FC929241

Overview
NameFC929241
Unique NameFC929241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length602
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 9.700e-28
Identity = 57/114 (50.00%), Postives = 80/114 (70.18%), Query Frame = 2
Query:   20 GYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            GY + + T V +N  AIGRD  VW++ + F+PERF+ ++ID  G +FE IPFG+GRR C G+  A  I ELALA L++KFD+K+P+G++++DLD     G T HKK PL +V T
Sbjct:  392 GYDVASGTRVLINCWAIGRDSSVWEESETFLPERFLETSIDYRGMHFELIPFGSGRRGCPGATFAAAIDELALATLVHKFDFKLPNGVRVEDLDMSEGSGFTIHKKFPLLVVPT 505          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.655e-27
Identity = 62/114 (54.39%), Postives = 76/114 (66.67%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            I GY+IP+KT + VNV +IGRD + W  P+EF PERF+   ID  G +FE +PFG+GRRIC G   A+  VEL L NLLY FDW++P   K  DLD E    +T  KK PLKLV
Sbjct:  382 IQGYNIPSKTILLVNVWSIGRDPKHWKNPEEFNPERFIDCPIDYKGNSFEMLPFGSGRRICPGIAFAIATVELGLLNLLYHFDWRLPEEDK--DLDMEEAGDVTIIKKVPLKLV 493          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.822e-27
Identity = 59/120 (49.17%), Postives = 76/120 (63.33%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            E+C ++GY IP K  + +NV ++GR+   W+KP+ F PERF   + D  G +FEFIPFGAGRRIC G    +  VE+ LA LLY FDWK+  GMK  D+D     GLT  +K  L LV T
Sbjct:  372 EECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGIRKNNLLLVPT 491          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.822e-27
Identity = 59/120 (49.17%), Postives = 76/120 (63.33%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            E+C ++GY IP K  + +NV ++GR+   W+KP+ F PERF   + D  G +FEFIPFGAGRRIC G    +  VE+ LA LLY FDWK+  GMK  D+D     GLT  +K  L LV T
Sbjct:  372 EECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGIRKNNLLLVPT 491          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.822e-27
Identity = 56/114 (49.12%), Postives = 75/114 (65.79%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            I GY IP KT + +N+ +I RD ++W  PDEF P+RF+ S+ID  G NFE +PFG+GRRIC G  + +  VEL L NLLY FDW +P G  + D++ E T  +   KK  L+LV
Sbjct:  386 IQGYDIPVKTQMMINIYSIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDWVVPVGKNVKDINLEETGSIIISKKTTLELV 499          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.814e-27
Identity = 57/118 (48.31%), Postives = 76/118 (64.41%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            + C I+GYHIPAK+ V VN  AIGRD ++W + + F PERF+  +I+    +FEFIPFGAGRR+C G    +  VE  LA L+Y FDWK+P G K +DL      G+T  +K  L L+
Sbjct:  373 QACEINGYHIPAKSRVIVNAWAIGRDPRLWTEAERFYPERFIERSIEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKLPKGTKNEDLGMTEIFGITVARKDDLYLI 490          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.212e-27
Identity = 59/123 (47.97%), Postives = 81/123 (65.85%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG---SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            + C IDGY+IP  T + VN+ AIGRD  VW+ P EFIPERF+    + I+  G +FE IPFGAGRRICAG+ + + +VE  L  L++ FDWK+P+   + D++ E T GL   K  PL+ + T
Sbjct:  379 DACTIDGYYIPKNTRLSVNIWAIGRDPDVWENPLEFIPERFLSEKNAKIEHRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLIHSFDWKLPN--DVVDINMEETFGLALQKAVPLEAIVT 499          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.212e-27
Identity = 60/123 (48.78%), Postives = 81/123 (65.85%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG---SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            E C++DGY+IP  T + VN+ AIGRD QVW+ P EF PERF+    S ID  G +FE IPFGAGRRICAG+ + + +VE  L  L++ FDWK+P   ++ +L+ E   GL   K  PL+ + T
Sbjct:  376 EPCIVDGYYIPKNTRLSVNIWAIGRDPQVWENPLEFNPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLP--SEVIELNMEEAFGLALQKAVPLEAMVT 496          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.073e-26
Identity = 59/123 (47.97%), Postives = 81/123 (65.85%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG---SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            E C++DGY+IP  T + VN+ AIGRD +VW+ P EF PERF+    S ID  G +FE IPFGAGRRICAG+ + + +VE  L  L++ FDWK+P   ++ +L+ E   GL   K  PL+ + T
Sbjct:  376 EPCIVDGYYIPKNTRLSVNIWAIGRDPEVWENPLEFYPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLP--SEVIELNMEEAFGLALQKAVPLEAMVT 496          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.401e-26
Identity = 58/120 (48.33%), Postives = 75/120 (62.50%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            E+C ++GY IP K  + +NV ++GR+   W+KP+ F PERF   + D  G +FEFIPFGAGRRIC G    +  VE+ LA LLY FDWK+  GM   D+D     GLT  +K  L LV T
Sbjct:  375 EECEVNGYTIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGNDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMNPSDMDMSEAEGLTGIRKNNLLLVPT 494          
The following BLAST results are available for this feature:
BLAST of FC929241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
C71A6_NEPRA9.700e-2850.00Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71BO_ARATH1.655e-2754.39Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C7D95_MENSP2.822e-2749.17Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR2.822e-2749.17Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71B7_ARATH2.822e-2749.12Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71D9_SOYBN4.814e-2748.31Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C75A2_SOLME8.212e-2747.97Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C75A1_PETHY8.212e-2748.78Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C75A3_PETHY1.073e-2647.97Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C71DD_MENPI1.401e-2648.33Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH2AE01RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AE01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929241 ID=FC929241; Name=FC929241; organism=Citrus clementina; type=EST; length=602bp
AGAAAAGTGCGTTATCGATGGTTATCACATACCAGCTAAGACAACGGTTT
TCGTTAATGTGCTGGCAATAGGAAGGGACGGCCAAGTTTGGGATAAACCC
GACGAATTTATTCCTGAGAGATTTGTGGGCTCTAATATTGATATGGGAGG
GCAAAACTTTGAATTTATTCCATTTGGTGCCGGTAGAAGAATTTGTGCAG
GATCACCTATAGCAATGCCGATTGTGGAGCTTGCACTTGCCAATCTTCTT
TACAAATTTGATTGGAAAATGCCTCATGGAATGAAGATTGATGACTTGGA
CTTTGAGGCTACGCCTGGTCTTACCCAGCACAAGAAAAAGCCTCTCAAGC
TCGTGGCAACCAAATCTATATGATGGTTTAGTCATTAGTGTCGTGATTTA
AAATAAGTTTGCATGCAAGCACTTTTCTTTACGGTTATTGTTTGTTCGAG
GATCATAATATGTAACGGTGAGGGGTGCTACCCAGCTCTCTTTTAAAGCC
AAAGCTCATAATGCTTTTCTAGCTAGATTGCTTTTGCTTTTTGTTTCTTT
TAGTGATTTAATAAAATTTTAGCCCAATTGAAATCAAAAAAAAAAAAAAA
AA
back to top