FC929238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929238 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.073e-18 Identity = 44/54 (81.48%), Postives = 47/54 (87.04%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQESFNNVKQWL EIDRYAS+NVNKLLVGNK DLT KVV + TAK Y Sbjct: 89 VVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEY 142
BLAST of FC929238 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18 Identity = 43/54 (79.63%), Postives = 47/54 (87.04%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQESFNNVKQWL EIDRYAS+NVNKLLVGNK DLT KVV Y+ AK + Sbjct: 86 VVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSDLTGKKVVDYQAAKAF 139
BLAST of FC929238 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.549e-17 Identity = 42/54 (77.78%), Postives = 48/54 (88.89%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQESFNNVKQWL+EIDRYA +NVNKLLVGNK DLTA +VVS + AK + Sbjct: 86 VVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEF 139
BLAST of FC929238 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 41/54 (75.93%), Postives = 45/54 (83.33%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT KVV TAK + Sbjct: 86 VVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEF 139
BLAST of FC929238 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 41/54 (75.93%), Postives = 45/54 (83.33%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT KVV TAK + Sbjct: 86 VVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEF 139
BLAST of FC929238 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 41/54 (75.93%), Postives = 45/54 (83.33%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT KVV TAK + Sbjct: 86 VVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEF 139
BLAST of FC929238 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 41/54 (75.93%), Postives = 45/54 (83.33%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT KVV TAK + Sbjct: 86 VVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEF 139
BLAST of FC929238 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 41/54 (75.93%), Postives = 45/54 (83.33%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT KVV TAK + Sbjct: 86 VVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEF 139
BLAST of FC929238 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 41/54 (75.93%), Postives = 45/54 (83.33%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT KVV TAK + Sbjct: 86 VVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEF 139
BLAST of FC929238 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16 Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 IVYD+TD ESFNNVKQWL+EIDRYA+D+V KLLVGNKCDL N+ V A+ Y Sbjct: 86 IVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAY 139 The following BLAST results are available for this feature:
BLAST of FC929238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929238 ID=FC929238; Name=FC929238; organism=Citrus clementina; type=EST; length=690bpback to top |