FC929216

Overview
NameFC929216
Unique NameFC929216
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length429
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9282 contig Ccv1_Contig9282:1..429. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILL3_ORYSJ (IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sativa subsp. japonica GN=ILL3 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.229e-43
Identity = 86/143 (60.14%), Postives = 103/143 (72.03%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDS 429
            V MLLGAAK+LQ  R+   G V LVFQPAEEG  G + VLE G ++ V  IFG+HVD  LP G VASRPGP LAGS  F A I GKGGHAA P H++DPI+A S+ ++SLQ +V+RE DPL   VV+V   +GG AFNVIP+S
Sbjct:  120 VAMLLGAAKLLQSRRDHFNGKVKLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTATINGKGGHAAAPHHAVDPIVAVSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPES 262          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILL4_ORYSJ (IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sativa subsp. japonica GN=ILL4 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.525e-38
Identity = 82/143 (57.34%), Postives = 100/143 (69.93%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDS 429
            V MLL AAK+LQ  R+   G V LVFQPAE G GG H VL+ GVL+    IF +HV  +LP G V SRPGP LAGS  F A I GKGGHAA P  ++DPI+AAS+ ++SLQ +V+RE +PL   VV+V   +GG AFNVIP+S
Sbjct:  116 VAMLLVAAKLLQSRRDHFNGKVKLVFQPAEGGAGGYH-VLKEGVLDDTQTIFAVHVATDLPAGVVGSRPGPFLAGSARFTATITGKGGHAAEPHLAVDPIVAASSAVLSLQQIVARETNPLQGAVVSVTTIKGGEAFNVIPES 257          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILR1_ARATH (IAA-amino acid hydrolase ILR1 OS=Arabidopsis thaliana GN=ILR1 PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 2.933e-37
Identity = 76/143 (53.15%), Postives = 103/143 (72.03%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDS 429
            V MLLGAAK+LQ  +  +KGTV LVFQP EEG  GA+++L+  +L+ ++ I  +HV P++P G + SRPG +LAG+G F   + G+G HAA P  S DP+LAAS+ +V+LQ +VSRE DPL++ VVTV   +GG A NVIP S
Sbjct:  144 VAMLLGAAKLLQTTKHLIKGTVKLVFQPGEEGYAGAYEMLKDEILDDLDGILSVHVFPSIPSGGIGSRPGTVLAGAGLFTVTVHGQGSHAATPHFSKDPVLAASSAVVALQQIVSRELDPLEAGVVTVGYIEGGHAQNVIPQS 286          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: YXEP_BACSU (Uncharacterized hydrolase yxeP OS=Bacillus subtilis GN=yxeP PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 3.243e-36
Identity = 75/139 (53.96%), Postives = 96/139 (69.06%), Query Frame = 1
Query:   10 LLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPD 426
            ++G A +L + R ELKGTV  +FQPAEE   GA KVLEAGVL  V+AIFG+H  P+LP+G +  + GPL+A    FE VI GKGGHA IP +SIDPI AA  +I  LQ +VSR    L + VV++ + Q G ++NVIPD
Sbjct:  107 IIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIVIKGKGGHAGIPNNSIDPIAAAGQIISGLQSVVSRNISSLQNAVVSITRVQAGTSWNVIPD 245          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILL5_ORYSJ (IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sativa subsp. japonica GN=ILL5 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 9.435e-36
Identity = 76/139 (54.68%), Postives = 99/139 (71.22%), Query Frame = 1
Query:    7 MLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIP 423
            MLLGAAK+L E +E++KGTV L+FQPAEEGG GA  +++ GVL+ V AIFG+HVD  +P G +A+  GP  A   F+EA I GK G A  P  ++DPI+AAS VI+SLQ L+SRE DPL SQV++V   +GG   +  P
Sbjct:  130 MLLGAAKLLSERKEQIKGTVRLLFQPAEEGGAGASYMIKDGVLDGVEAIFGMHVDYRMPTGVIAAHAGPTQAAVCFYEAKIEGKTGKAETPHLNVDPIVAASFVILSLQQLISREDDPLHSQVLSVTYVKGGNTIDATP 268          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: YTNL_BACSU (Uncharacterized hydrolase ytnL OS=Bacillus subtilis GN=ytnL PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 6.115e-35
Identity = 70/140 (50.00%), Postives = 99/140 (70.71%), Query Frame = 1
Query:   10 LLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDS 429
            LLGAA +L+E+++ LKG + L+FQPAEE G GA KV+E G L+ ++A+ GLH  P++ +G V  + GPL+A    F+  I GKG HAA+P +  DPI+ AS +IV+LQ +VSR  +PL S ++TV K  GG  +NVIPD+
Sbjct:  137 LLGAAFLLKENQDSLKGKIRLLFQPAEEAGAGATKVIEDGQLDGIDAVIGLHNKPDIAVGTVGLKTGPLMAAVDRFKVEIEGKGAHAALPHNGFDPIIGASQLIVALQTIVSRNVNPLQSAILTVGKINGGSTWNVIPDT 276          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILL6_ARATH (IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana GN=ILL6 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 3.356e-33
Identity = 77/143 (53.85%), Postives = 95/143 (66.43%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDS 429
            VTMLLGAA IL+     LKGTVVL+FQPAEE G GA  ++E G L+ V AIF +HV    P G + SR GPLLAG G F AVI  +    A      + +LAAS+ ++SLQ +VSREA PLDSQVV+V  F GG + +V PD+
Sbjct:  181 VTMLLGAAHILKAREHLLKGTVVLLFQPAEEAGNGAKNMIEDGALDDVEAIFAVHVSHIHPTGVIGSRSGPLLAGCGIFRAVITSEDSRGA-----ANLLLAASSAVISLQGIVSREASPLDSQVVSVTSFDGGHSLDVAPDT 318          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILL6_ORYSJ (IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sativa subsp. japonica GN=ILL6 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.710e-32
Identity = 75/133 (56.39%), Postives = 91/133 (68.42%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQG 399
            V MLLGAAKIL+     L+GTV L+FQPAEE G GA +++E G LE V AIF +HV    P   + SR GPLLAG GFF+AVI G        + S D +LAA++ I+SLQ +VSREADPLDSQVV+VA   G
Sbjct:  204 VAMLLGAAKILKAREHHLRGTVRLLFQPAEESGAGAKRMIEGGALEDVEAIFAVHVSHQHPTSVIGSRTGPLLAGCGFFKAVIHG-------GRRSGDAVLAAASTIISLQSIVSREADPLDSQVVSVAMVNG 329          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILL3_ARATH (IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsis thaliana GN=ILL3 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.010e-29
Identity = 68/141 (48.23%), Postives = 94/141 (66.67%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGA-FNVIP 423
            TMLLGAAK+L + +  L GTV L+FQPAEEGG GA  +++ G L    AIFG+HV   LP GE+A+  GP LA +  F   + GK   ++     +DP+LAAS+ I++LQ ++SRE DPL S V++V   + GG+ F+VIP
Sbjct:  134 TMLLGAAKLLSKRKRMLNGTVRLLFQPAEEGGAGAFHMIKEGALGDSEAIFGMHVHTGLPTGELATISGPALASTSIFSVRMSGKSPASSETYSCVDPVLAASSTILALQLIISREVDPLLSHVLSVTFMKSGGSEFDVIP 274          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: CBPX2_SULSO (Thermostable carboxypeptidase 2 OS=Sulfolobus solfataricus GN=cpsA2 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.973e-26
Identity = 55/144 (38.19%), Postives = 90/144 (62.50%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGG--GAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPD 426
            V MLLG A +L ++++ + G + L+FQPAEE GG  GA  ++EAGV+  V+ +FG+H+  + P G  A+R GP++A    F+ V+ GKGGH + P  +IDPI  +  +  ++  + +R+ DP+   V+++     G   N+IPD
Sbjct:  112 VAMLLGGAYLLVKNKDLISGEIRLIFQPAEEDGGLGGAKPMIEAGVMNGVDYVFGIHISSSYPSGVFATRKGPIMATPDAFKIVVHGKGGHGSAPHETIDPIFISLQIANAIYGITARQIDPVQPFVISITTIHSGTKDNIIPD 255          
The following BLAST results are available for this feature:
BLAST of FC929216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
ILL3_ORYSJ1.229e-4360.14IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sati... [more]
ILL4_ORYSJ4.525e-3857.34IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sati... [more]
ILR1_ARATH2.933e-3753.15IAA-amino acid hydrolase ILR1 OS=Arabidopsis thali... [more]
YXEP_BACSU3.243e-3653.96Uncharacterized hydrolase yxeP OS=Bacillus subtili... [more]
ILL5_ORYSJ9.435e-3654.68IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sati... [more]
YTNL_BACSU6.115e-3550.00Uncharacterized hydrolase ytnL OS=Bacillus subtili... [more]
ILL6_ARATH3.356e-3353.85IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsi... [more]
ILL6_ORYSJ3.710e-3256.39IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sati... [more]
ILL3_ARATH1.010e-2948.23IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsi... [more]
CBPX2_SULSO3.973e-2638.19Thermostable carboxypeptidase 2 OS=Sulfolobus solf... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH3DA08RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DA08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929216 ID=FC929216; Name=FC929216; organism=Citrus clementina; type=EST; length=429bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAATTTCAAGGAG
GTGGTGCATTCAATGTCATTCCAGATTCA
back to top