FC929241

Overview
NameFC929241
Unique NameFC929241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length602
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 1.829e-26
Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWD-KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVATK 364
            I GY IPA TTV VN  A+ RD + W   PDEF PERF+   +D  G ++EFIPFG+GRR+C G  +   ++E+  ANLL  F++K+P+GMK DD++ +   GL  HK + LKLV  K
Sbjct:  381 IAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVPEK 498          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.121e-26
Identity = 57/123 (46.34%), Postives = 79/123 (64.23%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG---SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            E C +DG+HIP  T + VN+ AIGRD +VW+ P +F PERF+    + ID  G +FE IPFGAGRRICAG+ +    VE  L  L++ FDWK+P G  + +++ E + G+   KK PL  + T
Sbjct:  393 EACEVDGFHIPKNTRLIVNIWAIGRDPKVWENPLDFTPERFLSEKHAKIDPRGNHFELIPFGAGRRICAGARMGAASVEYILGTLVHSFDWKLPDG--VVEVNMEESFGIALQKKVPLSAIVT 513          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.323e-26
Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            I GY +P KT + VN+ A+     +W  P+ F PERF+ +  D  G NFE +PFG+GRR+C G  + + +V L L NLLY+FDWK+P+GMK ++L  E   GL   KK PL+ +
Sbjct:  376 IAGYDVPEKTWIHVNMWAVHMSPSIWKDPETFNPERFIDNQTDFKGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKLPNGMKAEELSIEENYGLICVKKLPLEAI 489          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 6.952e-26
Identity = 57/114 (50.00%), Postives = 72/114 (63.16%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            I GY IP K  + VN  +IGRD + W  P+EF PERF+   +D  G +FE +PFG+GRRIC G  +A+  +EL L NLLY FDW MP   K  D+D E    LT  KK PL+L+
Sbjct:  386 IQGYDIPQKRALLVNAWSIGRDPESWKNPEEFNPERFIDCPVDYKGHSFELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPEKKK--DMDMEEAGDLTVDKKVPLELL 497          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.079e-26
Identity = 59/119 (49.58%), Postives = 72/119 (60.50%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVATKSI 370
            I GY I   T + VN  AIGR+  VW  PDEFIPERFV SN++  G +FE +PFG+GRR C    + +  VE  LANLLY FDWK       +++  E  PGLT H+K PL LV    I
Sbjct:  386 IKGYDIYPGTRIHVNAWAIGRNPDVWKDPDEFIPERFVDSNVETKGTSFELLPFGSGRRGCPAMYVGLSTVEYTLANLLYHFDWK-----ATEEVSVEEAPGLTSHRKHPLHLVPVNVI 499          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.549e-25
Identity = 54/115 (46.96%), Postives = 73/115 (63.48%), Query Frame = 2
Query:   20 GYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVATK 364
            GY +P  T V +N  AIGRD   WD+P++F PERF+ S++D  G +FE IPFGAGRR C G+   M  +E  LANL+ KFDW++PH  +  +LD    PG+   +  PL  + TK
Sbjct:  389 GYDVPVGTMVMINAWAIGRDPTSWDEPEKFRPERFLNSSVDFKGLDFELIPFGAGRRGCPGTTFPMATLEFTLANLMQKFDWELPHECR--ELDMSERPGVAIRRVIPLLAIGTK 501          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.023e-25
Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVATK 364
            I G+ +P  T V VNV AIGRD  VW+ P +F PERF+    D+ G++FE IPFG+GRR+C G  +A+  + + LA+LLY FDWK+ +G+   ++D   T GLT HK K L  V  K
Sbjct:  391 IMGFLVPKNTQVVVNVWAIGRDASVWENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGNIDMSETFGLTLHKAKSLCAVPVK 507          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.023e-25
Identity = 55/114 (48.25%), Postives = 75/114 (65.79%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            I GY IP KT + V+  ++GRD + W  P+EF PERF+   +D  G +FEF+PFG+GRR C G   A+  +EL L NLLY FDWK+P  MK  D++ E +  +T  KK PL+L+
Sbjct:  385 IQGYDIPRKTLLLVSAWSLGRDPKYWKNPEEFNPERFIDCPVDYKGHSFEFLPFGSGRRFCPGMASAIATIELTLLNLLYFFDWKLPEEMK--DMNMEESGDVTIVKKVPLELL 496          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.642e-25
Identity = 51/116 (43.97%), Postives = 76/116 (65.52%), Query Frame = 2
Query:   20 GYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVATKS 367
            GY +P  T V VN  AIGRD + WD P  F PERF+GS ID+ GQ++  IPFGAGRR+C G P+   ++  AL +LL +F+W++P G+    ++ + + G+T  K+  LK++  K+
Sbjct:  390 GYDVPKDTQVLVNAWAIGRDPECWDDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWELPDGVSPKSINMDGSMGVTARKRDSLKVIPKKA 505          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.642e-25
Identity = 51/88 (57.95%), Postives = 67/88 (76.14%), Query Frame = 2
Query:   11 VIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMP 274
            VI GYHIPAKT VF+N  AIGRD + W+  +EF+PERFV +++D  GQ+F+ IPFGAGRR C G    +  VE++LANLLY F+W++P
Sbjct:  382 VIRGYHIPAKTRVFINAWAIGRDPKSWENAEEFLPERFVNNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWELP 469          
The following BLAST results are available for this feature:
BLAST of FC929241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
C83A1_ARATH1.829e-2649.15Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C75A6_CAMME3.121e-2646.34Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71B1_THLAR5.323e-2645.61Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71B4_ARATH6.952e-2650.00Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71B6_ARATH9.079e-2649.58Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71A8_MENPI1.549e-2546.96Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C76C3_ARATH2.023e-2547.86Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C71BP_ARATH2.023e-2548.25Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C76A2_SOLME2.642e-2543.97Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C71A1_PERAE2.642e-2557.95Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AE01RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AE01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929241 ID=FC929241; Name=FC929241; organism=Citrus clementina; type=EST; length=602bp
AGAAAAGTGCGTTATCGATGGTTATCACATACCAGCTAAGACAACGGTTT
TCGTTAATGTGCTGGCAATAGGAAGGGACGGCCAAGTTTGGGATAAACCC
GACGAATTTATTCCTGAGAGATTTGTGGGCTCTAATATTGATATGGGAGG
GCAAAACTTTGAATTTATTCCATTTGGTGCCGGTAGAAGAATTTGTGCAG
GATCACCTATAGCAATGCCGATTGTGGAGCTTGCACTTGCCAATCTTCTT
TACAAATTTGATTGGAAAATGCCTCATGGAATGAAGATTGATGACTTGGA
CTTTGAGGCTACGCCTGGTCTTACCCAGCACAAGAAAAAGCCTCTCAAGC
TCGTGGCAACCAAATCTATATGATGGTTTAGTCATTAGTGTCGTGATTTA
AAATAAGTTTGCATGCAAGCACTTTTCTTTACGGTTATTGTTTGTTCGAG
GATCATAATATGTAACGGTGAGGGGTGCTACCCAGCTCTCTTTTAAAGCC
AAAGCTCATAATGCTTTTCTAGCTAGATTGCTTTTGCTTTTTGTTTCTTT
TAGTGATTTAATAAAATTTTAGCCCAATTGAAATCAAAAAAAAAAAAAAA
AA
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