W + G T + TF+L + F E YP + P V F+ HP+IY++G ICLDIL + WSP V+++ SI S+L Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL 113
BLAST of FC929193 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.629e-13 Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 1 Query: 67 LSKIASNRLQKELVEWQVNPPAGFKHKVTDN-LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 405 +S A RL ++ Q +PPAG DN + W + G T + TF+L + F E YP + P V F+ HP+IY++G ICLDIL + WSP V+++ SI S+L Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL 113 The following BLAST results are available for this feature:
BLAST of FC929193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929193 ID=FC929193; Name=FC929193; organism=Citrus clementina; type=EST; length=767bpback to top |