FC929220

Overview
NameFC929220
Unique NameFC929220
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length466
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILL3_ORYSJ (IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sativa subsp. japonica GN=ILL3 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 6.681e-47
Identity = 91/154 (59.09%), Postives = 111/154 (72.08%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            V MLLGAAK+LQ  R+   G V LVFQPAEEG  G + VLE G ++ V  IFG+HVD  LP G VASRPGP LAGS  F A I GKGGHAA P H++DPI+A S+ ++SLQ +V+RE DPL   VV+V   +GG AFNVIP+SV +GGT R+ +
Sbjct:  120 VAMLLGAAKLLQSRRDHFNGKVKLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTATINGKGGHAAAPHHAVDPIVAVSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPESVTLGGTLRSMT 273          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILL4_ORYSJ (IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sativa subsp. japonica GN=ILL4 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 2.459e-41
Identity = 87/154 (56.49%), Postives = 108/154 (70.13%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            V MLL AAK+LQ  R+   G V LVFQPAE G GG H VL+ GVL+    IF +HV  +LP G V SRPGP LAGS  F A I GKGGHAA P  ++DPI+AAS+ ++SLQ +V+RE +PL   VV+V   +GG AFNVIP+SV +GGT R+ +
Sbjct:  116 VAMLLVAAKLLQSRRDHFNGKVKLVFQPAEGGAGGYH-VLKEGVLDDTQTIFAVHVATDLPAGVVGSRPGPFLAGSARFTATITGKGGHAAEPHLAVDPIVAASSAVLSLQQIVARETNPLQGAVVSVTTIKGGEAFNVIPESVTLGGTLRSMT 268          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILR1_ARATH (IAA-amino acid hydrolase ILR1 OS=Arabidopsis thaliana GN=ILR1 PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 9.345e-41
Identity = 82/154 (53.25%), Postives = 110/154 (71.43%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            V MLLGAAK+LQ  +  +KGTV LVFQP EEG  GA+++L+  +L+ ++ I  +HV P++P G + SRPG +LAG+G F   + G+G HAA P  S DP+LAAS+ +V+LQ +VSRE DPL++ VVTV   +GG A NVIP S   GGTFR+ S
Sbjct:  144 VAMLLGAAKLLQTTKHLIKGTVKLVFQPGEEGYAGAYEMLKDEILDDLDGILSVHVFPSIPSGGIGSRPGTVLAGAGLFTVTVHGQGSHAATPHFSKDPVLAASSAVVALQQIVSRELDPLEAGVVTVGYIEGGHAQNVIPQSAKFGGTFRSLS 297          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILL6_ARATH (IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana GN=ILL6 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 8.746e-39
Identity = 86/154 (55.84%), Postives = 106/154 (68.83%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            VTMLLGAA IL+     LKGTVVL+FQPAEE G GA  ++E G L+ V AIF +HV    P G + SR GPLLAG G F AVI  +    A      + +LAAS+ ++SLQ +VSREA PLDSQVV+V  F GG + +V PD+V++GGTFRAFS
Sbjct:  181 VTMLLGAAHILKAREHLLKGTVVLLFQPAEEAGNGAKNMIEDGALDDVEAIFAVHVSHIHPTGVIGSRSGPLLAGCGIFRAVITSEDSRGA-----ANLLLAASSAVISLQGIVSREASPLDSQVVSVTSFDGGHSLDVAPDTVVLGGTFRAFS 329          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: YXEP_BACSU (Uncharacterized hydrolase yxeP OS=Bacillus subtilis GN=yxeP PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 1.142e-38
Identity = 80/152 (52.63%), Postives = 102/152 (67.11%), Query Frame = 1
Query:   10 LLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 465
            ++G A +L + R ELKGTV  +FQPAEE   GA KVLEAGVL  V+AIFG+H  P+LP+G +  + GPL+A    FE VI GKGGHA IP +SIDPI AA  +I  LQ +VSR    L + VV++ + Q G ++NVIPD   + GT R F K
Sbjct:  107 IIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIVIKGKGGHAGIPNNSIDPIAAAGQIISGLQSVVSRNISSLQNAVVSITRVQAGTSWNVIPDQAEMEGTVRTFQK 258          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: YTNL_BACSU (Uncharacterized hydrolase ytnL OS=Bacillus subtilis GN=ytnL PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 4.341e-38
Identity = 76/150 (50.67%), Postives = 106/150 (70.67%), Query Frame = 1
Query:   10 LLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAF 459
            LLGAA +L+E+++ LKG + L+FQPAEE G GA KV+E G L+ ++A+ GLH  P++ +G V  + GPL+A    F+  I GKG HAA+P +  DPI+ AS +IV+LQ +VSR  +PL S ++TV K  GG  +NVIPD+V+I GT R F
Sbjct:  137 LLGAAFLLKENQDSLKGKIRLLFQPAEEAGAGATKVIEDGQLDGIDAVIGLHNKPDIAVGTVGLKTGPLMAAVDRFKVEIEGKGAHAALPHNGFDPIIGASQLIVALQTIVSRNVNPLQSAILTVGKINGGSTWNVIPDTVVIEGTVRTF 286          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILL5_ORYSJ (IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sativa subsp. japonica GN=ILL5 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 4.341e-38
Identity = 80/152 (52.63%), Postives = 106/152 (69.74%), Query Frame = 1
Query:    7 MLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            MLLGAAK+L E +E++KGTV L+FQPAEEGG GA  +++ GVL+ V AIFG+HVD  +P G +A+  GP  A   F+EA I GK G A  P  ++DPI+AAS VI+SLQ L+SRE DPL SQV++V   +GG   +  P  +  GGT R+ +
Sbjct:  130 MLLGAAKLLSERKEQIKGTVRLLFQPAEEGGAGASYMIKDGVLDGVEAIFGMHVDYRMPTGVIAAHAGPTQAAVCFYEAKIEGKTGKAETPHLNVDPIVAASFVILSLQQLISREDDPLHSQVLSVTYVKGGNTIDATPPVIEFGGTLRSLT 281          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILL6_ORYSJ (IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sativa subsp. japonica GN=ILL6 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.707e-34
Identity = 84/162 (51.85%), Postives = 103/162 (63.58%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGG--------GAFNVIPDSVLIGGTFRAFS 462
            V MLLGAAKIL+     L+GTV L+FQPAEE G GA +++E G LE V AIF +HV    P   + SR GPLLAG GFF+AVI G        + S D +LAA++ I+SLQ +VSREADPLDSQVV+VA   G          A     +  ++GGTFRAFS
Sbjct:  204 VAMLLGAAKILKAREHHLRGTVRLLFQPAEESGAGAKRMIEGGALEDVEAIFAVHVSHQHPTSVIGSRTGPLLAGCGFFKAVIHG-------GRRSGDAVLAAASTIISLQSIVSREADPLDSQVVSVAMVNGSDHPAATARAAAAEEEEEFVLGGTFRAFS 358          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILL3_ARATH (IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsis thaliana GN=ILL3 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 4.648e-32
Identity = 73/154 (47.40%), Postives = 101/154 (65.58%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGA-FNVIPDSVLIGGTFRAFS 462
            TMLLGAAK+L + +  L GTV L+FQPAEEGG GA  +++ G L    AIFG+HV   LP GE+A+  GP LA +  F   + GK   ++     +DP+LAAS+ I++LQ ++SRE DPL S V++V   + GG+ F+VIP  V  GGT R+ +
Sbjct:  134 TMLLGAAKLLSKRKRMLNGTVRLLFQPAEEGGAGAFHMIKEGALGDSEAIFGMHVHTGLPTGELATISGPALASTSIFSVRMSGKSPASSETYSCVDPVLAASSTILALQLIISREVDPLLSHVLSVTFMKSGGSEFDVIPAYVEFGGTLRSLT 287          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: YHAA_BACSU (Putative amidohydrolase yhaA OS=Bacillus subtilis GN=yhaA PE=3 SV=3)

HSP 1 Score: 124.02 bits (310), Expect = 3.118e-28
Identity = 63/153 (41.18%), Postives = 93/153 (60.78%), Query Frame = 1
Query:   10 LLGAAKILQEHREELKGTVVLVFQPAEEG-GGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 465
            LL  AK+L ++R ELKGT V++ Q AEE   GGA  +++ G LE  + IFG H+    P+G +  RPG ++A +  F   + GKGGH A P  + D +L  S ++ SLQH+VSR+ +P+ S V++   F     FNVI D  ++ GT R+F +
Sbjct:  117 LLAVAKVLHQNRHELKGTFVMIHQHAEEYYPGGAKPMIDDGCLENTDVIFGTHLWATEPLGTILCRPGAVMAAADRFTIKVFGKGGHGAHPHDTKDAVLIGSQIVSSLQHIVSRKVNPIQSAVISTGSFIADNPFNVIADQAVLIGTARSFDE 269          
The following BLAST results are available for this feature:
BLAST of FC929220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
ILL3_ORYSJ6.681e-4759.09IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sati... [more]
ILL4_ORYSJ2.459e-4156.49IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sati... [more]
ILR1_ARATH9.345e-4153.25IAA-amino acid hydrolase ILR1 OS=Arabidopsis thali... [more]
ILL6_ARATH8.746e-3955.84IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsi... [more]
YXEP_BACSU1.142e-3852.63Uncharacterized hydrolase yxeP OS=Bacillus subtili... [more]
YTNL_BACSU4.341e-3850.67Uncharacterized hydrolase ytnL OS=Bacillus subtili... [more]
ILL5_ORYSJ4.341e-3852.63IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sati... [more]
ILL6_ORYSJ1.707e-3451.85IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sati... [more]
ILL3_ARATH4.648e-3247.40IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsi... [more]
YHAA_BACSU3.118e-2841.18Putative amidohydrolase yhaA OS=Bacillus subtilis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DA12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929220 ID=FC929220; Name=FC929220; organism=Citrus clementina; type=EST; length=466bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAATTTCAAGGAG
GTGGTGCATTCAATGTCATTCCAGATTCAGTATTAATTGGAGGCACTTTC
CGGGCCTTTTCAAAGG
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