FC929217

Overview
NameFC929217
Unique NameFC929217
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length812
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.830e-21
Identity = 70/196 (35.71%), Postives = 96/196 (48.98%), Query Frame = 1
Query:  220 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGG-----GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHPFIL 792
            +L IA  F       V  +   SG H NPAVT    +   +SL RA+ Y+ AQ  GA +G  L+      Y    GG     G N + +  STG  +A E++ T  LV  VF++ D +++             IG +V + HL  I  TG  +NPARS G AVI  K   +   W+FWVGP  GA +A+  + FIL
Sbjct:   52 VLQIAITFNLATATAVQISWKTSGAHANPAVTLAYLVGSHISLPRAMAYIAAQLAGATAGAALL------YGVTPGGIRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDGRQTLAS------PAAMIGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGK---FAVHWIFWVGPLTGAVLASLIYNFIL 232          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.153e-20
Identity = 70/196 (35.71%), Postives = 95/196 (48.47%), Query Frame = 1
Query:  220 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGG-----GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHPFIL 792
            +L +A  F       V  +   SG H NPAVT    +   +SL RAV Y+ AQ  GA  G  L+      Y    GG     G N + +  STG  +A E++ T  LV  VF++ D +++             IG +V + HL  I  TG  +NPARS G AVI  K   +   W+FWVGP  GA +A+  + FIL
Sbjct:   52 VLQVAITFNLATATAVQISWKTSGAHANPAVTLAYLVGSHISLPRAVAYIAAQLAGATVGAALL------YGVTPGGVRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDSRQTLGS------PAAMIGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGK---FAVHWIFWVGPLTGAVLASLIYNFIL 232          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.506e-20
Identity = 70/200 (35.00%), Postives = 109/200 (54.50%), Query Frame = 1
Query:  187 AKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAA-EIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 780
            A +V G  GV I  IA A    +   VY +  +SGGH+NPAVTF + +A ++S+  A+ Y  +Q + ++    ++K      +      A E+     TG G +  E +  FVLVYTVF+A+DP+R      +P+ + P+ IGF      LA  P +G  +NPA + G+A++Y   K   +Q ++WVGP +G A AA  +
Sbjct:   51 AGDVSGPFGVLIPAIANALA--LSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEM-----TGFGASVLEGVLAFVLVYTVFTASDPRRG-----LPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFK---NQAVYWVGPLLGGATAALVY 235          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.967e-20
Identity = 65/194 (33.51%), Postives = 95/194 (48.97%), Query Frame = 1
Query:  214 VGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANEL-----ADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 780
            +G+  +A A   ++ V+V     +SGGHINPAVT GL     ++L R+ +Y  AQ LG+     L+ A          GG   +     A G      +A E + TF L++ V++    +R A    V  L PL +G  V    LA  P +G  +NPARS G A+   +   W D W++WVGP IG  +A   +
Sbjct:   53 MGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALT--------GGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRRA----VGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGE---WADHWIYWVGPLIGGPLAGLVY 231          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.665e-19
Identity = 68/214 (31.78%), Postives = 102/214 (47.66%), Query Frame = 1
Query:  172 SQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAG--ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHPFILRAGA 804
            + TD A      AG  +  +A   G  + V V  TAG  ISGGH+NPAVT  L +   V+L R+ +Y+ AQ L + +   L++       T      + LA+G     G+ AE + TF L++ +++   DP++      +P   PL  G  V    +A   ++G  +NPARS G AV       W   W++WVGP  G  +A   +     A A
Sbjct:   39 AMTDGATTKGSTAGGDLTAVA--LGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLAT----PVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKL-----LPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAV---ASGVWTHHWVYWVGPLAGGPLAVLVYECCFMAAA 238          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.175e-19
Identity = 70/205 (34.15%), Postives = 99/205 (48.29%), Query Frame = 1
Query:  172 SQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAG--ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGA---NELADGYSTGVGLAAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIA 768
            + T  A    G AG      A A    + V V  TAG  +SGGH+NPAVT  L +   ++L R+ +Y+ AQ  G+     L++          GG A   + LADG     G+AAE + TF L+  + +   DP+R+A     P   PL  G  V    +A   +TG  +NPARS G A+   +   W   W++WVGP  G  +A
Sbjct:   42 ASTITAGKAAGGAGEAAAVTAAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLT-------GGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAA----PPGTGPLLTGLLVGANTVAGGALTGASMNPARSFGPALATGE---WAHHWVYWVGPLAGGPLA 232          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.840e-19
Identity = 73/243 (30.04%), Postives = 112/243 (46.09%), Query Frame = 1
Query:   61 FDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAG--ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 780
            F+  E+      RA++AE +             +   S   P   +   A +  + IA A    + V    TAG  +SGGH+NPAVT GL +   ++ +RAV+Y+ AQ L + +   L++       T      + L  G S   GL  E+I TF L++  ++   DP+     S V  + PL  G  V    LA    TG  +NPARS G A+       W + W++W+GP +G  +A F +
Sbjct:   12 FEHDEIPDVGCVRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMP-MATLAAVAIAHALAAGVLV----TAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVT----PVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPR-----SQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGD---WTNHWVYWIGPLLGGPLAGFVY 237          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.328e-19
Identity = 71/235 (30.21%), Postives = 108/235 (45.96%), Query Frame = 1
Query:   91 FYRALIAEFIAXXXXXXXXXXXXIGYK-SQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVY-----TVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFY 777
            F R L+AEF              +    + +DP   V  C    + G A+A       +++  +GISG  +NPAVT G     ++ ++  + +++ QC+GA+ G G++KA   ++Y R    A  LA G +   G   E++ T  LV+      V++  DPK S        +APL IG AV          TG  +NPARS G AV       W   +++W GP  G  IA  +
Sbjct:   30 FTRQLLAEFFGTLFVVYIVSGSTLAANFAVSDPIVRV--CLICLVQGFAFA------AIIWSISGISGCQLNPAVTVGCVTTGRMGILNGIAFIIFQCVGALVGAGMMKASLPTFYER-DLSATTLATGVNVARGFFLEMVTTSFLVFVVLGVAVYNEWDPKISR-------VAPLAIGCAVIAGVGFLNLFTGGSLNPARSFGPAVF---SDTWHRHYIYWFGPICGGIIAGLF 245          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.410e-18
Identity = 75/235 (31.91%), Postives = 111/235 (47.23%), Query Frame = 1
Query:   97 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLG---AISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSA----RDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 780
            RA  AEF +            I  +  T P +  D  + +    +A AFG  +F  V+  A +SGGH+NPAVTF   +   +++  A+ Y  +Q LG   A   +  + A Q    TR    A E+  G+  G+    E + TF++VYTV  A DP+       +      L  L +G       LA   +TG  +NPARS G AV+      + +Q ++W GP +GAA+AA  H
Sbjct:   18 RAYFAEFFSTFLFVFIAVGSTISARMLT-PDETSDA-SSLMATAVAQAFG--LFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRI---AVEMT-GFGAGI---LEGVLTFMVVYTVHVAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGH---YSNQAVYWAGPMVGAAVAALVH 238          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: AQP8_HUMAN (Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.102e-18
Identity = 62/193 (32.12%), Postives = 95/193 (49.22%), Query Frame = 1
Query:  196 VDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAF--QKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV-FSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAI 765
            ++     G+L  A A G  + +++     ISGGH NPAV+    L   ++LV  + Y V+Q LG + G  L KA   ++ ++   G     + +       L AEII T +L   V   A + K          LAP  IGFAV +  LA  P++G  +NPAR+ G AV+ N    W+  W++W+GP +   +
Sbjct:   57 IENGTDTGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEKTKG------PLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANH---WNFHWIYWLGPLLAGLL 240          
The following BLAST results are available for this feature:
BLAST of FC929217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
AQP6_MOUSE8.830e-2135.71Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1[more]
AQP6_RAT1.153e-2035.71Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1[more]
TIP51_ARATH1.506e-2035.00Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
TIP43_ORYSJ1.967e-2033.51Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]
TIP43_MAIZE1.665e-1931.78Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
TIP42_ORYSJ2.175e-1934.15Probable aquaporin TIP4-2 OS=Oryza sativa subsp. j... [more]
TIP41_MAIZE2.840e-1930.04Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]
AQPB_DICDI6.328e-1930.21Aquaporin B OS=Dictyostelium discoideum GN=wacA PE... [more]
TIP51_ORYSJ1.410e-1831.91Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
AQP8_HUMAN4.102e-1832.12Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DA09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DA09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929217 ID=FC929217; Name=FC929217; organism=Citrus clementina; type=EST; length=812bp
GGCACGAGGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCC
GGAGCCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAG
CCTTGATAGCTGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTC
TTGACTGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGA
CGGCTGTGCCGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGCA
TGATCTTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATT
AACCCGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGT
CCGTGCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGTG
TTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGT
GGGGCCAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCGC
CGAGATCATCGGCACCTTTGTCTTGGTTTACACTGTCTTCTCGGCCACTG
ATCCCAAGAGAAGCGCCAGAGACTCCCACGTTCCCGTTTTGGCACCGCTC
CCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCAATCAC
TGGCACTGGCATTAACCCAGCAAGGAGTCTCGGGGCCGCTGTTATTTACA
ACAAGGACAAGGCTTGGGATGATCAATGGCTCTTCTGGGTTGGACCCTTC
ATTGGTGCAGCAATTGCAGCTTTCTACCACCCATTCATCTTGAGAGCTGG
AGCTGTCAAGGC
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