FC929241

Overview
NameFC929241
Unique NameFC929241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length602
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.314e-21
Identity = 48/116 (41.38%), Postives = 70/116 (60.34%), Query Frame = 2
Query:   23 YHIPAKTTVFVNVLAIGRDGQVWDKPDE-FIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVATKS 367
            YHIPA T V +N  AIGR+   W    E F PER + S++D  G NFE IPFGAGRRIC     A+ ++E+ LANL++++DW++P     D  +   + G+  H+  PL  + + +
Sbjct:  374 YHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLNSSVDFRGHNFELIPFGAGRRICPAISFAVILIEVTLANLVHRYDWRLPEEYIEDQTNVAESTGMVIHRLFPLYAIVSST 489          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.559e-20
Identity = 50/120 (41.67%), Postives = 71/120 (59.17%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSN--IDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            E C++ GYHI   T +  N+  I RD  VW  P EF PERF+ ++  +D+ G NFE +PFG+GRR+CAG  + + +V   LANLL+ FD   P    +D  +F    G T  K  PL+++
Sbjct:  398 ENCILGGYHIKKGTRLIHNLWKIHRDPSVWSDPLEFKPERFLTTHKDVDLRGHNFELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDILNPSAEPVDMTEFF---GFTNTKATPLEIL 514          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.342e-20
Identity = 53/116 (45.69%), Postives = 68/116 (58.62%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWD-KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL 346
            E   + GY I A T V +N  AI RD   W    +EF PER + S +D  G NFEFIPFG+GRRIC G   AM +VE+ LANL+ +F+W+M      D+ D   + GL   +K PL
Sbjct:  375 EDIKLKGYDIAAGTQVIINAWAIQRDTMTWGIDAEEFRPERHLDSLVDFRGTNFEFIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMEVQHSGDEYDLAESTGLDVCRKFPL 490          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 9.723e-20
Identity = 47/116 (40.52%), Postives = 70/116 (60.34%), Query Frame = 2
Query:   23 YHIPAKTTVFVNVLAIGRDGQVWDKP-DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVATKS 367
            +HIPA T V +N  AIGR+   W    +EF PER + S++D  GQ FE IPFG+GRRIC     A+ + E+ LANL+++FDW++      D  +   + G+  H+  PL  +A+ +
Sbjct:  373 HHIPAGTQVLINAWAIGREAATWGPDVEEFRPERHLDSSVDYRGQAFELIPFGSGRRICPAISFAVVLNEVVLANLVHRFDWRLSVESTEDQTEVAESTGIAIHRMFPLYAIASNT 488          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.270e-19
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 2
Query:    5 KCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV---GSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVATKSI 370
            + V+ GY IPAKT +FVNV AIGRD   W+ P EF PERFV    S +D+ GQ++  +PFG+GRR C G+ +A+ +V + LA L+  F WK+        ++ E   G+T  +  P+  V  + +
Sbjct:  382 RAVVCGYDIPAKTRLFVNVWAIGRDPNHWENPLEFRPERFVENGKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVVHVNLAVLIQCFQWKV--DCDNGKVNMEEKAGITLPRAHPIICVPIRRL 504          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 1.658e-19
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 2
Query:   23 YHIPAKTTVFVNVLAIGRDGQVWDKP-DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            YHIPA T V +N  AIGR+   W    +EF PER + S +D  GQ+ E +PFGAGRRIC     A+ + E+ LANL+++FDW +P        D   + G+  H+  PL  + T
Sbjct:  375 YHIPAGTHVMINAWAIGREAATWGPDAEEFRPERHLNSYVDYRGQDTELVPFGAGRRICPAISFAVVLDEVVLANLVHQFDWTLPEESTEYQTDVAESTGMAVHRMFPLFAMTT 488          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 3.695e-19
Identity = 50/116 (43.10%), Postives = 68/116 (58.62%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP-DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL 346
            E   + GY I A T V +N  +I RD  +W    +EF PER + S +D  GQ+ ++IPFG+GRRIC G  +AM +VE+ LANL+ +FDW +  G   D  D     GL   +K PL
Sbjct:  374 EDVKVKGYDIAAGTEVLINAWSIHRDPAIWGPDAEEFKPERHLDSTLDYHGQDLKYIPFGSGRRICPGINLAMGLVEVTLANLVGRFDWSVDPGPNGDQPDLAEDFGLDVCRKNPL 489          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.695e-19
Identity = 50/112 (44.64%), Postives = 66/112 (58.93%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWD-KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL 346
            + GY I A T V  N  AI RD   W    +EF PER + S +D  G NFE+IPFG+GRRIC G   AM +VE+ LANL+ +F+W+M   +  D+ D     G+   +K PL
Sbjct:  378 LKGYDIAAGTQVITNAWAIQRDIVTWGIDAEEFRPERHLDSPLDFRGTNFEYIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMDARLSGDEYDLAEATGIDVCRKFPL 489          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.404e-18
Identity = 49/116 (42.24%), Postives = 68/116 (58.62%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP-DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL 346
            E   + GY+I A T V +N  AI RD  +W    +EF PER + S +D  G++  FIPFG+GRRIC G  +A+ +VE+ +ANL+ +FDW+   G   D  D     GL   +K PL
Sbjct:  374 EDVKVKGYNIAAGTEVIINAWAIQRDPAIWGPDAEEFKPERHLDSTLDYHGKDLNFIPFGSGRRICPGINLALGLVEVTVANLVGRFDWRAEAGPNGDQPDLTEAFGLDVCRKFPL 489          
BLAST of FC929241 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.834e-18
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP-DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL 346
            E   + GY+I A T V +N  AI RD  +W    +EF PER + S +D  G+N  +IPFG+GRRIC G  +A+ + E+ +ANL+ +FDW++  G   D  D     G+   +K PL
Sbjct:  374 EDVKVKGYNIAAGTEVIINAWAIQRDTAIWGPDAEEFKPERHLDSGLDYHGKNLNYIPFGSGRRICPGINLALGLAEVTVANLVGRFDWRVEAGPNGDQPDLTEAIGIDVCRKFPL 489          
The following BLAST results are available for this feature:
BLAST of FC929241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
C71AM_ARATH2.314e-2141.38Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C82A3_SOYBN2.559e-2041.67Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C71AE_ARATH3.342e-2045.69Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71AQ_ARATH9.723e-2040.52Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C93A3_SOYBN1.270e-1940.80Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71AO_ARATH1.658e-1942.11Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH3.695e-1943.10Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71AF_ARATH3.695e-1944.64Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH1.404e-1842.24Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH1.834e-1840.52Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AE01RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AE01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929241 ID=FC929241; Name=FC929241; organism=Citrus clementina; type=EST; length=602bp
AGAAAAGTGCGTTATCGATGGTTATCACATACCAGCTAAGACAACGGTTT
TCGTTAATGTGCTGGCAATAGGAAGGGACGGCCAAGTTTGGGATAAACCC
GACGAATTTATTCCTGAGAGATTTGTGGGCTCTAATATTGATATGGGAGG
GCAAAACTTTGAATTTATTCCATTTGGTGCCGGTAGAAGAATTTGTGCAG
GATCACCTATAGCAATGCCGATTGTGGAGCTTGCACTTGCCAATCTTCTT
TACAAATTTGATTGGAAAATGCCTCATGGAATGAAGATTGATGACTTGGA
CTTTGAGGCTACGCCTGGTCTTACCCAGCACAAGAAAAAGCCTCTCAAGC
TCGTGGCAACCAAATCTATATGATGGTTTAGTCATTAGTGTCGTGATTTA
AAATAAGTTTGCATGCAAGCACTTTTCTTTACGGTTATTGTTTGTTCGAG
GATCATAATATGTAACGGTGAGGGGTGCTACCCAGCTCTCTTTTAAAGCC
AAAGCTCATAATGCTTTTCTAGCTAGATTGCTTTTGCTTTTTGTTTCTTT
TAGTGATTTAATAAAATTTTAGCCCAATTGAAATCAAAAAAAAAAAAAAA
AA
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