FC929241

Overview
NameFC929241
Unique NameFC929241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length602
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.453e-15
Identity = 47/117 (40.17%), Postives = 62/117 (52.99%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP-DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMK-IDDLDFEATPGLTQHKKKPL 346
            E   + GY I A T V +N  AI RD   W     EF PER   S  D  G+NF++IPFGAGRR+C G  +   +  + LANL+ +FDW++  G    D  D     G+   +K PL
Sbjct:  374 EDVKLKGYDITAGTQVIINAWAIQRDTATWGSDAQEFRPERHFDSTWDFVGRNFKYIPFGAGRRLCPGIGLGSVMASVTLANLVKRFDWRVEDGPSGYDKPDLVEGAGIDVCRKFPL 490          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.898e-15
Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 2
Query:    5 KCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV------GSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKM--PHG--MKIDD--LDFEATPGLT 325
            +C ++ Y IP  + +FVNV +IGR+ + WD P EF PERF+         +D+ G +F+ +PFG+GRR+C G  +AM  V   L  ++  FD+ +  P G  +K DD  ++ +  PGLT
Sbjct:  379 ECTVENYVIPEDSLLFVNVWSIGRNPKFWDNPLEFRPERFLKLEGDSSGVVDVRGSHFQLLPFGSGRRMCPGVSLAMQEVPALLGAIIQCFDFHVVGPKGEILKGDDIVINVDERPGLT 497          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.898e-15
Identity = 46/120 (38.33%), Postives = 64/120 (53.33%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSN--IDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            E C I GY +   T +  N+  I  D  VW  P EF PERF+ ++  IDM GQ+F+ +PFG GRRIC G  + +  V L LA+ L+ F+   P     + LD       T  K  PL+++
Sbjct:  393 EDCTIGGYTVKKGTRLITNLSKIHTDHNVWSNPLEFKPERFLTTDKDIDMKGQHFQLLPFGGGRRICPGINLGLQTVRLTLASFLHSFEILNP---STEPLDMTEVFRATNTKATPLEIL 509          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C89A2_ARATH (Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.237e-15
Identity = 49/125 (39.20%), Postives = 70/125 (56.00%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSN--IDM-GGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKID---DLDFEATPGLTQHKKKPLKLVA 358
            E  V+ GY +P   T+   V  IGRD   W++P  F PERF+G    +D+ G +  + +PFGAGRRIC G  +AM  +E  +AN++ +F WK   G ++D    L+F      T   K PLK +A
Sbjct:  382 EDTVLGGYKVPKNGTINFMVAEIGRDPVEWEEPMAFKPERFMGEEEAVDLTGSRGIKMMPFGAGRRICPGIGLAMLHLEYYVANMVREFQWKEVQGHEVDLTEKLEF------TVVMKHPLKALA 500          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.227e-15
Identity = 41/88 (46.59%), Postives = 53/88 (60.23%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNID----MGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDW 265
            IDGYH+PA TT  VN  AI RD  VW  P EF+PERFV +  D    + G +    PFG+GRR C G  +    V   +A+LL++F+W
Sbjct:  403 IDGYHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEW 490          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 9.417e-15
Identity = 42/115 (36.52%), Postives = 68/115 (59.13%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERF---VGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLK 349
            I GY +P  T V VN  AI RD ++W++P++F P+R+    GS+  +    ++ +PFG GRR C G+ +   IV LAL +L+  F+W+    +K +++D   + GL   K  PL+
Sbjct:  379 IGGYDVPRDTIVMVNAWAIHRDPEIWEEPEKFNPDRYNDGCGSDYYV----YKLMPFGNGRRTCPGAGLGQRIVTLALGSLIQCFEWE---NVKGEEMDMSESTGLGMRKMDPLR 486          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.230e-14
Identity = 44/116 (37.93%), Postives = 62/116 (53.45%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLK 349
            ++C I GY +P  T V +N  AI RD ++W +   F PERF     +  G+  + I FG GRR C G  +A+  + + LA L+  FDWK+ +G   D +D     G T  K  PLK
Sbjct:  377 DECNIGGYKVPQDTIVLINAWAIHRDPELWTEATTFKPERF-----EKKGELEKLIAFGMGRRACPGEGLAIRAISMTLALLIQCFDWKLING---DKIDLAERDGFTLTKLVPLK 484          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.098e-14
Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = 2
Query:   20 GYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG--SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGM-KID 292
            GY IPA++ + VN   +  +   W+KPDEF PERF+   S ++  G +F++IPFG GRR C G  +A+PI+ + +  L+  F+   P G  KID
Sbjct:  388 GYDIPAESKILVNAWWLANNPAHWNKPDEFRPERFLEEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFELLPPPGQSKID 481          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.740e-14
Identity = 46/118 (38.98%), Postives = 62/118 (52.54%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            E C I  Y +P  TT+ VN  AI RD   WD PD F PERF     +   +  + + FG GRR C GS +A  IV LAL +L+  F+W+    +++   D +   G T  K  PLK +
Sbjct:  381 EDCKIGSYDMPRGTTLLVNAWAIHRDPNTWDDPDSFKPERF-----EKEEEAQKLLAFGLGRRACPGSGLAQRIVGLALGSLIQCFEWERVGNVEV---DMKEGVGNTVPKAIPLKAI 490          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.972e-14
Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG--SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHG-MKID 292
            + GY IPA++ + VN   +  + + W KP+EF PERF+   S ++  G +F ++PFG GRR C G  +A+PI+ + +  L+  F+   P G  KID
Sbjct:  385 LGGYDIPAESKILVNAWFLANNPEHWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGKSKID 480          
The following BLAST results are available for this feature:
BLAST of FC929241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
C71AG_ARATH1.453e-1540.17Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C93B1_GLYEC1.898e-1538.66Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C82A2_SOYBN1.898e-1538.33Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C89A2_ARATH3.237e-1539.20Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CY... [more]
C78A3_SOYBN4.227e-1546.59Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
C81F1_ARATH9.417e-1536.52Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C81E1_GLYEC1.230e-1437.93Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
TCMO_PETCR2.098e-1441.49Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
C81D1_ARATH2.740e-1438.98Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_CATRO7.972e-1438.54Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AE01RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AE01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929241 ID=FC929241; Name=FC929241; organism=Citrus clementina; type=EST; length=602bp
AGAAAAGTGCGTTATCGATGGTTATCACATACCAGCTAAGACAACGGTTT
TCGTTAATGTGCTGGCAATAGGAAGGGACGGCCAAGTTTGGGATAAACCC
GACGAATTTATTCCTGAGAGATTTGTGGGCTCTAATATTGATATGGGAGG
GCAAAACTTTGAATTTATTCCATTTGGTGCCGGTAGAAGAATTTGTGCAG
GATCACCTATAGCAATGCCGATTGTGGAGCTTGCACTTGCCAATCTTCTT
TACAAATTTGATTGGAAAATGCCTCATGGAATGAAGATTGATGACTTGGA
CTTTGAGGCTACGCCTGGTCTTACCCAGCACAAGAAAAAGCCTCTCAAGC
TCGTGGCAACCAAATCTATATGATGGTTTAGTCATTAGTGTCGTGATTTA
AAATAAGTTTGCATGCAAGCACTTTTCTTTACGGTTATTGTTTGTTCGAG
GATCATAATATGTAACGGTGAGGGGTGCTACCCAGCTCTCTTTTAAAGCC
AAAGCTCATAATGCTTTTCTAGCTAGATTGCTTTTGCTTTTTGTTTCTTT
TAGTGATTTAATAAAATTTTAGCCCAATTGAAATCAAAAAAAAAAAAAAA
AA
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