FC929220

Overview
NameFC929220
Unique NameFC929220
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length466
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: AMHX_BACSU (Amidohydrolase amhX OS=Bacillus subtilis GN=amhX PE=3 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 2.563e-14
Identity = 52/153 (33.99%), Postives = 75/153 (49.02%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGG-AFNVIPDSVLIGGTFRA 456
            +TM LG   +L++  E  KGT+  +FQPAEE GGGA K++E GVL+ ++ ++G+HV P          P  L   S   E  I G+  H A P    + I  A+ ++  L  +     DP     V + K Q GG + N+IP         RA
Sbjct:   96 MTMALGTLMLLKKQPELPKGTIRFIFQPAEEKGGGALKMIEEGVLDDIDYLYGVHVRPIQETQNGRCAPSILHGSSQHIEGTIIGEEAHGARPHLGKNSIEIAAFLVHKLGLI---HIDPQIPHTVKMTKLQAGGESSNIIPGKASFSLDLRA 245          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: Y1398_STAAM (Uncharacterized hydrolase SAV1398 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV1398 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.833e-13
Identity = 40/139 (28.78%), Postives = 70/139 (50.36%), Query Frame = 1
Query:   49 ELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAF 459
            +L   VV +FQPAEE GGGA+++++AG  +K  + A+FG+HV+P    G    R   + A +  +   + G   H A  + +     A  +V+  +  +     + L   +V +  F+ G A N +P +  + GT R +
Sbjct:  116 QLPQNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEYRFFLTGLSSHVADKEQAHSCGEALQHVLTQISQIQQFHLNGLKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTY 254          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: Y1352_STAS1 (Uncharacterized hydrolase SSP1352 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1352 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.833e-13
Identity = 42/139 (30.22%), Postives = 68/139 (48.92%), Query Frame = 1
Query:   49 ELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAF 459
            EL   +V +FQPAEE GGGA++++ AG  EK  + A+FG+HV P    G V  R   + A +  +   + G   H A  +       A  +V+  +  +     + L   +V +  F+ G A N +P +  + GT R +
Sbjct:  116 ELPQNIVFIFQPAEETGGGANRLIRAGAFEKYPIEAVFGIHVMPFENEGRVVIRDEEITASATEYRFYLHGLSSHVADKEQGHSCGEALQHVLTQVGQIQQYHLNGLKRNIVHMGHFEAGEAINTVPSNGYLEGTIRTY 254          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: Y1230_STAAN (Uncharacterized hydrolase SA1230 OS=Staphylococcus aureus (strain N315) GN=SA1230 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.833e-13
Identity = 40/139 (28.78%), Postives = 70/139 (50.36%), Query Frame = 1
Query:   49 ELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAF 459
            +L   VV +FQPAEE GGGA+++++AG  +K  + A+FG+HV+P    G    R   + A +  +   + G   H A  + +     A  +V+  +  +     + L   +V +  F+ G A N +P +  + GT R +
Sbjct:  116 QLPQNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEYRFFLTGLSSHVADKEQAHSCGEALQHVLTQISQIQQFHLNGLKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTY 254          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: Y1433_STAAC (Uncharacterized hydrolase SACOL1433 OS=Staphylococcus aureus (strain COL) GN=SACOL1433 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.700e-13
Identity = 40/139 (28.78%), Postives = 69/139 (49.64%), Query Frame = 1
Query:   49 ELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAF 459
            +L   VV +FQPAEE GGGA+++++AG  +K  + A+FG+HV+P    G    R   + A +  +   + G   H A  +       A  +V+  +  +     + L   +V +  F+ G A N +P +  + GT R +
Sbjct:  116 QLPQNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEYRFFLTGLSSHVADKEQGHSCGEALQHVLTQISQIQQFHLNGLKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTY 254          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: Y1410_STAAR (Uncharacterized hydrolase SAR1410 OS=Staphylococcus aureus (strain MRSA252) GN=SAR1410 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.700e-13
Identity = 40/139 (28.78%), Postives = 69/139 (49.64%), Query Frame = 1
Query:   49 ELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAF 459
            +L   VV +FQPAEE GGGA+++++AG  +K  + A+FG+HV+P    G    R   + A +  +   + G   H A  +       A  +V+  +  +     + L   +V +  F+ G A N +P +  + GT R +
Sbjct:  116 QLPQNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEYRFFLTGLSSHVADKEQGHSCGEALQHVLTQISQIQQFHLNGLKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTY 254          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: Y1399_STAA8 (Uncharacterized hydrolase SAOUHSC_01399 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_01399 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.700e-13
Identity = 40/139 (28.78%), Postives = 69/139 (49.64%), Query Frame = 1
Query:   49 ELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAF 459
            +L   VV +FQPAEE GGGA+++++AG  +K  + A+FG+HV+P    G    R   + A +  +   + G   H A  +       A  +V+  +  +     + L   +V +  F+ G A N +P +  + GT R +
Sbjct:  116 QLPQNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEYRFFLTGLSSHVADKEQGHSCGEALQHVLTQISQIQQFHLNGLKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTY 254          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: Y1339_STAAS (Uncharacterized hydrolase SAS1339 OS=Staphylococcus aureus (strain MSSA476) GN=SAS1339 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.700e-13
Identity = 40/139 (28.78%), Postives = 69/139 (49.64%), Query Frame = 1
Query:   49 ELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAF 459
            +L   VV +FQPAEE GGGA+++++AG  +K  + A+FG+HV+P    G    R   + A +  +   + G   H A  +       A  +V+  +  +     + L   +V +  F+ G A N +P +  + GT R +
Sbjct:  116 QLPQNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEYRFFLTGLSSHVADKEQGHSCGEALQHVLTQISQIQQFHLNGLKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTY 254          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: Y1291_STAA3 (Uncharacterized hydrolase SAUSA300_1291 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_1291 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.700e-13
Identity = 40/139 (28.78%), Postives = 69/139 (49.64%), Query Frame = 1
Query:   49 ELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAF 459
            +L   VV +FQPAEE GGGA+++++AG  +K  + A+FG+HV+P    G    R   + A +  +   + G   H A  +       A  +V+  +  +     + L   +V +  F+ G A N +P +  + GT R +
Sbjct:  116 QLPQNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEYRFFLTGLSSHVADKEQGHSCGEALQHVLTQISQIQQFHLNGLKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTY 254          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: Y1286_STAAW (Uncharacterized hydrolase MW1286 OS=Staphylococcus aureus (strain MW2) GN=MW1286 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.700e-13
Identity = 40/139 (28.78%), Postives = 69/139 (49.64%), Query Frame = 1
Query:   49 ELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAF 459
            +L   VV +FQPAEE GGGA+++++AG  +K  + A+FG+HV+P    G    R   + A +  +   + G   H A  +       A  +V+  +  +     + L   +V +  F+ G A N +P +  + GT R +
Sbjct:  116 QLPQNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGIHVNPFADEGIAVIRDEEITASATEYRFFLTGLSSHVADKEQGHSCGEALQHVLTQISQIQQFHLNGLKRNIVHIGHFKAGEAINTVPSNGYLEGTIRTY 254          
The following BLAST results are available for this feature:
BLAST of FC929220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
AMHX_BACSU2.563e-1433.99Amidohydrolase amhX OS=Bacillus subtilis GN=amhX P... [more]
Y1398_STAAM2.833e-1328.78Uncharacterized hydrolase SAV1398 OS=Staphylococcu... [more]
Y1352_STAS12.833e-1330.22Uncharacterized hydrolase SSP1352 OS=Staphylococcu... [more]
Y1230_STAAN2.833e-1328.78Uncharacterized hydrolase SA1230 OS=Staphylococcus... [more]
Y1433_STAAC3.700e-1328.78Uncharacterized hydrolase SACOL1433 OS=Staphylococ... [more]
Y1410_STAAR3.700e-1328.78Uncharacterized hydrolase SAR1410 OS=Staphylococcu... [more]
Y1399_STAA83.700e-1328.78Uncharacterized hydrolase SAOUHSC_01399 OS=Staphyl... [more]
Y1339_STAAS3.700e-1328.78Uncharacterized hydrolase SAS1339 OS=Staphylococcu... [more]
Y1291_STAA33.700e-1328.78Uncharacterized hydrolase SAUSA300_1291 OS=Staphyl... [more]
Y1286_STAAW3.700e-1328.78Uncharacterized hydrolase MW1286 OS=Staphylococcus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DA12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929220 ID=FC929220; Name=FC929220; organism=Citrus clementina; type=EST; length=466bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAATTTCAAGGAG
GTGGTGCATTCAATGTCATTCCAGATTCAGTATTAATTGGAGGCACTTTC
CGGGCCTTTTCAAAGG
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