FC929241

Overview
NameFC929241
Unique NameFC929241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length602
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.603e-22
Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFV---GSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL 346
            ++GY+IP  T + VN+ AIGRD  VW D P+EF PERF+    + ID  G +FE IPFGAGRRICAG+ + + +VE  L  L++ FDWK+  G   D+L+ + T GL   K  PL
Sbjct:  389 VNGYYIPKGTRLNVNIWAIGRDPSVWGDNPNEFDPERFLYGRNAKIDPRGNHFELIPFGAGRRICAGTRMGILLVEYILGTLVHSFDWKL--GFSEDELNMDETFGLALQKAVPL 501          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.603e-22
Identity = 51/117 (43.59%), Postives = 74/117 (63.25%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKL 352
            E+C I GY IP+K+ V VN  AIGRD   W +P++F P+RF+ S +D  G +FE++PFG GRRIC G   A+  +EL LA LL+ FDW+       + L+ + + G+T  ++  L L
Sbjct:  372 EQCKIKGYTIPSKSRVIVNAWAIGRDPNYWIEPEKFNPDRFLESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQ----SNTEKLNMKESRGVTVRREDDLYL 484          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.603e-22
Identity = 54/118 (45.76%), Postives = 74/118 (62.71%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGS----NIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            IDGY +PA T V V+  A+GRD   W+KP+EF+PERFV      ++ M G++  FIPFG+GRRIC G       +E+ LANL+Y FDW++P       +  E + GLT  +K+ L LV
Sbjct:  416 IDGYFVPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPGSGA--GVSMEESFGLTLRRKEKLLLV 531          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.734e-22
Identity = 51/123 (41.46%), Postives = 78/123 (63.41%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV---GSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            + C ++G++IP  T + VN+ AIGRD  +W+ P+EF P+RF+    + ID  G +FE IPFGAGRRICAG+ + + +VE  L  L++ FDW++P    + +L+ +   GL   K  PL  + T
Sbjct:  380 QACEVNGHYIPKGTRLSVNIWAIGRDPSLWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFDWELP--SSVIELNMDEPFGLALQKAVPLAAMVT 500          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.570e-22
Identity = 49/125 (39.20%), Postives = 71/125 (56.80%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSN-------IDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            E C + G+ +   T V VN  A+ R  + W  P+EF PERF   +       +D  G  FE+IPFG+GRR+C G+   +  +EL +A LLY FDW +P GM+ ++LD +   G T  ++  L LV
Sbjct:  382 ETCDVGGFEVTKGTKVIVNAWALARSPERWHDPEEFRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTFGLAALELMVARLLYYFDWSLPDGMRPEELDMDTVVGSTMRRRNHLHLV 506          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.954e-22
Identity = 51/119 (42.86%), Postives = 71/119 (59.66%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG----SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL 346
            E C I+GYHIP  +T+  N+ AI RD   W  P  F PERF+     S +D+ G +FE IPFGAGRRICAG  + +  ++   A L+  FDW++  G+  + L+ E + GLT  +  PL
Sbjct:  377 ESCEINGYHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTPEKLNMEESYGLTLQRAVPL 495          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.954e-22
Identity = 51/123 (41.46%), Postives = 78/123 (63.41%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV---GSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            + C ++G++IP  T + VN+ AIGRD  VW+ P+EF P+RF+    + ID  G +FE IPFGAGRRICAG+ + + +VE  L  L++ F W++P    + +L+ + + GL   K  PL  + T
Sbjct:  380 QACEVNGHYIPKGTRLSVNIWAIGRDPSVWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFVWELP--SSVIELNMDESFGLALQKAVPLAAMVT 500          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.039e-21
Identity = 56/126 (44.44%), Postives = 77/126 (61.11%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV--GSN-IDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVATKSI 370
            +  V+ GY IPAKT +FVNV AIGRD   W+KP EF PERF+  G N +D+ GQ++ FIPFG+GRR C G+ +A  +V + LA ++  F WK+  G     +D E   G+T  +  P+  V    I
Sbjct:  380 KSAVVCGYDIPAKTRLFVNVWAIGRDPNHWEKPFEFRPERFIRDGQNQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAIIIQCFQWKLVGGN--GKVDMEEKSGITLPRANPIICVPVPRI 503          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.772e-21
Identity = 52/119 (43.70%), Postives = 72/119 (60.50%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSN----IDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL 346
            E C I+GY IP  +T+ +NV AI RD   W  P EF PERF+       +D+ G +FE IPFGAGRRICAG  + + +V+L +A L++ F+W +  G   + L+ E   GLT  +  PL
Sbjct:  379 ESCEINGYFIPKGSTLLLNVWAIARDPNAWADPLEFRPERFLPGGEKPKVDVRGNDFEVIPFGAGRRICAGMNLGIRMVQLMIATLIHAFNWDLVSGQLPEMLNMEEAYGLTLQRADPL 497          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.772e-21
Identity = 53/115 (46.09%), Postives = 73/115 (63.48%), Query Frame = 2
Query:   11 VIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG---SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL 346
            V+ GY IPAKT +FVNV AIGRD   W+ P EF PERF     S +D+ GQ++ FIPFG+GRR C G+ +A+ IV + LA ++  F WK  +G   + +D E   G+T  +  P+
Sbjct:  376 VVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNGN--NKVDMEEKSGITLPRAHPI 488          
The following BLAST results are available for this feature:
BLAST of FC929241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
C75A4_GENTR1.603e-2248.70Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71DC_CATRO1.603e-2243.59Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71C2_MAIZE1.603e-2245.76Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C75A5_EUSGR2.734e-2241.46Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C99A1_SORBI3.570e-2239.20Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
F3PH_ARATH7.954e-2242.86Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C75A7_EUSGR7.954e-2241.46Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C93A1_SOYBN1.039e-2144.44Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
F3PH_PETHY1.772e-2143.70Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C93A2_SOYBN1.772e-2146.09Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AE01RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AE01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929241 ID=FC929241; Name=FC929241; organism=Citrus clementina; type=EST; length=602bp
AGAAAAGTGCGTTATCGATGGTTATCACATACCAGCTAAGACAACGGTTT
TCGTTAATGTGCTGGCAATAGGAAGGGACGGCCAAGTTTGGGATAAACCC
GACGAATTTATTCCTGAGAGATTTGTGGGCTCTAATATTGATATGGGAGG
GCAAAACTTTGAATTTATTCCATTTGGTGCCGGTAGAAGAATTTGTGCAG
GATCACCTATAGCAATGCCGATTGTGGAGCTTGCACTTGCCAATCTTCTT
TACAAATTTGATTGGAAAATGCCTCATGGAATGAAGATTGATGACTTGGA
CTTTGAGGCTACGCCTGGTCTTACCCAGCACAAGAAAAAGCCTCTCAAGC
TCGTGGCAACCAAATCTATATGATGGTTTAGTCATTAGTGTCGTGATTTA
AAATAAGTTTGCATGCAAGCACTTTTCTTTACGGTTATTGTTTGTTCGAG
GATCATAATATGTAACGGTGAGGGGTGCTACCCAGCTCTCTTTTAAAGCC
AAAGCTCATAATGCTTTTCTAGCTAGATTGCTTTTGCTTTTTGTTTCTTT
TAGTGATTTAATAAAATTTTAGCCCAATTGAAATCAAAAAAAAAAAAAAA
AA
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