FC929217

Overview
NameFC929217
Unique NameFC929217
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length812
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.399e-26
Identity = 76/194 (39.18%), Postives = 101/194 (52.06%), Query Frame = 1
Query:  211 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGA-ISGVGLVKAFQKSYYTRYGG-GANELAD----GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAA 771
            G+G LG+A+AFG  +  + Y   GISGGH NPAV+ GL +A K      V Y+VAQ LGA ++   L            GG  AN   +    GYS    L  EII T   +  +  +T          VPV  AP+ IG A+ ++HL +IP+T T +NPARS G A ++    A    WLFW+ P +G AI A
Sbjct:   33 GIGFLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGST-------HGRVPVGFAPVAIGLALTLIHLISIPVTNTSVNPARSTGQA-LFVGGWALQQLWLFWLAPILGGAIGA 218          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.133e-26
Identity = 80/229 (34.93%), Postives = 113/229 (49.34%), Query Frame = 1
Query:   97 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 780
            +A +AEFIA            I Y   T  A         G++ +A A    +FV V   A ISGGH+NPAVT GL +   ++++    Y +AQ LG+     L+K           G    +A G +   G+  EII TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV+      +   W++W GP IG  +A F +
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADA----ALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHG----VAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIGGGLAGFIY 232          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.133e-26
Identity = 83/237 (35.02%), Postives = 118/237 (49.79%), Query Frame = 1
Query:   88 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAG-VGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGV----GLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 780
            S  +A ++EFIA            + +   T      DG     G++ IA A    +FV V   A ISGGH+NPAVT GL +   ++L+    Y +AQCLG+I     V      + T    G +    G S G+    G+  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV+          W++WVGP +G A+A   +
Sbjct:   16 SSLKAYLSEFIATLLFVFAGVGSAVAFAKLTS-----DGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSI-----VACLLLVFVT---NGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---LSQIWIYWVGPLVGGALAGLIY 232          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.092e-26
Identity = 84/231 (36.36%), Postives = 116/231 (50.22%), Query Frame = 1
Query:   97 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVK--AFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 780
            +A +AEFIA            I Y   T    N       G++ IA A    +FV V   A ISGGH+NPAVTFGL +   ++++  + Y +AQ LGA     L+K     K+  T    G +EL        G+  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV       +   W++WVGP IG  +A   +
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYGQLT----NGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHGVAGISELE-------GVVMEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLIGGGLAGLVY 231          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.092e-26
Identity = 80/229 (34.93%), Postives = 113/229 (49.34%), Query Frame = 1
Query:   97 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 780
            +A +AEFIA            I Y   T  A         G++ +A A    +FV V   A ISGGH+NPAVT GL +   ++++    Y +AQ LG+     L+K           G    +A G +   G+  EII TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV+      +   W++W GP IG  +A F +
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADA----ALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHG----VAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIGGGLAGFIY 232          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 6.980e-26
Identity = 77/229 (33.62%), Postives = 114/229 (49.78%), Query Frame = 1
Query:   97 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 780
            +A ++EFIA            + +   T  A         G++ +A A    +FV V   A ISGGH+NPAVT GL +   ++++    Y +AQCLG+I    L+            G    +A G     G+  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV+      +   W++WVGP +G A+A   +
Sbjct:   19 KAYLSEFIATLLFVFAGVGSALAFAKLTSDA----ALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHG----VAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---FSQIWIYWVGPLVGGALAGLIY 232          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.980e-26
Identity = 82/237 (34.60%), Postives = 114/237 (48.10%), Query Frame = 1
Query:   97 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHPFILRAGA 804
            +A +AEFIA            I Y   T    N       G++ IA A    +FV V   A ISGGH+NPAVTFGL +   ++++  V Y VAQ LGA      V      + T           G S   G+  E++ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV       +   W++WVGP +G  +A   +  +   G+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYGQLT----NGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGA-----TVACLLLGFVTHGKAIPTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FAGNWVYWVGPLVGGGLAGLVYGDVFIGGS 239          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.116e-26
Identity = 71/202 (35.15%), Postives = 99/202 (49.01%), Query Frame = 1
Query:  211 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAI-------------SGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQ--WLFWVGPFIGAAIAA 771
            G+G  G+A AFG  +  + Y    ISG H+NPAV+ GL+   +    +   Y+VAQ LGAI             +G  + K F  + Y  +  G      GYS    L  E++ T   +  +  ATD +  A        APL IG A+ ++HL +IP+T T +NPARS G A+       W  Q  WLFW+ P IGA + A
Sbjct:   32 GIGFAGVALAFGLTVVTMAYAIGHISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFASNGYAEHSPG------GYSLLAALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG---GWAVQQLWLFWLAPIIGAVLGA 218          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: AQPZ_SYNY3 (Aquaporin Z OS=Synechocystis sp. (strain PCC 6803) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.191e-25
Identity = 72/200 (36.00%), Postives = 97/200 (48.50%), Query Frame = 1
Query:  211 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELA---------DGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAF-YH 780
            G+G LG+A AFG  +F   Y    ISGGH NPAV+FGL++ ++    +   Y+ AQ LGAI     +    +        G+N LA          GY     L  E + TF+ +  +   TD    A        AP  IG A+ ++HL +IPIT T +NPARS G A+           WLFW+ P  GA +A F YH
Sbjct:   40 GLGYLGVALAFGLTVFTGAYALGHISGGHFNPAVSFGLWMGKRFPGSQLAPYIGAQVLGAIVASLFIFIVAQGGPNFSLDGSNPLATNGFGDHSPQGYGFLAALLIEFVLTFIFLIVILGVTDKTAPAG------FAPAAIGLALTLIHLISIPITNTSVNPARSTGVALFCGNPALIGQLWLFWLAPIAGALLAGFVYH 233          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.555e-25
Identity = 77/240 (32.08%), Postives = 116/240 (48.33%), Query Frame = 1
Query:   73 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHPFIL 792
            EL   SF+RA+ AEF A            +G   +  P         + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA  YM AQ LGA++G  ++ +       R     N L    S G     EI  T   V  +F+  D +R+ +   V     L +GF++ + HL  +  TG G+NPARS   A++      + + W++WVGP IG  + +  + F+L
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGSSLRWAPGP-------LHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223          
The following BLAST results are available for this feature:
BLAST of FC929217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
AQPZ1_AGRT52.399e-2639.18Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
TIP2_TOBAC3.133e-2634.93Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP23_ARATH3.133e-2635.02Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP21_ORYSJ4.092e-2636.36Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP1_TOBAC4.092e-2634.93Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
TIP22_ARATH6.980e-2633.62Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
TIP21_MAIZE6.980e-2634.60Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
AQPZ_CHRVO9.116e-2635.15Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
AQPZ_SYNY31.191e-2536.00Aquaporin Z OS=Synechocystis sp. (strain PCC 6803)... [more]
MIP_HUMAN1.555e-2532.08Lens fiber major intrinsic protein OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DA09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DA09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929217 ID=FC929217; Name=FC929217; organism=Citrus clementina; type=EST; length=812bp
GGCACGAGGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCC
GGAGCCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAG
CCTTGATAGCTGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTC
TTGACTGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGA
CGGCTGTGCCGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGCA
TGATCTTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATT
AACCCGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGT
CCGTGCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGTG
TTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGT
GGGGCCAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCGC
CGAGATCATCGGCACCTTTGTCTTGGTTTACACTGTCTTCTCGGCCACTG
ATCCCAAGAGAAGCGCCAGAGACTCCCACGTTCCCGTTTTGGCACCGCTC
CCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCAATCAC
TGGCACTGGCATTAACCCAGCAAGGAGTCTCGGGGCCGCTGTTATTTACA
ACAAGGACAAGGCTTGGGATGATCAATGGCTCTTCTGGGTTGGACCCTTC
ATTGGTGCAGCAATTGCAGCTTTCTACCACCCATTCATCTTGAGAGCTGG
AGCTGTCAAGGC
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