FC929220

Overview
NameFC929220
Unique NameFC929220
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length466
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_BACC1 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain ATCC 10987) GN=dapL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.448e-25
Identity = 60/141 (42.55%), Postives = 86/141 (60.99%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ K  GG   N+I +   + GT R  S
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLS 253          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_BACC0 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain AH820) GN=dapL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.448e-25
Identity = 60/141 (42.55%), Postives = 86/141 (60.99%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ K  GG   N+I +   + GT R  S
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLS 253          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_BACAN (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus anthracis GN=dapL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.448e-25
Identity = 60/141 (42.55%), Postives = 86/141 (60.99%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ K  GG   N+I +   + GT R  S
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLS 253          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_BACAH (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus thuringiensis (strain Al Hakam) GN=dapL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.448e-25
Identity = 60/141 (42.55%), Postives = 86/141 (60.99%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ K  GG   N+I +   + GT R  S
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLS 253          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_BACAC (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=dapL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.448e-25
Identity = 60/141 (42.55%), Postives = 86/141 (60.99%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ K  GG   N+I +   + GT R  S
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLS 253          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_BACAA (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus anthracis (strain A0248) GN=dapL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.448e-25
Identity = 60/141 (42.55%), Postives = 86/141 (60.99%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ K  GG   N+I +   + GT R  S
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLS 253          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_OENOB (Putative N-acetyldiaminopimelate deacetylase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=dapL PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.471e-25
Identity = 62/158 (39.24%), Postives = 92/158 (58.23%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKV---NAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 465
            +T+ LG      +H+   K  +++ FQPAEE   G  +  +AG  +     +  + LHV+P LP G++ASR G L AGS        GK GHAA PQ++ D I+AA+N + ++Q +VSR  DP++  VVT+ KF  G A N+I     I GT R+F++
Sbjct:  104 MTVALGILSYFAKHQP--KDNLLVFFQPAEENEFGGKRFYDAGGFQGEYLPDEFYALHVNPQLPAGQIASRKGTLFAGSNELRISFIGKSGHAAYPQNAKDSIVAAANFVTNVQTVVSRNVDPIEGGVVTIGKFNAGKAMNIIAGKADIEGTIRSFTQ 259          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_BACA2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus amyloliquefaciens (strain FZB42) GN=dapL PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.471e-25
Identity = 63/157 (40.13%), Postives = 93/157 (59.24%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 465
            +T+ LG       H   +K  ++ +FQPAEEG GGA  +LE+ VL+K   + I  LH+ P LP+G ++++ G L A +      + GKGGHAA P  + D ++AAS ++  LQ ++SR  DPLDS V+TV    GG A N+I +   + GT R  S+
Sbjct:  100 MTIALGIIDHFVHH--PVKHDLLFLFQPAEEGPGGAEPMLESDVLKKWTPDLITALHIAPELPVGTISTKSGLLFANTSELVIDLEGKGGHAAYPHTADDMVVAASTLVTQLQTVISRNTDPLDSAVITVGTITGGTAQNIIAEHAHLEGTIRTLSE 254          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_BACCN (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dapL PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 3.227e-25
Identity = 60/152 (39.47%), Postives = 89/152 (58.55%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            +G   +     + +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ K  GG   N+I +   + GT R  S
Sbjct:  102 IGLGLLTATVNDRIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNMILGLHIAPEYPVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHMANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLS 253          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_BREBN (Putative N-acetyldiaminopimelate deacetylase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=dapL PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 4.214e-25
Identity = 59/156 (37.82%), Postives = 91/156 (58.33%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            + + LG      EH   +   ++ +FQPAEEG GGA  ++E+      + + IF LH+ P  P+G++A++PG L A +      + GKGGHAA P  + D ++A S+++  LQ ++SR  DPLDS VVT+ K + G   N+I +   + GT R FS
Sbjct:  100 MAIALGLLTHFTEH--SIADDLLFLFQPAEEGPGGAWPMMESEEFAEWRPDCIFALHIAPEYPVGQIATKPGILFANTSELYIDLVGKGGHAAFPHKANDMVVAGSHLVTQLQSIISRNIDPLDSAVVTIGKLESGTKQNIIAEKSRLEGTIRTFS 253          
The following BLAST results are available for this feature:
BLAST of FC929220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
DAPL_BACC11.448e-2542.55Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC01.448e-2542.55Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACAN1.448e-2542.55Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACAH1.448e-2542.55Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACAC1.448e-2542.55Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACAA1.448e-2542.55Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_OENOB2.471e-2539.24Putative N-acetyldiaminopimelate deacetylase OS=Oe... [more]
DAPL_BACA22.471e-2540.13Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACCN3.227e-2539.47Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BREBN4.214e-2537.82Putative N-acetyldiaminopimelate deacetylase OS=Br... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DA12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929220 ID=FC929220; Name=FC929220; organism=Citrus clementina; type=EST; length=466bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAATTTCAAGGAG
GTGGTGCATTCAATGTCATTCCAGATTCAGTATTAATTGGAGGCACTTTC
CGGGCCTTTTCAAAGG
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