FC929220

Overview
NameFC929220
Unique NameFC929220
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length466
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_STRP4 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=dapL PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.832e-20
Identity = 56/157 (35.67%), Postives = 86/157 (54.78%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 465
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++ AS  +  +Q +VSR  +P++  VVT   FQ G   NVI D+  + GT RA ++
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVVASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQ 254          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_STRZJ (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain JJA) GN=dapL PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.082e-20
Identity = 56/157 (35.67%), Postives = 86/157 (54.78%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 465
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT   FQ G   NVI D+  + GT RA ++
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQ 254          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_STRR6 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=dapL PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.082e-20
Identity = 56/157 (35.67%), Postives = 86/157 (54.78%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 465
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT   FQ G   NVI D+  + GT RA ++
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQ 254          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_STRPJ (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=dapL PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.082e-20
Identity = 56/157 (35.67%), Postives = 86/157 (54.78%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 465
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT   FQ G   NVI D+  + GT RA ++
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQ 254          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_STRPI (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=dapL PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.082e-20
Identity = 56/157 (35.67%), Postives = 86/157 (54.78%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 465
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT   FQ G   NVI D+  + GT RA ++
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQ 254          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_STRP2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=dapL PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.082e-20
Identity = 56/157 (35.67%), Postives = 86/157 (54.78%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 465
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT   FQ G   NVI D+  + GT RA ++
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQ 254          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_LACCB (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus casei (strain BL23) GN=dapL PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 5.331e-20
Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 465
            +T+ LG      EH+   K  ++  FQPAEE   G     + G       ++  +GLH  P+LP G +++R G L AG+      + GK GHAA+PQ++ D I+AA++ I  +Q +V+R   P DS V+T    + G   NVI     + GT R F++
Sbjct:  103 MTVALGILSYFAEHQP--KDNLIFFFQPAEESKNGGKLAYDMGAFTGDWHIDEFYGLHDRPDLPAGTISTRLGTLFAGTTEINVDLIGKSGHAALPQNANDMIVAAASFISQIQTVVARNVGPTDSAVITFGLMRAGTIRNVIAGRAHLEGTLRGFTQ 258          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_LACC3 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus casei (strain ATCC 334) GN=dapL PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 5.331e-20
Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 465
            +T+ LG      EH+   K  ++  FQPAEE   G     + G       ++  +GLH  P+LP G +++R G L AG+      + GK GHAA+PQ++ D I+AA++ I  +Q +V+R   P DS V+T    + G   NVI     + GT R F++
Sbjct:  103 MTVALGILSYFAEHQP--KDNLIFFFQPAEESKNGGKLAYDMGAFTGDWHIDEFYGLHDRPDLPAGTISTRLGTLFAGTTEINVDLIGKSGHAALPQNANDMIVAAASFISQIQTVVARNVGPTDSAVITFGLMRAGTIRNVIAGRAHLEGTLRGFTQ 258          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_STRSY (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus suis (strain 05ZYH33) GN=dapL PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.188e-19
Identity = 54/157 (34.39%), Postives = 87/157 (55.41%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 465
            +T+ LG  + + E  ++ +  ++ +FQPAEE   G   + EAG       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  DP++  VVT      G   NVI ++  + GT RA ++
Sbjct:  100 MTIALGLLEKMAE--QQPRNNLLFLFQPAEENLAGGMLMYEAGAFGDWLPDEFYGLHVRPDLKVGQMATNRATLFAGTCEVKIRFTGKGGHAAFPYTANDALVAASYFVTQVQSVVSRNVDPIEGAVVTFGSMHAGTTNNVIAETAFLHGTIRALTQ 254          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: DAPL_STRS2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus suis (strain 98HAH33) GN=dapL PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.188e-19
Identity = 54/157 (34.39%), Postives = 87/157 (55.41%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 465
            +T+ LG  + + E  ++ +  ++ +FQPAEE   G   + EAG       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  DP++  VVT      G   NVI ++  + GT RA ++
Sbjct:  100 MTIALGLLEKMAE--QQPRNNLLFLFQPAEENLAGGMLMYEAGAFGDWLPDEFYGLHVRPDLKVGQMATNRATLFAGTCEVKIRFTGKGGHAAFPYTANDALVAASYFVTQVQSVVSRNVDPIEGAVVTFGSMHAGTTNNVIAETAFLHGTIRALTQ 254          
The following BLAST results are available for this feature:
BLAST of FC929220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
DAPL_STRP41.832e-2035.67Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRZJ4.082e-2035.67Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRR64.082e-2035.67Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRPJ4.082e-2035.67Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRPI4.082e-2035.67Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRP24.082e-2035.67Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_LACCB5.331e-2034.81Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACC35.331e-2034.81Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_STRSY1.188e-1934.39Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRS21.188e-1934.39Putative N-acetyldiaminopimelate deacetylase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DA12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929220 ID=FC929220; Name=FC929220; organism=Citrus clementina; type=EST; length=466bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAATTTCAAGGAG
GTGGTGCATTCAATGTCATTCCAGATTCAGTATTAATTGGAGGCACTTTC
CGGGCCTTTTCAAAGG
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